Dosh008946.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila oshimai
Gene Symbol
nfxl1
Assembly
GCA_018150695.1
Location
JAECWM010000071.1:786532-789615[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 1.7e+04 -8.1 6.4 15 19 150 154 149 154 0.82
2 19 0.13 1.1e+03 -0.3 0.4 4 10 185 191 184 191 0.95
3 19 6.4e-08 0.00056 19.8 15.5 1 18 199 215 199 216 0.98
4 19 0.67 5.9e+03 -2.6 1.5 5 10 241 246 241 246 0.91
5 19 1.1e-08 9.9e-05 22.2 16.5 1 19 252 271 252 271 0.97
6 19 0.27 2.4e+03 -1.4 1.3 5 10 295 300 295 300 0.94
7 19 4.6e-08 0.0004 20.3 10.6 1 19 306 326 306 333 0.94
8 19 0.87 7.6e+03 -3.0 0.5 1 7 350 355 349 357 0.49
9 19 6.3e-08 0.00055 19.9 12.4 1 19 360 378 360 378 0.99
10 19 0.3 2.6e+03 -1.5 0.4 1 5 387 391 387 396 0.75
11 19 2 1.7e+04 -4.9 2.3 5 10 401 406 401 406 0.91
12 19 0.00035 3.1 7.9 17.2 1 18 412 429 412 430 0.97
13 19 3.3e-08 0.00029 20.8 14.7 1 19 439 457 433 457 0.90
14 19 0.00015 1.3 9.0 8.6 9 18 502 511 500 512 0.91
15 19 0.013 1.2e+02 2.8 6.6 1 12 524 534 524 534 0.96
16 19 0.84 7.4e+03 -2.9 1.4 6 10 588 592 587 592 0.88
17 19 3.7e-06 0.032 14.2 5.7 1 12 598 609 598 609 0.97
18 19 0.51 4.4e+03 -2.2 17.5 4 18 639 653 637 654 0.92
19 19 6.1e-08 0.00054 19.9 6.9 1 16 705 719 705 724 0.97

Sequence Information

Coding Sequence
ATGGAAAAGTTCAACAAAGCGCAGGCAAAAAATCTTGCTGCCGCCCAAAAACTAGTGGACAACTACGCCTCCAGCTCTGAGGATGAGGGCGAACTGGACGAGCAGCATATTTTGGACCTTCTGTACAAGAATTATAAGCCGGCGGAGAGCTCTGGAAGCTCCAAGGATGCAGCTCGCACCAGTACGTTCCTGGAGAACACGCTCCACTCCGGAGCAGCCACTTGCCTCATTTGCATCGGGAGCATCAAGCGGGTGGAGGCGATCTGGTCCTGTGAGAGCTGTTACTGTTTCTTCCACTTGAACTGCATCCAGCGGTGGGCCAACGACAGCATGATGCAGATGAAGGTTAAGGCTGCGGAGCAGCAGAACGGCCAGACCAGCCAAGGCCACTACAATCATCTGGGAGAGTTTGTGCCGCCCAAGCGCCAGAAATCCTTGCACTGGTGCTGCCCACAGTGCCGGAGGGACTACCAGCCGGCGGAGAAGCCCACGCAGTACAACTGCTTCTGCGGCAAGGAGGCAAATCCTCAGACGCAGCCGTTTTTGGTGCCCCACTCCTGTGGAGAGATTTGCGGGAAGCTGCTGCAGCCCAAGTGTGGACACGATTGCAAGCTTTTGTGTCATCCAGGACCATGCCCACCTTGTGCCCAACAAGCACAGGTCTCCTGTTTATGCGGAAAGTCCAGTCCCAGGTCAATGAGATGCATTGACAAACAGTGGAGATGCCAGCAGGCGTGCAAAGATCTTCTAGCCTGCGGCAAACACAAATGCAATCAGGTGTGCCATCGACCAGGGCAGTGTCCACCCTGCACTAGCAAAAGCCTGCAGCCTTGCGAATGCCAGCGTGAATCCAAGATGGTTAACTGCTTCGATCGCAAATGGAAGTGTCAGAATGTTTGTGGAGCTCCCTTTTCCTGTGGCTTGCATATCTGCGAGAAAGTTTGTCATGCCGGGCCCTGCGGCGATGGGGAGTGTCCTTTGCAAGTCAGAAGTTGTCCATGTGGCAAGAATACCCAAGTAAGACCCTGTAATGAGGCTGAGGAAACTTGTGGCGATACTTGTCAGAAGCTCCTACACTGTGGTCTGCACACTTGCACACAGCGTTGTCATCGCGGTTCCTGCATTTCGTGCCCAGTGAGAACCAAAAAGAAATGTCGATGTGGCATGCATGAAAAGGAGCTGCCCTGCTCCAAGGAGTTTACATGCGAGACTAAATGCAAGCAGATACGCGACTGTGGCAAGCATGCGTGCAATAGAAAGTGCTGCGGAGATCAGTGTCCACCGTGCGAGAAGATTTGTGGCAAGCAGCTGAGCTGCAACAAGCATAAGTGCCAGTCTGTTTGCCACAACGGACCCTGCTATCCCTGCAAACTGGAATCCCAAATCAACTGCCGCTGTGGCAAAACCAGGAGAAGTGTTCCTTGTGGAAGAGAGAGAAGTGCACGCATCGTGTGCCTGGAACTTTGCCGCATAACTGCCAAATGTCATCACGCCATCAAACATCGTTGCCACAAGGGAGAATGTCCACCTTGCGGCCAAATGTGTGGTCTTCCTAATGACAACAGCAAATGTGGGCACATCTGTAAGGCTCGCTGCCATGAGGCAGTAAGAACTAATAAACCTAAAGAGGCTAGGCCACAAGCCAAAAAGTATGAATATAAGGCACTACCCCATCCCCGATGCGAAGAAGGAGTCATTGTCACCTGCATTGGGGGTCATGAGGTGGCAACCTGGCCGTGCTGGAACTCTAAGCCCAGCTCCTGCCAGCGAAAGTGTGCTCGGCAGCTCAAGTGCGGTAACCACAAGTGTTCATTGGTGTGTCATTCCGTGGCCCTTCCCAAGGACATGCAGCAGCAGGCTGAATGTGCCAACTGTGAAGAGGGTTGTGCTGTTCCTAGACCCACCGGATGTGTTCATGGCTGTCCCAAGGGCTGCCATCCGCCGCCTTGCGCACCCTGTAACTTTGTGATCAAGAGCAAGTGTCACTGCGCACTCAACCAGTTGGTGTATAAGTGCAGCGAGTATTTCGATGAGACAGGCACCGTCCAGGAGATAATCGAACACAGAGAGAGGCTACGCAGCTGCGGGAATCGCTGCTTAAAGAATTATCCCTGCGGTCATCGCTGCACAGCCATTTGTCACTCGGGCAAGTGTCCCAAATCCCGAGCTGAGATCGCCTGCGACAAGCATCGTGCTGGTCAAACGTCCTTAGAGTGCGACTCCAGCTGTAAAGAGGAACAATCCCGAGCTCAAGCAGCGGAACAACAGCATCTGGAACAGAAGCGTCGCAACGAGGAGGAGCGAAATCGCCTAGAACTAGAGAAGTTTGAGGCCAAGTTCGGCAAGCGTAAGCACAAGGAGCGCAAGACGGTGGACGTGGGTCCGCCCAAGACAAAAATCGACTGGCAGCGCATATCAATCTATGTAGTATCAGTTCTCACTGTTGTGGGAGCCATCGCCGTGGCATTTTACGCGGACAGTTAA
Protein Sequence
MEKFNKAQAKNLAAAQKLVDNYASSSEDEGELDEQHILDLLYKNYKPAESSGSSKDAARTSTFLENTLHSGAATCLICIGSIKRVEAIWSCESCYCFFHLNCIQRWANDSMMQMKVKAAEQQNGQTSQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPAEKPTQYNCFCGKEANPQTQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSSPRSMRCIDKQWRCQQACKDLLACGKHKCNQVCHRPGQCPPCTSKSLQPCECQRESKMVNCFDRKWKCQNVCGAPFSCGLHICEKVCHAGPCGDGECPLQVRSCPCGKNTQVRPCNEAEETCGDTCQKLLHCGLHTCTQRCHRGSCISCPVRTKKKCRCGMHEKELPCSKEFTCETKCKQIRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTRRSVPCGRERSARIVCLELCRITAKCHHAIKHRCHKGECPPCGQMCGLPNDNSKCGHICKARCHEAVRTNKPKEARPQAKKYEYKALPHPRCEEGVIVTCIGGHEVATWPCWNSKPSSCQRKCARQLKCGNHKCSLVCHSVALPKDMQQQAECANCEEGCAVPRPTGCVHGCPKGCHPPPCAPCNFVIKSKCHCALNQLVYKCSEYFDETGTVQEIIEHRERLRSCGNRCLKNYPCGHRCTAICHSGKCPKSRAEIACDKHRAGQTSLECDSSCKEEQSRAQAAEQQHLEQKRRNEEERNRLELEKFEAKFGKRKHKERKTVDVGPPKTKIDWQRISIYVVSVLTVVGAIAVAFYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00603756;
90% Identity
iTF_00594930;
80% Identity
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