Dboq007532.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila bocqueti
Gene Symbol
nfxl1
Assembly
GCA_018151655.1
Location
JAECXF010000230.1:7384106-7387214[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 1.7e+04 -8.1 6.4 15 19 149 153 148 153 0.82
2 19 0.13 1.1e+03 -0.3 0.4 4 10 184 190 183 190 0.95
3 19 6.3e-08 0.00055 19.9 15.5 1 18 198 214 198 215 0.98
4 19 0.67 5.8e+03 -2.6 1.5 5 10 240 245 240 245 0.91
5 19 1.1e-08 9.8e-05 22.2 16.5 1 19 251 270 251 270 0.97
6 19 0.27 2.4e+03 -1.3 1.3 5 10 294 299 294 299 0.94
7 19 1.5e-06 0.013 15.5 11.5 1 18 305 326 305 327 0.86
8 19 0.87 7.5e+03 -3.0 0.5 1 7 351 356 350 358 0.49
9 19 2.1e-08 0.00018 21.4 15.3 1 19 361 379 361 379 0.99
10 19 0.68 5.9e+03 -2.6 0.4 1 5 388 392 388 397 0.73
11 19 2 1.7e+04 -4.9 2.3 5 10 402 407 402 407 0.91
12 19 0.00035 3 7.9 17.2 1 18 413 430 413 431 0.97
13 19 3.3e-08 0.00028 20.8 14.7 1 19 440 458 434 458 0.90
14 19 0.02 1.8e+02 2.3 7.5 9 18 503 512 501 513 0.90
15 19 0.013 1.2e+02 2.8 6.6 1 12 525 535 525 535 0.96
16 19 0.84 7.3e+03 -2.9 1.4 6 10 589 593 588 593 0.88
17 19 0.12 1.1e+03 -0.2 7.7 10 18 626 634 623 635 0.90
18 19 2 1.7e+04 -6.8 3.1 10 13 642 645 641 645 0.68
19 19 6.5e-07 0.0056 16.6 10.8 1 16 686 700 686 706 0.92

Sequence Information

Coding Sequence
ATGGAAAAGTTCAATAAAGCGCAAGCAAGAAACCTCGCAGCCGCCCAGAAACTTGTCGACACCTATGCCTCCAGCTCCGAAGATGAAGGCGAACTCGACGAGAAGCATATTCTGGATCTGCTCTACAAACACTACAAGCCATCGGAGACGGTGGGCAGCTCCAAAGATGCGGCGGCCCGCACCAGCACTTTCTTGGAGAACACACTGCACTCGGGAGCAGCCACTTGTCTCATTTGCATTGGCAGCATCCGACGCGTCGAGGCGATCTGGTCATGTGAGAGCTGCTACTGCTTCTTCCACCTGAACTGCATCCAGCGCTGGGCCAACGACAGCATGATGCAGATGAAGGTGAAGGCGGCGGAACAGCAGAACAACGGTCAGGGCCACTACAATCATCTGGGCGAGTTTGTGCCACCGAAGCGCCAGAAATCGCTTCACTGGTGCTGCCCCCAATGCCGGCGGGACTATCAGCCGGCTGAGAAGCCGACGCAGTACAACTGCTTCTGCGGCAAGGAGGCTAATCCCCCGTCGCAGCCGTTCCTAGTGCCCCATTCGTGTGGCGAGATTTGCGGGAAGCTGCTCCAGCCGAAGTGTGGACATGACTGCAAGCTACTGTGCCATCCGGGGCCATGTCCTCCTTGTGCCCAGCAGGCGCAGGTATCCTGCTTGTGCGGAAAGTCTAGTCCCCGTTCCATGCGGTGCATCGACAAGCAGTGGCGGTGCCAGCAGGCGTGCAAGGATCTGCTGGCCTGCGGTAAACACAAGTGCAATCAGGTATGCCACCGCCCAGGACAATGTCCACCGTGCACCAGCAAGAGCCTGCAACCGTGCGAGTGTCAGCGAGAGTCCAAGATGGTCAACTGCTCTGATCGCAAATGGAAGTGTCAGAATGTATGCGGAGCTCCCTTTGCGTGTGGCCTGCACATATGTGAGAAGGTTTGCCATGTCGGATCCTGCGGCGGCGACGGCGACGAGTGTCCCTTGCAAGTCCGTAGTTGTCCCTGCGGCAAGAGCACTCAAGTTAGGCCATGCAATGAGGCGGAGGAAACTTGCGGGGATACCTGTCAAAAGCTATTGTCCTGCGGTCAGCACACTTGCACCCAGCGTTGTCATCGTGGTCCCTGCATTTCCTGCCCAGTGCGAACCAAAAAGAAGTGCCGTTGCGGCCTTCACGAGAAGGAGCTGCCCTGCTCCAAGGAGTTTACCTGCGAAACCAAATGCAAACAAATGCGAGACTGTGGAAAGCACGCCTGCAACCGAAAGTGCTGCGGGGATCAGTGCCCTCCCTGCGAGAAGATCTGCGGCAAGCAACTGAGCTGCAACAAGCACAAATGTCAGTCCGTCTGCCACAATGGACCCTGTTACCCCTGCAAGCTGGAATCCCAAATCAATTGTCGCTGTGGCAAAACCAAACGCAGTGTTCCCTGTGGAAGGGAGAAGAGCGCACGCATTGTGTGCTTGGAGCTCTGTCGAATATCATCCAAATGCCACCACGCTATAAAGCATCGCTGCCACAAGTCAGAGTGTCCGCCTTGTGGGCAGATGTGTGGTTTGCCCAACGACAACAGCAAGTGCGGACACATATGCAAGGCTCGATGCCATGAAGCTGTGCGTGTTAATAAGCCTACAGATGGCAGGCCACAGGCCAGGAAGTACGAGTACAAGGCCCTTCCCCATCCCCGGTGCGAAGAAGGCGTGGTTGTCACCTGCATCGGGGGACATGAGGTCGCAACCTGGCCATGCTGGAACTCAAAGCCCAGCTCCTGTCAACGCAAGTGTGCCCGCCAGCTCAACAGGCTGGCTGTGCTAGCTGTGAGGAGGGTTGCGCCGTTCCCCGGCCCGCCGGATGCGTACATGCATGCCCCAAAGGGCGCCTGCCACCCGCCGCCGTGTACGCCTTGCAATTTTGTGATCAAAGGCAAGTGCCATTGCGGACTCAATCAGTCGGTGTACAAGTGCAGCGAGTATTACGATGAGACGGGAACGGTCCAGGAGATCGTTGAGCGGCGGGAAAAGTTACGCAGTTGCGGAAACCGATGCCTGAAGAATTACAATTGCGGGCATCGCTGCACCGCCATTTGCCACTCTGGCAAGTGTCCAAATCCTGAGCTGTGTCGGAAGAAGGTTCGCATTTACTGCGCCTGCAAGCGGCTAAAACAGGAAATCGCTTGCGACAAGCATCGTGCCGGGCAGACATCCTTGGAATGCGACTCCAATTGCACGGCCGAGCGATCCCGAGCCCAGGCGGCCGAGCAACAGCATTTGGAGCAGAAGCGGCGGCACGAAGAGGAACGCAACCGCCTAGAATTAGAGAAGTTTGAGGCAAAGTTTGGCAAGCGCAAGCACAAGGAACGCAAAACTGTGGACATGGGCCCAGCAAAGACAAAGATCGATTGGCAGCGATACGCAATCTACGCGGTGTCGCTGCTCACTGTTGTGGGAGCCATCGCTGTGGCATTCTACGCGGAAAGTTGA
Protein Sequence
MEKFNKAQARNLAAAQKLVDTYASSSEDEGELDEKHILDLLYKHYKPSETVGSSKDAAARTSTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHLNCIQRWANDSMMQMKVKAAEQQNNGQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPAEKPTQYNCFCGKEANPPSQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSSPRSMRCIDKQWRCQQACKDLLACGKHKCNQVCHRPGQCPPCTSKSLQPCECQRESKMVNCSDRKWKCQNVCGAPFACGLHICEKVCHVGSCGGDGDECPLQVRSCPCGKSTQVRPCNEAEETCGDTCQKLLSCGQHTCTQRCHRGPCISCPVRTKKKCRCGLHEKELPCSKEFTCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTKRSVPCGREKSARIVCLELCRISSKCHHAIKHRCHKSECPPCGQMCGLPNDNSKCGHICKARCHEAVRVNKPTDGRPQARKYEYKALPHPRCEEGVVVTCIGGHEVATWPCWNSKPSSCQRKCARQLNRLAVLAVRRVAPFPGPPDAYMHAPKGACHPPPCTPCNFVIKGKCHCGLNQSVYKCSEYYDETGTVQEIVERREKLRSCGNRCLKNYNCGHRCTAICHSGKCPNPELCRKKVRIYCACKRLKQEIACDKHRAGQTSLECDSNCTAERSRAQAAEQQHLEQKRRHEEERNRLELEKFEAKFGKRKHKERKTVDMGPAKTKIDWQRYAIYAVSLLTVVGAIAVAFYAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00603756;
90% Identity
iTF_00594930;
80% Identity
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