Dmim001166.1
Basic Information
- Insect
- Drosophila mimetica
- Gene Symbol
- nfxl1
- Assembly
- GCA_037075245.1
- Location
- JBAMCH010000004.1:11396949-11400027[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2e+04 -8.1 6.4 15 19 151 155 150 155 0.82 2 19 0.13 1.3e+03 -0.3 0.4 4 10 186 192 185 192 0.95 3 19 6.5e-08 0.00065 19.8 15.5 1 18 200 216 200 217 0.98 4 19 0.69 6.9e+03 -2.6 1.5 5 10 242 247 242 247 0.91 5 19 1.2e-08 0.00012 22.2 16.5 1 19 253 272 253 272 0.97 6 19 0.28 2.8e+03 -1.4 1.3 5 10 296 301 296 301 0.94 7 19 6e-08 0.00059 19.9 8.6 1 19 307 327 307 334 0.94 8 19 0.89 8.9e+03 -3.0 0.5 1 7 351 356 350 358 0.49 9 19 2.8e-08 0.00028 21.0 13.4 1 19 361 379 361 379 0.99 10 19 0.7 7e+03 -2.7 0.4 1 5 388 392 388 397 0.73 11 19 2 2e+04 -5.0 2.3 5 10 402 407 402 407 0.91 12 19 0.00036 3.6 7.9 17.2 1 18 413 430 413 431 0.97 13 19 3.4e-08 0.00033 20.7 14.7 1 19 440 458 434 458 0.90 14 19 0.00016 1.6 9.0 8.6 9 18 503 512 501 513 0.91 15 19 0.014 1.4e+02 2.8 6.6 1 12 525 535 525 535 0.96 16 19 0.86 8.6e+03 -2.9 1.4 6 10 589 593 588 593 0.88 17 19 3.8e-06 0.038 14.2 5.7 1 12 599 610 599 610 0.97 18 19 0.073 7.2e+02 0.5 16.2 4 18 640 654 638 655 0.93 19 19 6.7e-07 0.0066 16.6 10.8 1 16 706 720 706 726 0.92
Sequence Information
- Coding Sequence
- ATGGAAAAGTTCAATAAAGCACAGGCAAAAAACCTTGCTGCTGCCCAGAAACTGGTGGACACCTACGCCTCCAGCTCCGAAGATGAAGGCGAACTGGATGAGAAGCATATTTTGGAACTCCTTTACAAGAACTATCGACCATCGGAGGGGGGTGTAGGGAGCTCCAAGGATGCGGCCAAGACCAGTACGTTTCTGGAGAACACGCTGCACTCGGGAGCAGCCACCTGTCTCATCTGCATCGGCAGCATCCGGCGGGTGGAGGCCATTTGGTCGTGCGAGAGCTGCTACTGCTTCTTCCACCTGAACTGCATCCAGCGGTGGGCCAACGACAGCATGATGCAGATGAAGGTGAAGGCGGCGGAGCAGCAGAACGGTCAGGCCAGTCAGGGACACTACAATCACCTGGGCGAGTTTGTGCCGCCAAAGCGCCAGAAATCACTGCACTGGTGCTGCCCCCAGTGTCGCAGGGATTACCAGCCAGCGGAGAAGCCCACGCAGTACAACTGCTTCTGCGGCAAAGAGGAGAATCCCGAGAATCAGCCCTTCCTGGTGCCCCATTCCTGTGGAGAGATCTGTGGAAAGCTGCTGCAGCCGAAATGTGGACACGATTGCAAGCTGCTCTGCCATCCGGGGCCATGTCCTCCGTGCGCCCAGCAGGCGCAGGTCTCCTGTTTGTGCGGCAAATCCAGCCCAAGGTCCATGCGATGCATCGACAAACAGTGGAGGTGCCAGCAGGCGTGCAAGGATCTCCTGGCCTGTGGCAAGCACAAGTGCAATCAGGTTTGCCATCGACCAGGACAGTGTCCTCCCTGCACCAGCAAAAGCCTGCAGCCCTGCGAGTGCCAGCGGGAATCCAAGATGGTCAACTGCTCCGATCGCAAATGGAAGTGTCAGAATGTATGTGGAGCTCCCTTTGCTTGTGGTTTGCATATTTGCGAAAAGGTCTGCCATGCAGGTGCCTGTGGCGATGGCGAGTGTCCTCTGCAAGTCCGGAGTTGTCCATGTGGCAAGAATACCCAAGTGAGACCCTGTAATGAGGCAGAGGAAACGTGTGGCGATACTTGCCAGAAGCTGTTGTCTTGTGGCCAGCACACTTGCACTCAGCGTTGTCATCGTGGAGCCTGTATTTCCTGCCCAATAAGAACCAAGAAGAAATGTCGTTGTGGACTGCATGAAAAGGAGCTTCCCTGCTCCAAAGAGTTCACATGCGAGACCAAATGCAAGCAGATACGTGATTGTGGCAAGCATGCTTGCAATAGAAAGTGCTGTGGCGATCAGTGTCCGCCCTGCGAGAAGATTTGTGGCAAGCAGCTGAGCTGCAACAAGCATAAATGCCAGTCCGTGTGCCACAACGGACCCTGCTATCCCTGCAAACTGGAATCCCAAATCAACTGCCGCTGTGGCAAGACCAAAAGAAGTGTTCCTTGTGGCAGAGAGCGGAGTGCACGCATTGTGTGCTTGGAATTGTGTCGCATAACTGCCAAATGCCATCATGCTATCAAACATCGCTGCCACAAGGGTGAGTGTCCTCCTTGTGGCCAAGTGTGTGGGCTTCCTAATGACGCTAGCAAGTGCGGGCACATCTGTAAAGCTCGCTGTCATGAGGCAGTTAGAGTTAATAAACCCAAAGAGGCTAGGCCGCAGGCCAAAAAGTATGAGTATAAGGCACAACCCCATCCCCGTTGCGAAGAAGGCGTCGTTGTCACCTGCATTGGGGGTCATGAAGTGGCCACCTGGCCGTGCTGGAACTCCAAACCCAGCTCCTGCCAGCGAAAGTGTGCTCGTCAGCTCAAGTGCGGCAATCACAAATGCTCATTGGTCTGCCATTCGGTGGCTCTTCCACAGGACATGACCCAGCAAGCTGGATGTGCCAACTGTGAGGAGGGTTGCTCCGTTCCCCGACCCACCGGATGTGTTCACGCCTGTCCCAAGGGCTGCCATCCGCCGCCCTGTGCGCCCTGCAATTTTGTGATCAAGAGCAAATGCCACTGTGCACTCAATCAGTTGGTGTACAAGTGCAGCGAGTATTTCGATGAGACGGGCACCGTTCAGGAGATTATCGATCGGAGGGAGAAGCTACGCAGCTGCGGTAATCGCTGCCTAAAGAATTATCCCTGCGGACATCGCTGCACAGCTATTTGCCACTCGGGCAAGTGTCCAAATCCCGAGTTGTGCCGCAAAAAGGTGCGCATCTTCTGTGCCTGCAAGCGACTCAAGCAGGAGATTGCCTGCGACAAGCACCGCGCTGGTCAAACATCCTTGGACTGCGACTCCAACTGCAAGGCGGAGCAATCCCGTGCCCAGGcggcggagcagcagcagttggagCAGAAGCGCCGCAACGAGGAGGAACGAAACCGCCTGGAACTCGAGAAGTTCGAGGCCAAGTTCGGCAAACGCAAGCACAAGGAGCGAAAGACCGTGGATGTGGGACCGGCCAAAACCAAGATCGACTGGCAGCGTTGGGCCATCTACGTGGTATCAATCCTCACCGTTGTGGGTGCGATTGCGGTGGCTTTCTACGCGGACAGTTAA
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVDTYASSSEDEGELDEKHILELLYKNYRPSEGGVGSSKDAAKTSTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHLNCIQRWANDSMMQMKVKAAEQQNGQASQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPAEKPTQYNCFCGKEENPENQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSSPRSMRCIDKQWRCQQACKDLLACGKHKCNQVCHRPGQCPPCTSKSLQPCECQRESKMVNCSDRKWKCQNVCGAPFACGLHICEKVCHAGACGDGECPLQVRSCPCGKNTQVRPCNEAEETCGDTCQKLLSCGQHTCTQRCHRGACISCPIRTKKKCRCGLHEKELPCSKEFTCETKCKQIRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTKRSVPCGRERSARIVCLELCRITAKCHHAIKHRCHKGECPPCGQVCGLPNDASKCGHICKARCHEAVRVNKPKEARPQAKKYEYKAQPHPRCEEGVVVTCIGGHEVATWPCWNSKPSSCQRKCARQLKCGNHKCSLVCHSVALPQDMTQQAGCANCEEGCSVPRPTGCVHACPKGCHPPPCAPCNFVIKSKCHCALNQLVYKCSEYFDETGTVQEIIDRREKLRSCGNRCLKNYPCGHRCTAICHSGKCPNPELCRKKVRIFCACKRLKQEIACDKHRAGQTSLDCDSNCKAEQSRAQAAEQQQLEQKRRNEEERNRLELEKFEAKFGKRKHKERKTVDVGPAKTKIDWQRWAIYVVSILTVVGAIAVAFYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603756;
- 90% Identity
- iTF_00605999;
- 80% Identity
- -