Dtsa008277.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila tsacasi
Gene Symbol
nfxl1
Assembly
GCA_018904565.1
Location
JAEIHY010014843.1:10693-13777[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 2.2e+04 -8.1 6.4 15 19 149 153 148 153 0.82
2 20 0.13 1.4e+03 -0.3 0.4 4 10 184 190 183 190 0.95
3 20 6.5e-08 0.00072 19.8 15.5 1 18 198 214 198 215 0.98
4 20 0.69 7.6e+03 -2.6 1.5 5 10 240 245 240 245 0.91
5 20 1.2e-08 0.00013 22.2 16.5 1 19 251 270 251 270 0.97
6 20 0.28 3.1e+03 -1.4 1.3 5 10 294 299 294 299 0.94
7 20 2e-08 0.00022 21.5 10.6 1 19 305 325 305 332 0.94
8 20 0.89 9.8e+03 -3.0 0.5 1 7 349 354 348 356 0.49
9 20 2.1e-08 0.00023 21.4 15.3 1 19 359 377 359 377 0.99
10 20 0.7 7.8e+03 -2.7 0.4 1 5 386 390 386 395 0.73
11 20 2 2.2e+04 -5.0 2.3 5 10 400 405 400 405 0.91
12 20 0.00036 4 7.9 17.2 1 18 411 428 411 429 0.97
13 20 3.3e-08 0.00037 20.7 14.7 1 19 438 456 432 456 0.90
14 20 0.021 2.3e+02 2.2 7.5 9 18 501 510 499 511 0.90
15 20 0.014 1.5e+02 2.8 6.6 1 12 523 533 523 533 0.96
16 20 0.86 9.6e+03 -2.9 1.4 6 10 587 591 586 591 0.88
17 20 3.8e-06 0.042 14.2 5.7 1 12 597 608 597 608 0.97
18 20 0.072 8e+02 0.5 16.6 3 18 637 652 636 653 0.94
19 20 2 2.2e+04 -6.8 3.1 10 13 660 663 659 663 0.68
20 20 6.7e-07 0.0074 16.6 10.8 1 16 704 718 704 724 0.92

Sequence Information

Coding Sequence
ATGGAAAAGTTTAACAAAGCGCAAGCAAGACACGTCGCAGCCGCCCAGAAACTGGTGGACACCTATGCCTCCAGCTCCGAAGATGAAGGCGAACTTGACGAGAAGCATATTCTGGATCTGCTCTACAAGCACTACAAGCCATCGGAGGCGGTGGGCAGCTCCAAGGATGCGGCGGCCCGCACCAGCACATTCTTGGAGAACACACTGCACTCGGGAGCAGCCACTTGTCTTATTTGCATTGGCAGCATCCGGCGCGTGGAGGCGATTTGGTCATGCGAGAGCTGCTACTGCTTCTTTCACCTGAACTGCATCCAGCGCTGGGCCAACGACAGCATGATGCAGATGAAGGTCAAGGCGGCGGAGCAGCAGAACAACGGTCAGGGCCACTACAATCATCTGGGCGAGTTTGTGCCGCCGAAGCGCCAGAAATCCCTCCACTGGTGCTGCCCCCAGTGCCGCCGGGACTATCAGCCGGCGGAGAAGCCGACGCAGTACAACTGCTTCTGCGGCAAGGAGGCTAATCCCCCGTCGCAGCCGTTCCTAGTGCCGCATTCGTGTGGCGAGATTTGCGGGAAGCTGCTCCAGCCGAAGTGTGGACACGACTGCAAGCTACTGTGCCATCCTGGGCCATGTCCACCTTGTGCCCAGCAGGCGCAGGTATCCTGCTTGTGCGGCAAGTCCAGTCCCCGTTCCATGCGGTGCATCGACAAGCAGTGGCGGTGCCAGCAAGCGTGCAAGGATCTGCTGGCCTGCGGCAAACACAAGTGCAATCAGGTATGCCATCGCCCAGGACAATGTCCACCGTGCACCAGCAAGAGCCTGCAACCGTGCGAGTGTCAAAGAGAGTCCAAGATGGTCAACTGCTCCGATCGCAAGTGGAAGTGTCAGAATGTATGTGGAGCTCCCTTTGCGTGCGGCATGCACATATGTGAGAAGGTTTGCCATGCCGGACCCTGCGGCGACGGCGAGTGTCCCTTGCAAGTCCGTAGTTGTCCCTGCGGCAAGAACACTCAAGTTAGGCCATGCAATGAGGCGGAGGAAACTTGCGGGGATACCTGCCAAAAGCTATTGTCCTGCGGTCAGCACACTTGCACCCAGCGTTGTCATCGCGGTCCCTGCATTTCCTGCCCAGTGCGAACCAAAAAGAAGTGCCGTTGCGGGCTTCATGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCACCTGCGAAACCAAATGCAAACAGATTCGAGACTGTGGAAAGCACGCCTGTAACCGAAAGTGCTGCGGGGATCAGTGCCCACCCTGCGAGAAGATCTGCGGCAAGCAACTGAGCTGCAACAAGCACAAATGCCAGTCCGTCTGCCACAATGGACCCTGTTACCCCTGCAAGCTGGAGTCACAAATCAATTGTCGCTGTGGCAAAACCAAACGCAGTGTCCCCTGCGGGAGGGAGAAGAGTGCACGTATCGTGTGCCTGGAGCTCTGTCGAATATCTCCCAAATGCCACCACGCCATAAAGCATCGCTGCCACAAGTCCGAGTGTCCGCCTTGTGGCCAGGTCTGCGGTCTGCCCAACGACAACAGCAAGTGCGGACACATATGCAAGGCTCGATGCCATGAAGCTGTTCGTGTTAATAGGCCTGCAGATGGCAAACCACAGGCCAAGAAGTACGAGTACAAGGCCCTTCCCCATCCTCGGTGCGAAGAAGGCGTGGTTGTCACCTGCATCGGGGGACATGAGGTCGCAACCTGGCCCTGTTGGAACTCGAAGCCCAGCTCCTGTCAACGCAAGTGTGCTCGCCAGCTGAAGTGTGGCAATCACAAATGCTCGCTGGTCTGCCATTCGGTGTCCAATCCCGGGGATATGCAACAGCAGGCTGGCTGTGCTAGCTGCGAGGAAGGTTGCGCCGTTCCCCGGCCCGCCGGATGCATTCATGCCTGCCCCAAGGGCTGCCACCCGCCGCCGTGTACGCCTTGTAATTTTGTGATAAAGGGCAAGTGCCACTGCGGACTCAATCAGTCGGTCTACAAGTGCAGCGAGTATTACGATGAGACGGGAACGGTCCAAGAAATCGTTGAGCGACGGGAAAAGTTACGCAGTTGCGGAAACCGATGCTTGAAGAATTACAATTGCGGACATCGCTGCACTGCCATTTGCCACTCTGGCAAGTGCCCCAATCCTGAGCTCTGCCGGAAGAAGGTTCGCATTTACTGCGCCTGCAAGCGACTAAAACAGGAAATCGCTTGCGACAAGCAACGTGCCGGGCAGACATCCTTGGAATGCGACTCCAATTGCACGGCCGAGCGATCCCGAGCACAAGCGGCCGAGCAACAGCATTTGGAGCAGAAGCGACGGGACGAAGAAGAACGCAACCGCCTGGAACTGGAGAAGTTCGAGGCAAAGTTCGGAAAGCGCAAGCATAAGGAACGCAAGACGGTGGACACGGGCCCAGCCAAGACAAAGATCGATTGGCAGCGATACGCAATCTACGCGGTATCGCTGCTCACTGTCGTCGGAGCCATCGCTGTCGCATTCTACGCGGAAAGTTGA
Protein Sequence
MEKFNKAQARHVAAAQKLVDTYASSSEDEGELDEKHILDLLYKHYKPSEAVGSSKDAAARTSTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHLNCIQRWANDSMMQMKVKAAEQQNNGQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPAEKPTQYNCFCGKEANPPSQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSSPRSMRCIDKQWRCQQACKDLLACGKHKCNQVCHRPGQCPPCTSKSLQPCECQRESKMVNCSDRKWKCQNVCGAPFACGMHICEKVCHAGPCGDGECPLQVRSCPCGKNTQVRPCNEAEETCGDTCQKLLSCGQHTCTQRCHRGPCISCPVRTKKKCRCGLHEKELPCSKEFTCETKCKQIRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTKRSVPCGREKSARIVCLELCRISPKCHHAIKHRCHKSECPPCGQVCGLPNDNSKCGHICKARCHEAVRVNRPADGKPQAKKYEYKALPHPRCEEGVVVTCIGGHEVATWPCWNSKPSSCQRKCARQLKCGNHKCSLVCHSVSNPGDMQQQAGCASCEEGCAVPRPAGCIHACPKGCHPPPCTPCNFVIKGKCHCGLNQSVYKCSEYYDETGTVQEIVERREKLRSCGNRCLKNYNCGHRCTAICHSGKCPNPELCRKKVRIYCACKRLKQEIACDKQRAGQTSLECDSNCTAERSRAQAAEQQHLEQKRRDEEERNRLELEKFEAKFGKRKHKERKTVDTGPAKTKIDWQRYAIYAVSLLTVVGAIAVAFYAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00603756;
90% Identity
iTF_00594930;
80% Identity
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