Dlow010029.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila lowei
Gene Symbol
nfxl1
Assembly
GCA_008121275.1
Location
CM017781.1:1110507-1113549[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 1.6e+04 -8.1 6.4 15 19 154 158 153 158 0.82
2 20 0.13 1e+03 -0.3 0.4 4 10 189 195 188 195 0.95
3 20 6.6e-08 0.00053 19.8 15.5 1 18 203 219 203 220 0.98
4 20 0.49 4e+03 -2.2 2.7 5 10 245 250 245 250 0.94
5 20 9.4e-09 7.6e-05 22.5 15.9 1 19 256 275 256 275 0.98
6 20 1.8 1.5e+04 -4.0 0.9 5 10 299 304 299 304 0.91
7 20 2.6e-08 0.00021 21.1 15.0 1 19 310 330 310 337 0.95
8 20 0.89 7.2e+03 -3.0 0.5 1 7 354 359 353 361 0.49
9 20 1.3e-07 0.001 18.9 14.0 1 19 364 382 364 382 0.99
10 20 0.28 2.3e+03 -1.4 5.2 3 10 403 410 391 410 0.86
11 20 0.00036 2.9 7.9 17.2 1 18 416 433 416 434 0.97
12 20 3.4e-08 0.00027 20.7 14.7 1 19 443 461 437 461 0.90
13 20 0.00016 1.3 9.0 8.6 9 18 506 515 504 516 0.91
14 20 0.014 1.1e+02 2.8 6.6 1 12 528 538 528 538 0.96
15 20 0.87 7e+03 -3.0 1.4 6 10 593 597 592 597 0.88
16 20 3.8e-06 0.031 14.2 5.7 1 12 603 614 603 614 0.97
17 20 1.6 1.3e+04 -3.8 0.8 5 10 629 634 629 634 0.87
18 20 0.44 3.5e+03 -2.0 17.6 4 18 644 658 642 659 0.94
19 20 1.7 1.4e+04 -3.9 1.6 8 13 664 669 663 669 0.74
20 20 6.4e-06 0.052 13.4 9.0 2 17 711 725 710 729 0.90

Sequence Information

Coding Sequence
atggaaatgtttAATAAAGCCCAGGCCAAAAACCTAGCTGCGGCCCAGAAACTCGTAGACGCCTACGCTTCCAGCTCTGAAGATGAGGGGGAACTGGATGAGAAACAAATTTTGGATCAATTATACAAGCACTACCAACCGACGTCCAGTAGGTCTAGTGGAAAACCGGCAAGTGACAAAGATGCCGCCCGCACCACTACCTTCCTGGAAAACACCCTCCACTCTGGAGCGGCCACTTGCCTCATCTGCATTGGCAGCATCCGACGTGTGGAGCCGATATGGTCCTGTGAGAGCTGCTATTGCTTCTTCCACCTCAATTGCATTCAGCGATGGGCCAATGACAGCATGATGCAGATGAAAGTGAAGGCGGAGCAGCAGAATGGGAACCAGAACCAGGGCCACTACAATCATTTGGGGGAGTTTGTGCCGCCCAGGCGCCAGAAATCGCTCCACTGGTGCTGTCCCCAGTGCCGAAGGGACTACCAGCCGGCGGAGAAACCAACGCAATACAACTGTTTCTGCGGCAAGGAAGATAATCCACAGTCGCAGCCGTTCCTAGTACCGCATTCGTGTGGCGAAATTTGTGAGAAGCTACTCCAGCCAAAGTGCGGTCACGATTGCAAGCTCCTTTGTCATCCGGGGCCGTGTCCGCCCTGTGCTCAGCAGGCGCAAGTCTCCTGCCTGTGTGGGAAATCCACTCCGCGCTCCATGCGCTGCATAGACAAGCAATGGAAGTGCCAGCAAACGtgcaaagaGCTCTTGGCCTGTGGGAAGCACAGGTGCAGCCAAGTATGCCATCGACCGGGACAGTGTCCGCCTtgcagcagcaagagcaacCAGCCATGCGAGTGCAAGAGAGAGTCGAAAGTCGTAAGCTGCTCCGATCGCAAGTGGAAGTGCACAAATATTTGTGGAGCGACGTTCGCCTGTGGCTTGCACACCTGTGAAAAGGTGTGTCATGCCGGACCCTGTGGTGGTGGAGAGTGTCCCTTGGAAGTGAAGACATGTCCCTGTGGCAAAAATAGCCAAATGCGGCCCTGCAACGAGGCTGTGGAAACCTGTGGCGATACTTGCCAGAAGCTCTTATCCTGCGGTCAGCATTCATGCACTCAGCGCTGTCATCGCGGCAACTGCATTTCGTGCCCAGTGAGGACAAAGAAGAAATGCCGCTGTGGCCTTCATGAGAAGGAGCTGCCCTGCTCCAAGGAGCACACCTGCGAGACCAAGTGCAAGCAAATGCGTGACTGTGGCAAGCATGCCTGTAACAGAAAGTGCTGCGGCGATCAGTGCCCGCCCTGCGAAAAGATCTGTGGCAAGCAGTTGAGCTGCAACAAGCACAAGTGCCAGTCCGTGTGCCACAACGGGCCCTGCTATCCCTGCAAACTGGAGTCCCAGATCAACTGCCGCTGCGGCAAGACGCGGCGCAGTGTTCCCTGCGGGCGAGAGAAGAGTGCGCGCATCGTCTGCTTGGAACTTTGTCGTATATCTGCCAAATGCCATCATGCCATTAAACATCGCTGCCACAAAGGTGAGTGTCCGCCCTGTGGCCAGGTATGTGCTCTTCCAAATGCTGACAGCGGCTGTGGACACATCTGCAAGGCGCGCTGTCACGAGGCCGTCAGAGTGAACCGGCCTGCCGAGGCGGCCCGCCCTCAATCCAAAAAGTATGAATACAAAGCACTGCCACATCCACGCTGCGAGGAGGGCGTCAGCGTCACCTGCATTGGAGGCCACGAGGTGGCCACTTGGCCCTGCTGGAACTCCAAGCCCACTTCTTGCCAGCGCAAATGCTCGCGGAAACTCAAATGTGGCAATCATAAATGCTCACTCGTCTGTCATTCTGTGTCCAACCCGCAAGATATGCACCAGCAGGCTGGCTGTGCCACATGCGAGGAGGGTTGCATCATTCCTCGTCCTACGGGATGCGTACACGCCTGTCCCAAAGGCTGCCATCCGCCACCGTGCACTCCATGCGGCTTTGTGATCAAGAGCAAGTGCCATTGCGGACTCACGCAGTTGGTGTACAAGTGCAGCGAGTACTTCGATGAGGCGGGCACTGTCCAGGAGATAATCGATCGGAGGGAGAGATTCCGCAGCTGCGGCAATCGCTGCTTAAAGAACTATCCCTGCGCACATCGATGCATGTCGATTTGCCACTCTGGCAAGTGCCCTAGTCCCGATCTCTGTCGCAAGAAGGTTCGCATTTTCTGTGCCTGCAAAAGACTCAAGCAGGAGATCGCTTGCGACAAGCATCGGGCTGGGCAAACGTCGCTGGAGTGCGACTCTAGCTGTGTGGCCGAACGCTCCCGTGCTCAAGCGGCGGAGCAGCAGTATCTGGAGCAGAAGCGCCGCAATGAGGAGGAACGTAATCGCCTGGAACTGGAGAAGTTCGAACAGAAATTCGGAAAACGCAAGCACAAAGAACGCAAAACCATAGATGTGGGCCCGCCCAAATCGAAAATGAATTGGGAACGAACGGCCATTTATGTGGCGTCGGTAATGATTGTTCTGGGAGCCATTGCGGTGGCATTCTATGCGGACAGTTAA
Protein Sequence
MEMFNKAQAKNLAAAQKLVDAYASSSEDEGELDEKQILDQLYKHYQPTSSRSSGKPASDKDAARTTTFLENTLHSGAATCLICIGSIRRVEPIWSCESCYCFFHLNCIQRWANDSMMQMKVKAEQQNGNQNQGHYNHLGEFVPPRRQKSLHWCCPQCRRDYQPAEKPTQYNCFCGKEDNPQSQPFLVPHSCGEICEKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSTPRSMRCIDKQWKCQQTCKELLACGKHRCSQVCHRPGQCPPCSSKSNQPCECKRESKVVSCSDRKWKCTNICGATFACGLHTCEKVCHAGPCGGGECPLEVKTCPCGKNSQMRPCNEAVETCGDTCQKLLSCGQHSCTQRCHRGNCISCPVRTKKKCRCGLHEKELPCSKEHTCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTRRSVPCGREKSARIVCLELCRISAKCHHAIKHRCHKGECPPCGQVCALPNADSGCGHICKARCHEAVRVNRPAEAARPQSKKYEYKALPHPRCEEGVSVTCIGGHEVATWPCWNSKPTSCQRKCSRKLKCGNHKCSLVCHSVSNPQDMHQQAGCATCEEGCIIPRPTGCVHACPKGCHPPPCTPCGFVIKSKCHCGLTQLVYKCSEYFDEAGTVQEIIDRRERFRSCGNRCLKNYPCAHRCMSICHSGKCPSPDLCRKKVRIFCACKRLKQEIACDKHRAGQTSLECDSSCVAERSRAQAAEQQYLEQKRRNEEERNRLELEKFEQKFGKRKHKERKTIDVGPPKSKMNWERTAIYVASVMIVLGAIAVAFYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00603756;
90% Identity
iTF_00487690;
80% Identity
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