Datr002267.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila atripex
Gene Symbol
nfxl1
Assembly
GCA_035045925.1
Location
JAWNOP010000012.1:7408010-7411178[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 1.8e+04 -8.1 6.4 15 19 145 149 144 149 0.82
2 20 0.13 1.2e+03 -0.3 0.4 4 10 180 186 179 186 0.95
3 20 6.5e-08 0.00059 19.8 15.5 1 18 194 210 194 211 0.98
4 20 0.21 1.9e+03 -1.0 1.7 5 10 236 241 236 241 0.91
5 20 2.3e-07 0.002 18.1 17.5 1 18 247 265 247 266 0.97
6 20 0.28 2.5e+03 -1.4 1.3 5 10 290 295 290 295 0.94
7 20 1.1e-07 0.00096 19.1 10.4 1 19 301 321 301 328 0.93
8 20 0.88 8e+03 -3.0 0.5 1 7 345 350 344 352 0.49
9 20 2.1e-08 0.00019 21.4 15.3 1 19 355 373 355 373 0.99
10 20 0.7 6.3e+03 -2.6 0.4 1 5 382 386 382 391 0.73
11 20 0.00036 3.2 7.9 17.2 1 18 407 424 407 425 0.97
12 20 3.3e-08 0.0003 20.7 14.7 1 19 434 452 428 452 0.90
13 20 0.00015 1.4 9.0 8.6 9 18 497 506 495 507 0.91
14 20 0.015 1.4e+02 2.7 7.1 1 12 519 529 519 529 0.96
15 20 0.86 7.8e+03 -2.9 1.4 6 10 583 587 582 587 0.88
16 20 3.8e-06 0.034 14.2 5.7 1 12 593 604 593 604 0.97
17 20 2 1.8e+04 -4.4 1.5 15 18 617 620 617 621 0.85
18 20 0.011 1e+02 3.0 15.8 3 18 633 648 632 649 0.91
19 20 1.6 1.5e+04 -3.8 1.4 8 13 654 659 653 659 0.73
20 20 7.2e-05 0.65 10.1 12.5 3 16 701 714 690 720 0.88

Sequence Information

Coding Sequence
atggaaaagtttaACAAAGCACAGGCTAAAAACTTAGCAGCAGCCCAAAAACTAGTTGAAACCTATGCTTCCAGCTCCGAAGATGAAGGCGAATTGGACGAGAAGCAAATTTTGGATCTACTTTACAAGCACTACCAACCGTCGGACGGAAGCTCGAAAGATGCCGCTCGCACGGCCACGTTCCTTGAAAACACGCTTCACTCCGGCGCAGCCACCTGCCTCATTTGCATCGGCAGCATCCGCCGGGTGGAGGCGATTTGGTCATGCGAGAGCTGCTACTGCTTCTTCCATCTTAACTGCATCCAACGCTGGGCCAATGACAGCATGATGCAGATGAAGGTAAAGGCCGCGGAGCAGCAAAATGGCCAGGGGCACTACAATCACCTGGGCGAGTTTGTTCCCCCAAAGCGCCAGAAGTCACTGCACTGGTGCTGCCCACAGTGTAGACGGGATTACCTACCGGCGGACAAGCCCACGCAGTACAACTGCTTCTGCGGCAAGGAAGCGAACCCCCAGGCTCAGCCCTTCTTGGTGCCCCACTCCTGCGGCGAGATATGCGGAAAACTGTTGCAACCAAAGTGTGGACATGACTGCAAGTTGCTGTGTCATCCGGGTCCATGTCCGCCATGTGCACAGCAAGCACAGGTCTCATGCCTGTGTGGCAAGTCCACTCCACGATCGATGAGATGTATTGATAAGCAGTGGAGATGCCAACAGCCGTGCAAGGAACTCCTGGCGTGTGGCAAGCACAAGTGTAAACAGGAATGCCATCGGCCGGGACAGTGTCCGCCATGCAATAGCAAAAGCCTTCAGCCATGTGAGTGCCAGCGAGAATCCAAGATGGTGAACTGCTCCGATCGCAAATGGAAGTGCCAGAATGTGTGCGGAACTCCCTTTGCGTGTGGCTTGCACATTTGTGAGAAAGTTTGTCACGCTGGTCCCTGCAGTGGTGGGGAGTGCCCGTTCCAAGTCAGAAGTTGTCCATGTGGAAAGAATACTCAAGTAGGACCATGTAGCGAGGCAGAAGAAACTTGCGGAGACACCTGCCAGAAGCTCCTATCCTGTGGTCAGCACACTTGCACCCAACGATGTCATCGGGGGCCCTGCATTTCCTGTCCTGTGAGAACCAAAAAGAAATGTCGCTGTGGTTTGCATGAAAAGGAGCTGCCCTGCTCCAAGGAGTTCACGTGCGACACAAAATGCAAGCAAATGCGGGACTGTGGAAAGCATGCTTGCAACCGAAAGTGCTGCGGCGACCAGTGTCCACCATGTGAGAAGATTTGTGGCAAGCAACTGAGCTGCAACAAGCACAAATGCCAGTCCGTTTGCCACAACGGACCGTGCTATCCCTGCAAACTAGAATCCCAGATTAATTGTCGATGTGGGAAAACCAAACGGAGTGTTCCTTGCGGAAGAGAACGCAGTGCACGAATTGTGTGCCTAGAGCTCTGTCGTATTTCTGCCAAATGTCATCACGCCATCAAGCACCGCTGTCACAAGGGCGAGTGTCCACCGTGCGGGCAAGTATGCGGCCTTCCTAATGACACCAGTGGATGCGGACACATTTGTAAATCCCGATGCCATGAGGCAATTCGCGTCAACAAGCCCTCAGAAACGAGACCCCAAGCCAAAAAGTACGAGTATAAATCGCTGCCCCATCCGCGCTGCGAAGAAGGCGTTGTTGTGACCTGCATTGGCGGTCATGAGGTGGCCACCTGGCCCTGCTGGAACTCCAAACCAAGTTCTTGTCAACGGAAGTGTGCACGGCAACTCAAGTGCGGAAATCACAAGTGCTCCTTGGTCTGTCATTCCGTGGCCAATCCGAAAGatatgcaacagcaactgggCTGTGCTCCATGCGAAGAGGGATGCGCAGTTCCCCGACCGGCAGGATGCACTCACTCTTGTTCCAAGGGCTGCCATCCGCCACCGTGCATGCCCTGCAACTTTgttctgaaaaataaatgccacTGCGGACTCAGTCAGTTGGTTTACAAGTGCAGCGAGTACTATGATGAAAATGGCACTGTTCAGGAGATTATCGATCGGAGGGAGAAGTTACGCAGCTGTGGCAATCGCTGTTTAAAGAATTACCCCTGCACTCATCGCTGTGCGGCAATTTGTCATTCGGGAAAGTGTCCCAACCCTGAGCTATGCCGGAAGAaagtaaaaattttttgtaaatgcaAGAGGCTCAAGCAGGAGATCGCTTGCGACAAACACCGAGCTGGGCAAACAGCACTGGCGTGCGACTCGTACTGTAAAGCAGAAATATCTCGCGCCCAGGCGGCGGAGCAACAAGATCTGGAAGAAAAGAAACGCCGCGAAGAAGAGCGAAATCGTTTAGAGTTGGAGAAGTTTGAGGCCAAGTTCGGCAAGCGGAAGCACAAGGAACGAAAAACTGTGGATATGGGACCGCCCAAGTCAGAAATAAACTGGCAGAAGATTTCAATCTATGGGGTGTCGCTTCTAACAGTTCTGGGCGCCATAGCAGTGGCCTTTTACGCCGACAgctaa
Protein Sequence
MEKFNKAQAKNLAAAQKLVETYASSSEDEGELDEKQILDLLYKHYQPSDGSSKDAARTATFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHLNCIQRWANDSMMQMKVKAAEQQNGQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYLPADKPTQYNCFCGKEANPQAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSTPRSMRCIDKQWRCQQPCKELLACGKHKCKQECHRPGQCPPCNSKSLQPCECQRESKMVNCSDRKWKCQNVCGTPFACGLHICEKVCHAGPCSGGECPFQVRSCPCGKNTQVGPCSEAEETCGDTCQKLLSCGQHTCTQRCHRGPCISCPVRTKKKCRCGLHEKELPCSKEFTCDTKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTKRSVPCGRERSARIVCLELCRISAKCHHAIKHRCHKGECPPCGQVCGLPNDTSGCGHICKSRCHEAIRVNKPSETRPQAKKYEYKSLPHPRCEEGVVVTCIGGHEVATWPCWNSKPSSCQRKCARQLKCGNHKCSLVCHSVANPKDMQQQLGCAPCEEGCAVPRPAGCTHSCSKGCHPPPCMPCNFVLKNKCHCGLSQLVYKCSEYYDENGTVQEIIDRREKLRSCGNRCLKNYPCTHRCAAICHSGKCPNPELCRKKVKIFCKCKRLKQEIACDKHRAGQTALACDSYCKAEISRAQAAEQQDLEEKKRREEERNRLELEKFEAKFGKRKHKERKTVDMGPPKSEINWQKISIYGVSLLTVLGAIAVAFYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00603756;
90% Identity
iTF_00594930;
80% Identity
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