Dgun014886.1
Basic Information
- Insect
- Drosophila gunungcola
- Gene Symbol
- nfxl1
- Assembly
- GCA_011057485.1
- Location
- WTSR01005218.1:5132869-5135941[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 1.6e+04 -8.0 6.4 15 19 150 154 149 154 0.82 2 18 0.12 1e+03 -0.2 0.4 4 10 185 191 184 191 0.95 3 18 6.1e-08 0.0005 19.9 15.5 1 18 199 215 199 216 0.98 4 18 0.68 5.6e+03 -2.6 1.8 5 10 241 246 241 246 0.93 5 18 2.1e-07 0.0017 18.2 17.4 1 19 252 271 252 271 0.97 6 18 0.26 2.2e+03 -1.3 1.3 5 10 295 300 295 300 0.94 7 18 2.8e-07 0.0023 17.8 10.8 1 19 306 326 306 334 0.94 8 18 0.84 6.9e+03 -2.9 0.5 1 7 350 355 349 357 0.49 9 18 3.3e-08 0.00027 20.7 14.0 1 18 360 377 360 378 0.98 10 18 2 1.6e+04 -6.1 9.8 10 18 377 385 376 386 0.82 11 18 3.2e-08 0.00026 20.8 14.7 1 19 395 413 389 413 0.90 12 18 0.00011 0.9 9.5 7.5 9 18 458 467 456 468 0.91 13 18 0.013 1.1e+02 2.9 6.6 1 12 480 490 480 490 0.96 14 18 0.81 6.7e+03 -2.9 1.4 6 10 544 548 543 548 0.88 15 18 3.6e-06 0.029 14.3 5.7 1 12 554 565 554 565 0.97 16 18 0.068 5.6e+02 0.6 16.2 4 18 595 609 593 610 0.93 17 18 1.6 1.3e+04 -3.8 1.6 8 13 615 620 614 620 0.74 18 18 7e-05 0.58 10.1 9.5 1 16 661 675 661 681 0.92
Sequence Information
- Coding Sequence
- atggaaaagttcaATAAAGCGCAAGCAAAAAATCTGGCTGCAGCACAGAAACTGGTGGACACCTATGCCTCCAGCTCCGAGGACGAAGGCGACCTGGATGAGCAGCATATTTTGGAACTGCTGTACAAGAACTATCGGCCAACGGAAAGCGCCGGAAGCTCCAAGGATGCGGCTCGGACCAGCACTTTCCTGGAGAACACCCTACACTCCGGAGCAGCCACTTGCCTCATCTGCATCGGGAGCATCCGAAGGGTGGAGTCCATCTGGTCGTGCGAGAGCTGCTATTGCTTCTTCCACTTGAACTGCATCCAGCGGTGGGCCAATGACAGCATGATGCAGATGAAGGTGAAGGCGGCGGAGCAGCAGAATGGCCAGGCCAGCCAGGGGCACTACAATCACCTGGGCGAGTTTGTGCCGCCCAAGCGCCAGAAATCTCTGCACTGGTGCTGTCCCCAGTGCCGCAGGGACTACCAGCCGGCGGAGAAGCCAACGCAGTACAACTGCTTCTGCGGCAAGGAGGCGAACCCCCAGAATCAGCCCTTCCTGGTGCCCCATTCCTGCGGCGAGATCTGCGGAAAGTTGCTGCAGCCCAAGTGTGGGCACGATTGCAAGCTTCTGTGTCATCCGGGCCCATGCCCGCCCTGTGCCCAGCAGGCGCAGGTCTCCTGTTTGTGCGGAAAATCCAGTCCCAGGTCTATGAGGTGCATTGACAAACAGTGGAAGTGCCAGCAAGCGTGCAAGGATCTGCTGGCCTGTGGCAAGCACAAGTGTAATCAGGAGTGTCATCGACCAGGCCAATGTCCCCCATGCACCAGCAAGAGCATGCAGCCTTGCGAGTGTCAGCGGGAATCCAAGATGGTCAACTGCTCCGATCGCAAGTGGAAATGTCAGAATGTATGTGGAGCTGCTTTTACTTGTGGTTTGCATATTTGYGAAAAGGTTTGCCATGCAGGATCATGCGGCGACGGGGAGTGTCCTTTGCAAGTCAGGAGTTGTCCATGTGGCAAGAATACTCAAGTAAGACCCTGTAGTGAGGCGGAAGAAACCTGTGGCGATACGTGCCAAAAGCTGCTGTCCTGTGGTCAGCACACTTGCACCCAACGTTGTCATCGTGGTCCCTGCATTTCCTGCTGTGGTGACCAGTGTCCACCCTGCGAGAAGATTTGTGGCAAGCAGCTGAGCTGCAACAAGCACAAGTGTCAGTCCGTGTGCCACAACGGTCCTTGCTATCCTTGCAAACTGGAATCCCAGATAAACTGTCGCTGCGGAAAAACTAGGAGAAGTGTTCCTTGTGGTAGAGAGAGAAGTGCACGCATCGTGTGCCTGGAACTCTGTCGCATTACTGCCAAATGTCATCACGCTATAAAACATCGCTGCCACAAAGGTGAGTGTCAACCTTGCGGCCAAGTGTGTGGTCTTCCCAATGACACCAGCAAGTGTGGACACATCTGCAAGGCTCGCTGCCATGAGGCAGTTCGAGTCAACAAACCCAAAGAGGCTAGGCCACAGGCCAAAAAGTATGAATATAAAGCATTACCCCATCCCCGCTGCGAGGAAGGCGTCATTGTCACCTGCATCGGAGGACATGAAGTGGCCACCTGGCCGTGCTGGAACTCCAAGCCTAGCTCCTGCCAGCGAAAGTGTGCGCGTCAGCTTAAGTGCGGCAATCACAAGTGCTCCTTGGTTTGTCATTCCGTGCAGCTGCCCAAGGACATGTCACAGCAAGCTGGATGTGCCAATTGCGAGGAGGGTTGCTCCGTTCCTCGCCCCAACGGTTGTGTTCATGCCTGTCCCAAGGGCTGTCATCCACCGCCATGTGCGCCCTGCAACTTTGTGATCAAGAGCAAGTGCCACTGTGGACTCAATCAGTTGGTTTACAAGTGCAGCGAGTATTTCGATGAGACGGGCACTGTCCAGGAGATTATTGAACGCAGGGAAAAGCTACGCAGCTGCGGAAATCGATGCTTAAAGAATTATCCCTGTGGACATCGCTGCACAGCCATTTGTCACTCGAGCAAATGTCCTAATCCCGAACTGTGCCGCAAGAAGGTTCGCATATTCTGCGTCTGTAAGCGACTCAAGCAGGAGATTGCCTGCGACAAGCATCGTGCTGGTCAGACATCCTTGGAGTGCGACTKCAACTGCAAAGCGGAGCAATCCCGTGCCCAGGCGGCTGAGCAACAGCATCTGGAGCAGAAGCGTCGCGACGAGGAGGAGCGAAACCGTTTGGAGCTCGAGAAATTCGAGGCGAAGTTCGGCAAGCGCAAGCACAAGGAGCGCAAGACCGTAGATGTGGGTCCGGCCAAGTCAAAGATCAACTGGCAGCGAACGGCCATCTATGCAGTATCAATCCTCACAGTTGTGTTCGCCATCGTGGTGGCTTTCTACGCGGACAGTTAA
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVDTYASSSEDEGDLDEQHILELLYKNYRPTESAGSSKDAARTSTFLENTLHSGAATCLICIGSIRRVESIWSCESCYCFFHLNCIQRWANDSMMQMKVKAAEQQNGQASQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPAEKPTQYNCFCGKEANPQNQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSSPRSMRCIDKQWKCQQACKDLLACGKHKCNQECHRPGQCPPCTSKSMQPCECQRESKMVNCSDRKWKCQNVCGAAFTCGLHICEKVCHAGSCGDGECPLQVRSCPCGKNTQVRPCSEAEETCGDTCQKLLSCGQHTCTQRCHRGPCISCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTRRSVPCGRERSARIVCLELCRITAKCHHAIKHRCHKGECQPCGQVCGLPNDTSKCGHICKARCHEAVRVNKPKEARPQAKKYEYKALPHPRCEEGVIVTCIGGHEVATWPCWNSKPSSCQRKCARQLKCGNHKCSLVCHSVQLPKDMSQQAGCANCEEGCSVPRPNGCVHACPKGCHPPPCAPCNFVIKSKCHCGLNQLVYKCSEYFDETGTVQEIIERREKLRSCGNRCLKNYPCGHRCTAICHSSKCPNPELCRKKVRIFCVCKRLKQEIACDKHRAGQTSLECDXNCKAEQSRAQAAEQQHLEQKRRDEEERNRLELEKFEAKFGKRKHKERKTVDVGPAKSKINWQRTAIYAVSILTVVFAIVVAFYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603756;
- 90% Identity
- -
- 80% Identity
- -