Dser013564.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila serrata
Gene Symbol
nfxl1
Assembly
GCA_002093755.1
Location
NW:270863-274423[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.95 6.8e+03 -3.1 0.4 15 18 92 95 91 96 0.77
2 21 2 1.4e+04 -8.1 6.4 15 19 149 153 148 153 0.82
3 21 0.13 9.2e+02 -0.3 0.4 4 10 184 190 183 190 0.95
4 21 6.5e-08 0.00047 19.8 15.5 1 18 198 214 198 215 0.98
5 21 0.69 4.9e+03 -2.6 1.5 5 10 240 245 240 245 0.91
6 21 1.2e-08 8.3e-05 22.2 16.5 1 19 251 270 251 270 0.97
7 21 0.28 2e+03 -1.4 1.3 5 10 294 299 294 299 0.94
8 21 9.8e-08 0.0007 19.2 9.2 1 19 305 325 305 332 0.94
9 21 0.89 6.4e+03 -3.0 0.5 1 7 349 354 348 356 0.49
10 21 2.1e-08 0.00015 21.4 15.3 1 19 359 377 359 377 0.99
11 21 0.7 5e+03 -2.7 0.4 1 5 386 390 386 395 0.73
12 21 2 1.4e+04 -5.0 2.3 5 10 400 405 400 405 0.91
13 21 0.00036 2.6 7.9 17.2 1 18 411 428 411 429 0.97
14 21 3.3e-08 0.00024 20.7 14.7 1 19 438 456 432 456 0.90
15 21 0.021 1.5e+02 2.2 7.5 9 18 501 510 499 511 0.90
16 21 0.014 99 2.8 6.6 1 12 523 533 523 533 0.96
17 21 0.86 6.2e+03 -2.9 1.4 6 10 587 591 586 591 0.88
18 21 0.00012 0.87 9.4 8.9 1 12 597 608 597 608 0.97
19 21 0.18 1.3e+03 -0.8 16.9 4 18 638 652 636 653 0.93
20 21 2 1.4e+04 -6.8 3.1 10 13 660 663 659 663 0.68
21 21 6.7e-07 0.0048 16.6 10.8 1 16 704 718 704 724 0.92

Sequence Information

Coding Sequence
atggaaaagttcAATAAAGCGCAAGCAAAAAACCTCGCAGCCGCCCAAAAACTAGTGGACACCTATGCCTCCAGCTCCGAAGATGAAGGCGAACTCGACGAGAAGCATATTCTGGATCTGCTCTACAAGCACTACAAGCCATCGGAGACGGTGGGGAGCTCCAAGGATGCAGCGGCCCGCACCAGTACATTCCTGGAGAACACACTACACTCGGGAGCGGCCACTTGCCTCATTTGCATTGGCAGCATCCGACGCGTGGAGGCGATCTGGTCGTGCGGGAGCTGCTACTGCTTCTTTCACCTGAACTGCATTCAGCGCTGGGCCAACGACAGCATGATGCAGATGAAGGTCAAGGCGGCGGAACAGCAGAACAACAGCCAGGGCCACTACAATCATTTGGGGGAGTTTGTGCCACCGAAACGCCAGAAATCCCTTTACTGGTGCTGCCCCCAGTGCCGCCGGGACTATCAGCCCGCGGAGAAGCCGACGCAGTACAACTGCTTCTGCGGCAAGGAGGCGAATCCCCCATCGCAGCCGTTCCTAGTGCCCCATTCATGTGGCGAGATTTGCGGAAAGCTGCTTCAGCCAAAGTGTGGACACGACTGCAAGTTGCTGTGCCATCCGGGGCCATGTCCTCCTTGTGCCCAGCAGGCACCGGTATCTTGCTTGTGCGGCAAATCCAGTCCCCGTTCCATGAGGTGCATCGACAAGCAATGGCGGTGCCAGCAGGCGTGCAAGGATCTGCTGGCCTGCGGGAAACACAAGTGTAATCAGGTATGCCATCGCCCAGGACAATGTCCACCGTGCACCAGCAAAAGCCTGCAGCCGTGCGAATGTCAGCGAGAGTCTAAAATGGTTAACTGCTCCGATCGAAAATGGAAGTGTCAAAATGTATGTGGAGCTCCCTTTGCGTGCGGCCTACACATCTGTGAGAAGGTTTGCCATGCCGGATCCTGCGGCGATGGAGAGTGTCCCCTGCAAGTCCGTAGTTGTCCCTGCGGCAAGAACACTCAAGTTAGGCCCTGTAACGAGGCAGAGGAAACTTGCGGGGATACCTGCCAAAAGCTTTTGTCGTGCGGCCAACACACTTGCACCCAGCGTTGTCATCGCGGTCCCTGCATTTCTTGTCCAGTACGAACCAAAAAGAAGTGTCGCTGCGGTCTGCATGAAAAGGAGCTGCCCTGCTCTAAGGAGTTCACCTGCGAGACCAAATGCAAACAGATTCGGGATTGTGGAAAGCACGCCTGTAACCGAAAGTGCTGCGGAGATCAGTGCCCACCTTGCGAAAAGATCTGCGGTAAGCAGCTGAGCTGCAACAAACACAAATGCCAGTCCGTCTGCCACAACGGACCGTGTTATCCATGCAAGCTGGAGTCCCAAATCAATTGTCGCTGTGGCAAAACCAAACGCAGTGTTCCCTGTGGAAGGGAGAAGAGTGCACGTATTGTGTGCCTGGAGCTCTGTCGAATATCTGCCAAATGCCACCACGCTATAAAGCATCGATGCCACAAGTCCGAGTGTCCGCCTTGTGGTCAGGTCTGCGGTTTACCCAACGACAACAGCAAGTGCGGACACATATGTAAGGCCCGATGCCATGAAGCTGTTCGGGTTAATAAACCAGCAGATGGTCGACCACAGGCCAAGAAGTACGAGTACAAGGCTCTTCCCCATCCCCGGTGCGAAGAAGGCGTGGTTGTCACCTGCATCGGAGGCCATGAAGTGGCCACCTGGCCCTGTTGGAACTCCAAGCCCAGCTCCTGTCAGCGCAAGTGTGCCCGCCAGCTCAAGTGCGGCCATCATAAGTGCTCGCTAGTGTGTCATTCAGTGCCGAATCCAGAGGATATGCAACAGCAGGCTGGCTGTGCTAGCTGTGAAGAAGGTTGTGCCGTTCCAAGGCCTGCCGGTTGTGTTCATGCTTGTCCCAAGGGCTGCCACCCGCCGCCGTGTACTCCCTGTAATTTTGTGATCAAAGGCAAGTGCCACTGCGGACTCAACCAATCGGTGTACAAATGCAGCGAGTATTACGATGAGACAGGCACGGTCCAGGAGATCGTTGAGCGACGAGAAAAGTTACGCAGTTGCGGAAACCGGTGCTTGAAGAATTACAATTGTGGACATCGCTGCACCGCCATTTGTCACTCGGGCAAATGTCCCAATCCTGAGCTATGCCGGAAGAAGGTTCGCATTTACTGCGCTTGCAAGCGACTAAAGCAAGAAATCGCTTGCGACAAGCATCGTGCCGGGCAGACATCCTTGGAATGTGACTTCAATTGCACGGCcgagcgctcccgcgcccagGCGGCCGAGCAACAGCATCTGGAGCAGAAGCGACGACACGAAGAGGAGCGCAACCGTCTGGAACTGGAGAAGTTCGAGGCAAAGTTCGGTAAGCGCAAGCACAAGGAACGAAAGACGGTGGACGTGGGCCCCGCCAAGACAAAGATCGACTGGCAGCGATACGCAATCTACGCGGTATCGCTGCTCACTGTTGTGGGAGCGATCGCTGTGGCATTCTATGCGGAAAGTTGA
Protein Sequence
MEKFNKAQAKNLAAAQKLVDTYASSSEDEGELDEKHILDLLYKHYKPSETVGSSKDAAARTSTFLENTLHSGAATCLICIGSIRRVEAIWSCGSCYCFFHLNCIQRWANDSMMQMKVKAAEQQNNSQGHYNHLGEFVPPKRQKSLYWCCPQCRRDYQPAEKPTQYNCFCGKEANPPSQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQAPVSCLCGKSSPRSMRCIDKQWRCQQACKDLLACGKHKCNQVCHRPGQCPPCTSKSLQPCECQRESKMVNCSDRKWKCQNVCGAPFACGLHICEKVCHAGSCGDGECPLQVRSCPCGKNTQVRPCNEAEETCGDTCQKLLSCGQHTCTQRCHRGPCISCPVRTKKKCRCGLHEKELPCSKEFTCETKCKQIRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTKRSVPCGREKSARIVCLELCRISAKCHHAIKHRCHKSECPPCGQVCGLPNDNSKCGHICKARCHEAVRVNKPADGRPQAKKYEYKALPHPRCEEGVVVTCIGGHEVATWPCWNSKPSSCQRKCARQLKCGHHKCSLVCHSVPNPEDMQQQAGCASCEEGCAVPRPAGCVHACPKGCHPPPCTPCNFVIKGKCHCGLNQSVYKCSEYYDETGTVQEIVERREKLRSCGNRCLKNYNCGHRCTAICHSGKCPNPELCRKKVRIYCACKRLKQEIACDKHRAGQTSLECDFNCTAERSRAQAAEQQHLEQKRRHEEERNRLELEKFEAKFGKRKHKERKTVDVGPAKTKIDWQRYAIYAVSLLTVVGAIAVAFYAES