Dmel015004.1
Basic Information
- Insect
- Drosophila melanogaster
- Gene Symbol
- nfxl1
- Assembly
- GCA_000001215.4
- Location
- JANZWZ010000364.1:182199-185249[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.2e+04 -8.0 6.4 15 19 147 151 146 151 0.82 2 19 2 2.2e+04 -5.8 4.2 4 10 182 188 182 188 0.56 3 19 6.3e-08 0.0007 19.9 15.5 1 18 196 212 196 213 0.98 4 19 0.35 3.9e+03 -1.7 2.8 5 10 238 243 238 243 0.96 5 19 2.7e-08 0.0003 21.0 16.8 1 19 249 268 249 268 0.97 6 19 0.27 3e+03 -1.3 1.3 5 10 292 297 292 297 0.94 7 19 4.5e-08 0.00051 20.3 10.6 1 19 303 323 303 330 0.94 8 19 0.86 9.6e+03 -2.9 0.5 1 7 347 352 346 354 0.49 9 19 2e-08 0.00023 21.4 15.3 1 19 357 375 357 375 0.99 10 19 0.68 7.6e+03 -2.6 0.4 1 5 384 388 384 393 0.73 11 19 0.00035 3.9 7.9 17.2 1 18 409 426 409 427 0.97 12 19 2.8e-07 0.0031 17.8 10.8 1 17 436 452 430 452 0.89 13 19 8.4e-05 0.94 9.9 8.5 9 18 477 486 475 487 0.91 14 19 0.013 1.5e+02 2.8 6.6 1 12 499 509 499 509 0.96 15 19 1.2 1.4e+04 -3.4 1.0 6 10 563 567 562 567 0.83 16 19 2.7e-06 0.031 14.6 4.0 1 11 573 583 573 584 0.99 17 19 0.027 3e+02 1.9 15.8 3 18 613 628 612 629 0.94 18 19 2 2.2e+04 -5.5 2.1 9 13 635 639 634 639 0.72 19 19 1.1e-06 0.012 15.9 11.0 1 16 680 694 680 700 0.92
Sequence Information
- Coding Sequence
- ATGGAAAAGTTTAATAAAGCGCAAGCTAAAAATTTGGCTGCCGCCCAAAAACTGGTGGACACCTACGCCTCCAGCTCCGAGGATGAAGGCGAACTGGATGAGAATCACATTTTGGAACTCCTATACAAGAACTACAAACCGTCGGACAACGCAGGAAGCTCAAAGGAAGCGGCACGCACCAGTACGTTTCTGGAAAACACTCTACACTCGGGAGCGGCAACCTGTCTCATTTGCATCGGAAGCATTCGGCGGGTGGAGGCCATTTGGTCTTGCGAGAGCTGTTACTGCTTCTTTCACTTGAAGTGCATCCAACGGTGGGCCAACGACAGCATGATGCAGATGAAGGTAAAGGCGGCAGAGCAGCAGAACGGCCAGGGCCACTACAATCATCTGGGCGAATTTGTGCCGCCCAAGCGACAGAAATCCCTTCACTGGTGCTGCCCCCAGTGCCGCAGGGACTACCAACCGGCCGATAAGCCCACGCAGTACAACTGCTTCTGCGGCAAGGAGGTGAACCCCGAGAACCAGCCCTTCCTTGTGCCCCACTCATGCGGAGAGCACTGCGGAAAGCTTTTGCAACCGAAGTGTGGGCACGATTGCAAGCTGCTATGTCATCCGGGGCCATGTCCTCCTTGTGCGCAGCAGGCGCAGGTCTCGTGCCTGTGTGGTAAATCTAGTCCTAGGTCCGTGAGGTGCATTGACAAGCAGTGGACGTGTCAGCAGACTTGCAAGGAACTTCTAGCCTGCGGCAAGCACAAATGTAATCAGGTGTGTCATCAGCCAGGAAAGTGTCCTCCATGCACCAGCAAAAGCTTACAACCTTGCGAGTGCCAGCGGGAGTCGAAGATGGTCAACTGCTCCGATCGGAAATGGAAGTGTCAGAATGTTTGTGGAGCTCCATTTGCTTGTGGTTTGCACATTTGCGAGAAGGTGTGTCACGCTGGACCCTGCGGAGATGGAGAGTGTCCTTTGCAAGTCAGGAGTTGCCCATGCGGCAAGAATACCCAGGTAAGACCCTGTAATGAGACAGAGGAAACCTGTGGCGATACGTGCCAAAAACTTTTGTCCTGTGGCCAGCACACTTGCACCCAGCGTTGTCATCGTGGACCTTGCATTTCCTGCCCAATAAGAACCAAAAAGAAGTGTCGTTGTGGTCTGCACGAAAAGGAGTTGCCCTGCTCCAAAGAGTTTGCATGCGAGACTAAATGCAAGCAAATGCGTGATTGCGGCAAGCATGCATGCAATAGAAAGTGCTGTGGGGACCAGTGTCCACCGTGCGAAAAGATTTGTGGCAAGCAGCTGAGCTGCAACAAGCACAAATGTCAGTCCGTGTGCCACAACGGACCTTGCTATCCGGAAAGAAGTGCACGCATTGTCTGCTTGGAACTCTGTCGCATAACTCCCAAATGTCACCATGCCATTAAGCATCGTTGTCACAAGGGTGACTGTCCTCCATGTGGCCAAGTGTGCGGTCTACCCAATGACACCAGCAAGTGTGGGCACATCTGTAAGGCACGATGCCACGAGGCAGTTAGAGTTAATAAACCCAAAGAGGCTAGGCCACAGGCCAAAAAGTATGAGTATAAGGCATTACCACATCCACGGTGCGAGGAAGGCGTCATTGTCACCTGTATCGGAGGTCATGAGGTTGCCACTTGGCCATGCTGGAACTCCAAACCCACTTCCTGTCAGCGATCGTGTGCACGTCAGCTTAAGTGCGGCAATCACAAGTGTTCATTGGTTTGCCATTTCGTACCGCTTCCCCAGGATATGTCTGCGCAAACTGGCTGTGCCAACTGCGAGGAGGGTTGCACCGTTCCCCGACCAACCGGATGTATTCACGCCTGTCCCAAAGGATGTCATCCACCGCCCTGTGCGCCCTGCAACTTTGTGATTAAGACCAAGTGTCACTGTGGACTCAACCAGTTGGTTTACAAGTGCAACGAGTATTATGATGAAACGGGATCGGTCCAGGAGATCATCGAGCGAAGAGAAAAGCTACGGAGCTGCGGTAATCGATGCTTGAAGAATTATCCTTGCGGACATCGCTGCACAGCCATCTGCCACACAGGCAAGTGCCCAAATCCCGAGTTGTGCCGCAAGAAGGTTCGCATTTTCTGCGCCTGCAAGCGACTCAAGCAGGAGATTGCCTGTGACAAACACCGTGCTGGTCAGACATTCTTGGATTGCGACTCGAACTGCAAGGCGGAGCAAATTCGCGTCCAGGCGGCAGAGCAACTGCAGCTGGAACAAAAGCGTCGCGACGAGGAAGAAAGAAACCGCCTGGAACTCGAGAAGTTCGAGGCCAAGTTCGGCAAACGCAAGCACAAGGAGCGCAAAACTGTGGGTTCTGGACCGGCCAAGACCAAGATCGATTGGCAACGTAGAGCAATCTATGCAGTATCCATTCTAACAGTTGTGGGTGCAATTGTGGTGGCTTTCTACGCGGACAGTTAA
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVDTYASSSEDEGELDENHILELLYKNYKPSDNAGSSKEAARTSTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHLKCIQRWANDSMMQMKVKAAEQQNGQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPADKPTQYNCFCGKEVNPENQPFLVPHSCGEHCGKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSSPRSVRCIDKQWTCQQTCKELLACGKHKCNQVCHQPGKCPPCTSKSLQPCECQRESKMVNCSDRKWKCQNVCGAPFACGLHICEKVCHAGPCGDGECPLQVRSCPCGKNTQVRPCNETEETCGDTCQKLLSCGQHTCTQRCHRGPCISCPIRTKKKCRCGLHEKELPCSKEFACETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPERSARIVCLELCRITPKCHHAIKHRCHKGDCPPCGQVCGLPNDTSKCGHICKARCHEAVRVNKPKEARPQAKKYEYKALPHPRCEEGVIVTCIGGHEVATWPCWNSKPTSCQRSCARQLKCGNHKCSLVCHFVPLPQDMSAQTGCANCEEGCTVPRPTGCIHACPKGCHPPPCAPCNFVIKTKCHCGLNQLVYKCNEYYDETGSVQEIIERREKLRSCGNRCLKNYPCGHRCTAICHTGKCPNPELCRKKVRIFCACKRLKQEIACDKHRAGQTFLDCDSNCKAEQIRVQAAEQLQLEQKRRDEEERNRLELEKFEAKFGKRKHKERKTVGSGPAKTKIDWQRRAIYAVSILTVVGAIVVAFYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603756;
- 90% Identity
- iTF_00594930;
- 80% Identity
- -