Dfic009599.1
Basic Information
- Insect
- Drosophila ficusphila
- Gene Symbol
- nfxl1
- Assembly
- GCA_018152265.1
- Location
- JAECXK010000283.1:6760539-6763603[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 1.6e+04 -8.0 6.4 15 19 149 153 148 153 0.82 2 19 0.12 9.9e+02 -0.2 0.4 4 10 184 190 183 190 0.95 3 19 6.2e-08 0.0005 19.9 15.5 1 18 198 214 198 215 0.98 4 19 0.2 1.6e+03 -0.9 1.7 5 10 240 245 240 245 0.91 5 19 1.1e-08 8.9e-05 22.3 16.5 1 19 251 270 251 270 0.97 6 19 0.27 2.1e+03 -1.3 1.3 5 10 294 299 294 299 0.94 7 19 5.7e-08 0.00046 20.0 8.6 1 19 305 325 305 332 0.94 8 19 0.85 6.8e+03 -2.9 0.5 1 7 349 354 348 356 0.49 9 19 2e-08 0.00016 21.4 15.3 1 19 359 377 359 377 0.99 10 19 0.67 5.4e+03 -2.6 0.4 1 5 386 390 386 395 0.73 11 19 2 1.6e+04 -4.9 2.3 5 10 400 405 400 405 0.91 12 19 0.003 24 4.9 19.4 1 18 411 428 411 429 0.97 13 19 3.2e-08 0.00026 20.8 14.7 1 19 438 456 432 456 0.90 14 19 5.5e-05 0.44 10.5 8.1 10 18 502 510 500 511 0.91 15 19 0.034 2.7e+02 1.6 6.0 1 12 523 533 523 533 0.96 16 19 0.82 6.6e+03 -2.9 1.4 6 10 587 591 586 591 0.88 17 19 3.6e-06 0.029 14.2 5.7 1 12 597 608 597 608 0.97 18 19 0.27 2.1e+03 -1.3 14.4 4 18 638 652 636 653 0.92 19 19 2 1.6e+04 -5.4 2.1 9 13 659 663 658 663 0.72
Sequence Information
- Coding Sequence
- ATGGAAAAGTTTAATAAAGCGCAGGCAAAAAATCTTGCTGCTGCCCAGAAACTGGTGGACACCTATGCCTCCAGCTCCGAGGATGAAGGCGAATTGGATGAGCAGCATATTTTAGAATTGCTATACAAGAACTACAAGCCGACTGAGAGCGCTGGAAGCTCCAAGGATGCGGCCCGCACCAGCACTTTTCTGGAGAACACTCTTCACTCGGGCGCAGCCACTTGTCTCATTTGCATCGGAAGCATTCGGCGAGTGGAGGCCATTTGGTCCTGCGAGAGTTGCTACTGCTTCTTTCACCTGAACTGCATCCAACGTTGGGCGAATGACAGCATGATGCAAATGAAGGTGAAGGCGGAGCAGCAAAACGGGCAGTCCAACCAGGGTTATTACAATCACCTAGGCGAGTTTGTGCCGCCCAAGCGCCAAAAGTCGCTGCACTGGTGTTGTCCACAGTGCCGCAGGGACTACCAGCCGACTGAGAAGCCCACGCAGTATAATTGCTTTTGCGGCAAGGAGGTGAACCCCCAAAACCAGCCGTTCCTAGTCCCTCACTCTTGCGGAGAAATTTGCGGGAAGTTGCTGCAGCCAAAGTGTGGACACGATTGCAAGTTGCTATGTCATCCGGGGCCATGTCCTCCTTGTGCACAACAGGCACAGGTTTCCTGTTTGTGCGGCAAATCTAGTCCCAGGTCTGTGCGATGCATCGACAAACAGTGGAGGTGCCAGCAGCCGTGCAAGAACCTTTTGGCATGCGGCAAGCACAAGTGCAATCAAGTATGCCATCGACCAGGACAATGTCCGCCCTGCACAAATAAGAGCCTACAACCTTGCGATTGCCAGCGGGAATCCAAGATGGTGAACTGTTCCGATCGCAAATGGAAGTGTCAAAACGTTTGTGGTGCTCCTTTTGCTTGTGGTTTGCACATCTGCGAAAAAGTTTGCCACGCCGGAGCTTGTGGCGATGGCGAGTGTCCTTTGCAAGTCAGGAGTTGTCCATGTGGAAAGATTACTCAAGTAAGACCCTGTAACGAGCCTGAAGAAACCTGTGGCGATACTTGCCAGAAACTGTTGTCCTGTGGGCAGCACACTTGTACTCAGCGTTGTCATCGCGGTCCTTGCATTTCCTGCCCCATACGAACGAAAAAGAAATGTCGGTGTGGCTTGCACGAAAAGGAGCTTCCGTGCTCCAAGGAGTTCACATGCGAAACTAAATGCAAGCAGATACGGGATTGTGGCAAACATCCCTGCAATAAAAAGTGCTGTGGTGATCAGTGTCCCCCTTGCGAGAAGATTTGTGGCAAGCAGCTGAGCTGCAACAAGCACAAATGTCAGTCCGTGTGCCACAATGGACCCTGTTACCCTTGTAAGCTGGAATCGCAAATTAACTGCCGTTGTGGGAAAACTAGGAGGAGTGTTCCTTGTGGCAGGGAAAGGAGTGCTCGCATTGTGTGCCTAGAACTTTGTCGCATAACTGCCAAGTGCCACCATGCCATTAGACATCGTTGCCACAAGGGAGACTGTCCTCCTTGTAACCAAGTTTGCGGTCTTCCAAATGACACCAGCAAGTGTGGACACATCTGTAGGGCTCGTTGCCATGAGGCAGTAAGAGTTAACAAACCTAAAGAGGCTAGGCCACAGGCCAAAAAGTACGAATACAAGGCATTCCCACATCCTCGTTGTGAAGAAGGCGTTGTTGTCACCTGCATCGGAGGTCATGAGGTGGCCACCTGGCCATGCTGGAACTCAAAGCCCAGCTCCTGTCAGAGAAAGTGTGGTCGTCAGCTTAAATGCGGCAATCACAAGTGTTCCTTGGTTTGCCATTCTGTGGCGCTTCCAGAGGACATGCAGCAGCAGGCTGGATGTGCAAACTGTGAGGAGGGTTGTACTGTTCCCCGACCCTCCGGATGTGTTCATGCCTGCCCCAAGGGCTGTCATCCTCCGCCCTGTGCGGCCTGCAACTTTGTGATCAAGACCAAATGCCACTGTGGGCTCAATCAGTTGGTGTACAAATGCAGCGAATATTTTGATGAATCGGGCGCCATCGAGGAGATTATCGAGCGAAGGGAAAAACTACGCAGCTGCGGGAATCGCTGCTTAAAGAATAGACTGAAGCAGGAGATAGCATGCGACAAGCATCGAGCTGGTCAGACATCCTTGGAGTGCGATTCCCATTGTAAGGCGGAGCAATCCCGTGCCAAGGCGGCCGAGCAACAGCATCTTGAGCAAAAGCGTCGCAACGAGGAAGAGCGAAATCGCTTGGAACTCGAGAAATTCGAGGCGAAGTTTGGCAAACGCAAACACAAAGAGCGTAAAACGATAGATGTCGGTCCAGCCAAGACCAAAATCAACTGGCAGCGTATAGCCATTTATGTTGTATCTATCCTCACAGTTGTCGGTGCCATTGCGGTGGCCTTTTACGCGGACAGTTAA
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVDTYASSSEDEGELDEQHILELLYKNYKPTESAGSSKDAARTSTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHLNCIQRWANDSMMQMKVKAEQQNGQSNQGYYNHLGEFVPPKRQKSLHWCCPQCRRDYQPTEKPTQYNCFCGKEVNPQNQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSSPRSVRCIDKQWRCQQPCKNLLACGKHKCNQVCHRPGQCPPCTNKSLQPCDCQRESKMVNCSDRKWKCQNVCGAPFACGLHICEKVCHAGACGDGECPLQVRSCPCGKITQVRPCNEPEETCGDTCQKLLSCGQHTCTQRCHRGPCISCPIRTKKKCRCGLHEKELPCSKEFTCETKCKQIRDCGKHPCNKKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTRRSVPCGRERSARIVCLELCRITAKCHHAIRHRCHKGDCPPCNQVCGLPNDTSKCGHICRARCHEAVRVNKPKEARPQAKKYEYKAFPHPRCEEGVVVTCIGGHEVATWPCWNSKPSSCQRKCGRQLKCGNHKCSLVCHSVALPEDMQQQAGCANCEEGCTVPRPSGCVHACPKGCHPPPCAACNFVIKTKCHCGLNQLVYKCSEYFDESGAIEEIIERREKLRSCGNRCLKNRLKQEIACDKHRAGQTSLECDSHCKAEQSRAKAAEQQHLEQKRRNEEERNRLELEKFEAKFGKRKHKERKTIDVGPAKTKINWQRIAIYVVSILTVVGAIAVAFYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603756;
- 90% Identity
- -
- 80% Identity
- -