Dpav013065.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila parvula
Gene Symbol
nfxl1
Assembly
GCA_018904695.1
Location
JAEIIG010027476.1:48-3141[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 1.8e+04 -8.1 6.4 15 19 150 154 149 154 0.82
2 20 0.13 1.2e+03 -0.3 0.4 4 10 185 191 184 191 0.95
3 20 6.5e-08 0.00059 19.8 15.5 1 18 199 215 199 216 0.98
4 20 0.21 1.9e+03 -1.0 1.7 5 10 241 246 241 246 0.91
5 20 1.2e-08 0.00011 22.2 16.5 1 19 252 271 252 271 0.97
6 20 0.28 2.5e+03 -1.4 1.3 5 10 295 300 295 300 0.94
7 20 2.9e-07 0.0027 17.7 10.8 1 19 306 326 306 333 0.94
8 20 0.89 8.1e+03 -3.0 0.5 1 7 350 355 349 357 0.49
9 20 2.1e-08 0.00019 21.4 15.3 1 19 360 378 360 378 0.99
10 20 0.7 6.3e+03 -2.7 0.4 1 5 387 391 387 396 0.73
11 20 2 1.8e+04 -5.0 2.3 5 10 401 406 401 406 0.91
12 20 0.0016 15 5.8 16.0 1 18 412 429 412 430 0.97
13 20 3.3e-08 0.0003 20.7 14.7 1 19 439 457 433 457 0.90
14 20 0.0073 66 3.7 6.1 9 18 502 511 500 512 0.90
15 20 0.0078 71 3.6 7.1 1 12 524 534 524 534 0.96
16 20 0.32 2.9e+03 -1.6 0.9 6 10 588 592 587 592 0.90
17 20 4.8e-06 0.043 13.9 5.1 1 11 598 608 598 609 0.97
18 20 0.68 6.1e+03 -2.6 15.1 4 18 639 653 637 654 0.92
19 20 1.7 1.5e+04 -3.9 1.6 8 13 659 664 658 664 0.74
20 20 6.7e-07 0.006 16.6 10.8 1 16 705 719 705 725 0.92

Sequence Information

Coding Sequence
ATGGAAAAGTTCAACAAGGCACAAGCTAAAAACCTTGCAGCCGCCCAAAAAGTGGTGGACACCTACGCCTCCAGCTCCGAGGATGAAGGCGAACTGGACGAGAAGCATATTTTGGATCTGCTCTACAAGCACTACAAGCCCGCAGAGTCGGTAGTGGGTAGCTCCAAGGATGCAGCAGCCCGCACCAGCACATTCCTGGAGAATACCCTGCACTCGGGAGCGGCCACTTGCCTTATTTGCATCGGCAGCATCCGACGCGTGGAGGCGATCTGGTCGTGCGAGAGTTGCTACTGCTTCTTCCATTTGAACTGCATCCAGCGCTGGGCCAACGACAGCATGATGCAGATGAAGGTCAAGGCGGCGGAGCAGCAGAACAACGGCCAGGGCCACTACAATCATCTGGGCGAATTTGTGCCGCCGAAGCGCCAGAAATCTCTTCACTGGTGCTGCCCCCAGTGCCGCAGGGACTACCAGCCGGCGGACAAGCCCACGCAATACAACTGCTTCTGTGGCAAGGAGGCAAATCCCCCGTCACAACCTTTCCTAGTGCCCCATTCGTGTGGCGAGATCTGCGGTAAGCTCCTGCAGCCAAAGTGTGGACACGACTGCAAGCTGCTGTGCCATCCTGGGCCATGTCCGCCTTGTGCCCAGCAGACGCAGGTCTCCTGCTTGTGCGGCAAGTCCAGTCCCCGTTCCATGAGGTGCATCGACAAGCAGTGGCGATGCCAGCAACCGTGCAAGGGTCTGCTGGCGTGCGGGAAACACAAGTGCAACCAGGTGTGTCATCGCCCAGGACAATGCCCACCGTGTACCAGCAAGAGTCTACAGCCGTGTGAGTGTCAACGCGAGTCCAAGATGGTTAACTGCTCCGATCGCAAATGGAAGTGTCAGAATGTATGTGGAGCTCCCTTTGCGTGCGGCCTGCACATCTGTGAGAAAGCTTGCCATGCCGGACCCTGCGGCGACGGCGAGTGTCCCTTGCAAGTCCGTAGTTGTCCCTGCGGCAAGAATACCCAAATTAGGCCCTGCAATGAGGCAGAGGAAACTTGCGGTGATACCTGCCAAAAGCTATTGTCGTGCGGCCAGCATACTTGCACCCAGCGTTGCCATCGCGGTCCCTGCATCTCCTGCCCAGTTAGAACCAAAAAGAAATGCCGCTGTGGCCTCCATGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCACCTGTGAGACAAAATGCAAGCAGATCCGTGATTGTGGCAAGCATGCCTGTAATCGAAAGTGCTGCGGGGACCAGTGTTCGCCTTGCGAGAAGATCTGTGGCAAGCAGCTGAGCTGCAACAAGCACAAGTGCCAGTCCGTCTGCCACAATGGACCCTGTTATCCCTGCAAGCTGGAGTCCCAAATCAATTGTCGTTGTGGCAAAACCAAACGCAGTGTTCCCTGTGGAAGGGAGAAGAGTGCACGTATTGTGTGCCTGGAGCTCTGTCGAATATCTTCAAAATGCCACCACGCTGTAAAACATCGATGCCACAAGTCCGAGTGTCCGCCTTGTGCCCAGATCTGCGGCCTACCCAACGACAACAGTAAGTGCGGGCACATATGTAAGGCTAAATGCCATGAGGCTGTGCGGGTAAATAAGCCTGGAGATGGCAGACCACAGGCCAAGAAGTACGAGTACAAGGCTTTTCCCCATCCGCGCTGCGAAGAGGGAGTCGTTGTCACCTGCATCGGGGGCCATGAAGTGGCCACCTGGCCCTGCTGGAACTCCAAACCCAGCTCCTGTCAGCGCCTGTGTGCCCGGAAGCTCAAGTGCGGCAATCACAAGTGCTCCCTGGTCTGTCACCTAGTGCCGCAGCCGGAGGATATGCAACAGCAGGCTGGCTGTGCAAACTGTGAGGAAGGCTGTGCCGTTCCAAGGCCCGCCGGATGTGTTCACGCCTGTCCCAAGGGCTGCCACCCGCCGCCGTGTACAGCCTGCAATTTTGTGATCAAGAGCAAGTGCCACTGCGGACTCAATCAGTTAGTGTACAAGTGCAGCGAGTATTTCGATGAAACGGGCACGGTTCAGGAGATTGTTGAGCGGCGGGAAAAGTTACGCAGCTGCGGAAACCGCTGCCTGAAGAATTACAATTGCGGACATCGCTGCACTGCCATTTGCCACTCGGGCAAGTGTCCCAATCCGGAGCTATGCCGGAAAAAGGTTCGCATTTTCTGTGCCTGTAAGCGACTCAAGCAGGAAATCGCTTGTGACAAGCATCGTGCTGGGCAGGCATCCCTAGAATGCGACTCCAATTGCACGGCTGAAAGATCCCGAGCCCAGGCGGCCGAGCAACAACATCTGGACCAGAAGCGACGGAACGAGGAGGAGCGCAACCGGTTGGAACTGGAGAAGTTCGAGGCAAAGTTTGGCAAGCGCAAGCACAAGGAACGGAAGACCGTGGACGTGGGACCTGCCAAGACAAAGATCGATTGGCAACGATACGCCATCTATGCTGTATCGCTGCTCACAGTTGTGGGCGCCATCGCTGTGGCATTTTACGCGGACAGTTGA
Protein Sequence
MEKFNKAQAKNLAAAQKVVDTYASSSEDEGELDEKHILDLLYKHYKPAESVVGSSKDAAARTSTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHLNCIQRWANDSMMQMKVKAAEQQNNGQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPADKPTQYNCFCGKEANPPSQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQTQVSCLCGKSSPRSMRCIDKQWRCQQPCKGLLACGKHKCNQVCHRPGQCPPCTSKSLQPCECQRESKMVNCSDRKWKCQNVCGAPFACGLHICEKACHAGPCGDGECPLQVRSCPCGKNTQIRPCNEAEETCGDTCQKLLSCGQHTCTQRCHRGPCISCPVRTKKKCRCGLHEKELPCSKEFTCETKCKQIRDCGKHACNRKCCGDQCSPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTKRSVPCGREKSARIVCLELCRISSKCHHAVKHRCHKSECPPCAQICGLPNDNSKCGHICKAKCHEAVRVNKPGDGRPQAKKYEYKAFPHPRCEEGVVVTCIGGHEVATWPCWNSKPSSCQRLCARKLKCGNHKCSLVCHLVPQPEDMQQQAGCANCEEGCAVPRPAGCVHACPKGCHPPPCTACNFVIKSKCHCGLNQLVYKCSEYFDETGTVQEIVERREKLRSCGNRCLKNYNCGHRCTAICHSGKCPNPELCRKKVRIFCACKRLKQEIACDKHRAGQASLECDSNCTAERSRAQAAEQQHLDQKRRNEEERNRLELEKFEAKFGKRKHKERKTVDVGPAKTKIDWQRYAIYAVSLLTVVGAIAVAFYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00603756;
90% Identity
iTF_00594930;
80% Identity
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