Dkan013976.1
Basic Information
- Insect
- Drosophila kanapiae
- Gene Symbol
- nfxl1
- Assembly
- GCA_008042475.1
- Location
- VNJM01000302.1:382438-385524[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 1.9e+04 -8.1 6.4 15 19 148 152 147 152 0.82 2 20 0.13 1.2e+03 -0.3 0.4 4 10 183 189 182 189 0.95 3 20 6.5e-08 0.0006 19.8 15.5 1 18 197 213 197 214 0.98 4 20 0.21 1.9e+03 -1.0 1.7 5 10 239 244 239 244 0.91 5 20 1.2e-08 0.00011 22.2 16.5 1 19 250 269 250 269 0.97 6 20 0.28 2.6e+03 -1.4 1.3 5 10 293 298 293 298 0.94 7 20 2e-06 0.018 15.1 13.6 1 19 304 324 304 331 0.94 8 20 0.89 8.2e+03 -3.0 0.5 1 7 348 353 347 355 0.49 9 20 2.1e-08 0.00019 21.4 15.3 1 19 358 376 358 376 0.99 10 20 0.7 6.5e+03 -2.7 0.4 1 5 385 389 385 394 0.73 11 20 2 1.9e+04 -5.0 2.3 5 10 399 404 399 404 0.91 12 20 0.0016 15 5.8 16.0 1 18 410 427 410 428 0.97 13 20 3.3e-08 0.00031 20.7 14.7 1 19 437 455 431 455 0.90 14 20 0.006 55 4.0 6.8 9 19 500 510 498 510 0.89 15 20 0.0078 72 3.6 7.1 1 12 522 532 522 532 0.96 16 20 0.32 3e+03 -1.6 0.9 6 10 586 590 585 590 0.90 17 20 4.8e-06 0.044 13.9 5.1 1 11 596 606 596 607 0.97 18 20 0.67 6.2e+03 -2.6 15.1 4 18 637 651 635 652 0.92 19 20 1.6 1.5e+04 -3.8 1.4 8 13 657 662 656 662 0.73 20 20 6.6e-07 0.0062 16.6 10.8 1 16 703 717 703 723 0.92
Sequence Information
- Coding Sequence
- atggaaaagttcaACAAGGCGCAAGCAAAACACCTCGCAGCCGCCCAGAAAGTAGTGGACACCTACGCCTCCAGCTCCGAGGATGAAGGCGAACTGGACGAGAAGCATATTTTGGATCTGCTCTACAAGCACTACAAGCCCGCGGAGTCGGGTAGCTCCAAGGATGCGGCAGCCCGCACTAGCACATTCCTGGAGAACACCCTGCACTCTGGAGCGGCCACTTGCCTCATTTGCATCGGCAGCATCCGACGCGTGGAGGCGATCTGGTCGTGCGAGAGTTGCTACTGCTTCTTCCACCTTAACTGCATCCAGCGCTGGGCCAACGACAGCATGATGCAGATGAAGGTCAAGGCGGCGGAGCAACAGAACAACGGCCAGGGCCACTACAATCATCTGGGCGAATTTGTGCCGCCGAAGCGACAGAAATCTCTTCACTGGTGCTGCCCCCAGTGCCGCAGGGACTATCAGCCGGCGGACAAGCCCACGCAATACAACTGCTTCTGTGGCAAGGAGGCGAATCCTCCGTCACAACCGTTCCTAGTGCCCCATTCGTGTGGCGAGATCTGCGGTAAGCTGCTGCAGCCAAAATGTGGACACGACTGCAAGCTGCTGTGTCATCCCGGGCCATGTCCGCCTTGTGCCCAGCAGGCGCAGGTCTCCTGCTTGTGCGGGAAGTCCAGTCCCCGTTCCATGAGGTGCATCGACAAGCAGTGGCGATGCCAGCAGCCGTGCAAGGGTCTGTTGGCGTGCGGGAAACACAAGTGCAACCAGGTATGTCATCGCCCAGGACAATGCCCACCGTGCACCAGCAAGAGTCTACAGCCGTGCGAGTGTCAACGCGAGTCCAAGATGGTTAACTGCTCCGATCGCCAATGGAAGTGTCAGAATGTATGTGGAGCTCCATTTGCCTGCGGCCTGCACATCTGTGAGAAAACTTGCCATGGCGGACCCTGCGGCGACGGCGAGTGTCCCTTGCAAGTCCGGAGTTGTCCCTGCGGCAAGAATacCCAAATTAGGCCCTGCAATGAGGCAGAGGAAACTTGCGGTGATACCTGCCAAAAGCTATTGTCCTGCGGCCAGCATACTTGCACCCAGCGTTGCCATCGCGGTCCCTGCATCTCGTGCCCAGTAAgaaccaaaaagaaatgccGCTGTGGCCTCCATGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCACCTGTGAGACTAAATGCAAGCAGATCCGTGACTGTGGCAAGCATGCCTGTAATCGAAAGTGCTGCGGGGATCAGTGTTCGCCCTGCGAGAAGATTTGCGGCAAGCAGCTGAGCTGCAACAAGCACAAGTGCCAGTCCGTCTGCCACAATGGACCCTGTTATCCCTGCAAGCTGGAGTCCCAAATCAATTGTCGTTGTGGCAAAACCAAACGCAGTGTTCCCTGTGGACGGGAGAAGAGTGCACGTATTGTGTGCCTGGAGCTCTGTCGAATATCTTCGAAATGCCACCACGCCATAAAACATCGATGCCACAAGTCCGAGTGTCCGCCTTGTAGCCAGATTTGCGGCCTACCCAACGACAACAGTAAGTGCGGGCACATATGTAAGGCTAAATGCCATGAGGCTGTGCGGGTAAATAAGCCTGGAGATGGCAGACCACAGGCCAAGAAGTACGAGTACAAGGCTCTTCCACATCCGCGCTGCGAAGAGGGAGTCGTTGTCACCTGCATTGGGGGCCATGAAGTGGCCACCTGGCCGTGCTGGAACTCCAAACCCAGCTCCTGTCAGCGCCTGTGTGCCCGTAAGCTCAAGTGCGGCAATCACAAGTGCTCCCTGGTCTGTCACTTAGTGCCGCAGCCCGAGGATATGCAACAGCAGGCTGGGTGTGCAAACTGTGAGGAAGGATGTGCCGTTCCAAGGCCGGCCGGATGCGTTCACGCCTGTCCCAAGGGTTGCCACCCGCCGCCGTGTACAGCCTGCAATTTTGTGATCAAGAACAAGTGCCACTGCGGACTCAATCAGTTGGTGTACAAATGCAGCGAGTATTTCGATGAGACGGGCACGGTTCAGGAGATTGTTGAGCGGCGGGAAAAGTTACGCAGCTGCGGAAACCGCTGCCTTAAGAATTACAATTGCGGACATCGCTGcactgccatttgccattcggGCAAGTGTCCCAATCCCGAGCTATGCCGGAAGAAGGTTCGCATTTTCTGCGCTTGCAAGCGACTCAAGCAGGAAATCGCATGTGACAAGCATCGTGCCGGGCAGACATCCCTGGAGTGCGACTCCAATTGCACGGCAGAGAGATCCCGAGCTCAGGCGGCCGAGCAACAGCATCTGGAGCAGAAGCGACGGAACGAGGAGGAGCGCAACCGATTGGAACTGGAGAAGTTCGAAGCAAAGTTCGGCAAGCGCAAGCACAAGGAACGCAAGACGGTGGACGTGGGACCCGCCAAGACAAAGATCGATTGGCAGCGATACGCCATCTATGCGGTATCGCTGCTCACAGTTGTGGGCGCCATCGCTGTGGCATTCTACGCGGACAGTTAA
- Protein Sequence
- MEKFNKAQAKHLAAAQKVVDTYASSSEDEGELDEKHILDLLYKHYKPAESGSSKDAAARTSTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHLNCIQRWANDSMMQMKVKAAEQQNNGQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPADKPTQYNCFCGKEANPPSQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSSPRSMRCIDKQWRCQQPCKGLLACGKHKCNQVCHRPGQCPPCTSKSLQPCECQRESKMVNCSDRQWKCQNVCGAPFACGLHICEKTCHGGPCGDGECPLQVRSCPCGKNTQIRPCNEAEETCGDTCQKLLSCGQHTCTQRCHRGPCISCPVRTKKKCRCGLHEKELPCSKEFTCETKCKQIRDCGKHACNRKCCGDQCSPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTKRSVPCGREKSARIVCLELCRISSKCHHAIKHRCHKSECPPCSQICGLPNDNSKCGHICKAKCHEAVRVNKPGDGRPQAKKYEYKALPHPRCEEGVVVTCIGGHEVATWPCWNSKPSSCQRLCARKLKCGNHKCSLVCHLVPQPEDMQQQAGCANCEEGCAVPRPAGCVHACPKGCHPPPCTACNFVIKNKCHCGLNQLVYKCSEYFDETGTVQEIVERREKLRSCGNRCLKNYNCGHRCTAICHSGKCPNPELCRKKVRIFCACKRLKQEIACDKHRAGQTSLECDSNCTAERSRAQAAEQQHLEQKRRNEEERNRLELEKFEAKFGKRKHKERKTVDVGPAKTKIDWQRYAIYAVSLLTVVGAIAVAFYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603756;
- 90% Identity
- iTF_00594930;
- 80% Identity
- -