Basic Information

Insect: Drosophila obscura
Gene Symbol: nfxl1_1
Assembly: GCA_018151105.1
Location: NW:1462335-1465509[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 2 1.4e+04 -8.1 6.4 15 19 152 156 151 156 0.82

2 19 0.13 9.3e+02 -0.3 0.4 4 10 187 193 186 193 0.95

3 19 6.5e-08 0.00047 19.8 15.5 1 18 201 217 201 218 0.98

4 19 0.73 5.2e+03 -2.7 1.8 5 10 243 248 243 248 0.93

5 19 9.4e-09 6.8e-05 22.5 15.9 1 19 254 273 254 273 0.98

6 19 0.46 3.3e+03 -2.1 1.0 5 10 297 302 297 302 0.93

7 19 2.3e-08 0.00016 21.3 14.8 1 19 308 328 308 335 0.95

8 19 0.89 6.4e+03 -3.0 0.5 1 7 352 357 351 359 0.49

9 19 7e-08 0.0005 19.7 11.8 1 18 362 379 362 380 0.97

10 19 0.7 5.1e+03 -2.7 0.4 1 5 389 393 389 398 0.73

11 19 0.74 5.3e+03 -2.7 1.8 5 10 403 408 403 408 0.95

12 19 0.00036 2.6 7.9 17.2 1 18 414 431 414 432 0.97

13 19 3.4e-08 0.00024 20.7 14.7 1 19 441 459 435 459 0.90

14 19 0.00016 1.1 9.0 8.6 9 18 504 513 502 514 0.91

15 19 0.014 99 2.8 6.6 1 12 526 536 526 536 0.96

16 19 0.87 6.2e+03 -2.9 1.4 6 10 592 596 591 596 0.88

17 19 2.8e-06 0.02 14.6 4.0 1 11 602 612 602 613 0.99

18 19 0.052 3.7e+02 1.0 16.6 3 19 642 658 641 658 0.94

19 19 5.3e-06 0.038 13.7 8.4 2 16 710 723 709 729 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	2	1.4e+04	-8.1	6.4	15	19	152	156	151	156	0.82
2	19	0.13	9.3e+02	-0.3	0.4	4	10	187	193	186	193	0.95
3	19	6.5e-08	0.00047	19.8	15.5	1	18	201	217	201	218	0.98
4	19	0.73	5.2e+03	-2.7	1.8	5	10	243	248	243	248	0.93
5	19	9.4e-09	6.8e-05	22.5	15.9	1	19	254	273	254	273	0.98
6	19	0.46	3.3e+03	-2.1	1.0	5	10	297	302	297	302	0.93
7	19	2.3e-08	0.00016	21.3	14.8	1	19	308	328	308	335	0.95
8	19	0.89	6.4e+03	-3.0	0.5	1	7	352	357	351	359	0.49
9	19	7e-08	0.0005	19.7	11.8	1	18	362	379	362	380	0.97
10	19	0.7	5.1e+03	-2.7	0.4	1	5	389	393	389	398	0.73
11	19	0.74	5.3e+03	-2.7	1.8	5	10	403	408	403	408	0.95
12	19	0.00036	2.6	7.9	17.2	1	18	414	431	414	432	0.97
13	19	3.4e-08	0.00024	20.7	14.7	1	19	441	459	435	459	0.90
14	19	0.00016	1.1	9.0	8.6	9	18	504	513	502	514	0.91
15	19	0.014	99	2.8	6.6	1	12	526	536	526	536	0.96
16	19	0.87	6.2e+03	-2.9	1.4	6	10	592	596	591	596	0.88
17	19	2.8e-06	0.02	14.6	4.0	1	11	602	612	602	613	0.99
18	19	0.052	3.7e+02	1.0	16.6	3	19	642	658	641	658	0.94
19	19	5.3e-06	0.038	13.7	8.4	2	16	710	723	709	729	0.87

Sequence Information

Coding Sequence: atggaaaaatttaataaagtgCAGGCAAAAAACCTTGCTGCAGCCCAGAAACTTGTAGACGCCTACGCCTCCAGCTCTGAAGATGAGGGGGAACTGGATGAGAAGAAAATTTTGGATCAATTGTACAAGCACTATCAACCCACATTGAGTGGGTCTAGTGGAAAGCCGGAAAGTGACAAGGATGCCGCCCGCACCACTACCTTCCTGGAGAACACCCTACACTCTGGAGCGGCCACTTGTCTCATCTGCATTGGCAGCATCCGACGCGTGGAGCCGATATGGTCCTGCGAGAGCTGCTATTGCTTCTTTCACCTCAACTGCATTCAGCGTTGGGCCAATGACAGCATGATGCAGATGAAAGTGAAGGCGGAGCAGCAGAATGGCAACCAGGGCCACTACAATCATTTGGGGGAGTTTGTGCCGCCCAAGCGTCAGAAATCGCTCCACTGGTGCTGTCCCCAGTGCCGAAGGGACTACCAGCCAGCGCAGAAACCAACGCAATACAACTGTTTCTGCGGTAAGGAAGAGAATCCACAGTCGCAGCCATTTCTAGTACCGCATTCGTGTGGCGAGATTTGTGAGAAACTTCTCCAGCCCAAGTGCGGGCACGATTGTAAGCTCCTTTGCCATCCGGGCCCGTGTCCGCCCTGTGCTCAGCAGGCGCAAGTCTCCTGCCTGTGTGGTAAATCGGCTCCGCGCTCCATGCGCTGCATAGACAAGCAGTGGAAGTGTCAGCAAGCGTGTAAAGAGCTCTTGGCCTGTGGGAAACATAGGTGCAGCCAAGTATGCCATCGACCAGGACAGTGCCCGCcttgcagcagcaaaagcaaccaGCCATGCGAGTGCAACCGAGAGTCGAAGGTGGTTAGCTGCTCGGATCGCAAATGGAAGTGCCAAAATATTTGTGGAGCGACATTTGCCTGTGGCCTGCACACTTGTGAAAAGGTGTGCCATGCAGGACCCTGTGGCGGTGGAGAGTGTCCTTTGGAAGTGAGGACATGTCCCTGCGGCAAAACTAGCCAACTGCGGCCCTGCAACGAGGCTGTGGAAACCTGTGGCGACACTTGCCAGAAGCTCTTGTCCTGCGGTCAGCATTCGTGCACGCAGCGCTGTCATCGCGGCAACTGCATTTCGTGCCTGGTAAGGACAAAGAAGAAATGCCGCTGCGGTCTGCATGAAAAGGAGCTACCGTGCTCCAAGGAGTTCACTTGCGAGTCCAAATGCAAGCAAATGCGCGACTGTGGCAAGCACGCGTGCAACAGAAAGTGCTGCGGCGATCAGTGCCCGCCGTGTGAAAAGATCTGTGGCAAGCAATTGAGCTGCAACAAACACAAGTGTCAGTCCGTGTGCCACAACGGGCCCTGTTATCCCTGCAAATTGGAGTCCCAGATTAATTGCCGCTGCGGCAAGACACGACGCAGCGTGCCCTGCGGCCGAGAGAAGAGTGCGCGCATCGTCTGCTTGGAACTTTGTCGTATATCGGCCAAATGCCATCATGCCATAAAACATCGCTGCCACAAAGGTGAATGTCCGCCCTGTGGCCAGGTGTGTGGTCTTCCAAATGCTGCCAGCGGCTGTGGACACATCTGCAAGGCGCGCTGTCACGAGGCTGTCAGAGCGAACCGACCTGCCGAGGCGTCGGCCCGCCCTCAAACCAAAAAGtaTGAATACAAAGCACTGCCACATCCACGCTGCGAGGAGGGCGTCAGCGTCACTTGCATTGGAGGCCACGAGGTGGCCACTTGGCCTTGCTGGAACTCCAAGCCAACTTCCTGCCAGCGCAAATGCTCGCGGAAACTCAAATGTGGCAATCACAAATGCTCACTGGTCTGTCATTTCGTGTCCAATCCGCAggatatgcagcagcaggctggcTGTGCCGCATGCGAGGAGGGTTGCATCATACCCCGTCCTACTGGATGTATACACGCCTGCCCCAAGGGCTGCCATCCGCCGCCCTGCACTCCATGCAGCTTTGTAATCAAGAGCAAGTGCTACTGCGGTCTCACGCAGCTGGTGTACAAGTGCAGCGAATACTACGATGAGGCGGGCACTGTCCAGGAGATAATCGAGCGGAGGGAGAGATTTCGCAGCTGCGGCAGTCGCTGCTTAAAGAACTATCCCTGCGCACATAGGTGCATGTCCATATGCCACTCTGGAAAGTGTCCCAATCCGGAGTTCTGCCGCAAGAAGATTCGCATTTTCTGTGCCTGTAAGAGACTCAAGCAGGAGATCGCCTGCGACAAGCATCGGGCTGGACAAACGTCGCTGGAGTGCGACTCCAGCTGTGTGGCCGAACGCACCCGGGCCCAGGCGGCGGAGCAGCAGCTTCTGGAGGAGAAGCGCCGCAATGAGGAGGAACGCAATCGCCAGGAACTGGAGAAGTTCGAACAGAAATTCGGAAAACGCAAGCACAAAGAACGCAAAACCATAGATGTGGGCCCGcccaaaacgaaaatgaatTGGCAACGAACAGCCATTTATGTCGCGTCGGTAATGATTGTTCTGGGAGCCATAGCGGTGGCATTCTATGCCGACAGTTAa
Protein Sequence: MEKFNKVQAKNLAAAQKLVDAYASSSEDEGELDEKKILDQLYKHYQPTLSGSSGKPESDKDAARTTTFLENTLHSGAATCLICIGSIRRVEPIWSCESCYCFFHLNCIQRWANDSMMQMKVKAEQQNGNQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPAQKPTQYNCFCGKEENPQSQPFLVPHSCGEICEKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSAPRSMRCIDKQWKCQQACKELLACGKHRCSQVCHRPGQCPPCSSKSNQPCECNRESKVVSCSDRKWKCQNICGATFACGLHTCEKVCHAGPCGGGECPLEVRTCPCGKTSQLRPCNEAVETCGDTCQKLLSCGQHSCTQRCHRGNCISCLVRTKKKCRCGLHEKELPCSKEFTCESKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTRRSVPCGREKSARIVCLELCRISAKCHHAIKHRCHKGECPPCGQVCGLPNAASGCGHICKARCHEAVRANRPAEASARPQTKKYEYKALPHPRCEEGVSVTCIGGHEVATWPCWNSKPTSCQRKCSRKLKCGNHKCSLVCHFVSNPQDMQQQAGCAACEEGCIIPRPTGCIHACPKGCHPPPCTPCSFVIKSKCYCGLTQLVYKCSEYYDEAGTVQEIIERRERFRSCGSRCLKNYPCAHRCMSICHSGKCPNPEFCRKKIRIFCACKRLKQEIACDKHRAGQTSLECDSSCVAERTRAQAAEQQLLEEKRRNEEERNRQELEKFEQKFGKRKHKERKTIDVGPPKTKMNWQRTAIYVASVMIVLGAIAVAFYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00603756;
90% Identity: iTF_00487690;
80% Identity: -