Dboc001084.1
Basic Information
- Insect
- Drosophila bocki
- Gene Symbol
- nfxl1
- Assembly
- GCA_008042715.1
- Location
- VNJY01008017.1:179-3760[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 1.6e+04 -8.1 6.4 15 19 151 155 150 155 0.82 2 19 4.3e-06 0.035 14.0 6.8 9 18 191 200 189 201 0.92 3 19 0.67 5.5e+03 -2.6 1.5 5 10 226 231 226 231 0.91 4 19 1.3e-08 0.00011 22.0 16.2 1 19 237 256 237 256 0.97 5 19 0.27 2.2e+03 -1.3 1.3 5 10 280 285 280 285 0.94 6 19 9.9e-05 0.81 9.6 11.4 1 17 291 313 291 316 0.75 7 19 0.87 7.1e+03 -3.0 0.5 1 7 332 337 331 339 0.49 8 19 2.7e-08 0.00022 21.0 13.4 1 19 342 360 342 360 0.99 9 19 0.69 5.6e+03 -2.6 0.4 1 5 369 373 369 378 0.73 10 19 2 1.6e+04 -4.9 2.3 5 10 383 388 383 388 0.91 11 19 0.00035 2.9 7.9 17.2 1 18 394 411 394 412 0.97 12 19 3.3e-08 0.00027 20.8 14.7 1 19 421 439 415 439 0.90 13 19 0.015 1.3e+02 2.6 8.0 9 18 484 493 482 494 0.91 14 19 0.013 1.1e+02 2.8 6.6 1 12 506 516 506 516 0.96 15 19 0.33 2.7e+03 -1.6 1.2 6 10 571 575 570 575 0.85 16 19 4.1e-05 0.34 10.9 4.7 1 12 581 592 581 592 0.96 17 19 0.026 2.1e+02 1.9 15.8 4 19 622 637 620 637 0.93 18 19 1.7 1.3e+04 -3.8 1.6 8 13 642 647 641 647 0.74 19 19 6.5e-07 0.0053 16.6 10.8 1 16 688 702 688 708 0.92
Sequence Information
- Coding Sequence
- ATGGAAAAGTTCAATAAAGCGCAAGCAAAAAACCTGGCAGCCGCCCAGAAACTAGTTGACAACTACGCCTCCAGCTCCGAGGATGAAGGCGAACTGGACGAAAAGCATATTCTGGATCTGCTCTACAAGCACTACAAACCATCGGAGACGTTGGGCAGCTCCAAGGATGCCGCTGCCCGCACAAGCACATTCCTGGAGAACACTCTGCACTCGGGAGCGGCCACTTGTCTCATTTGCATTGGCAGCATCCGGCGCGTGGAGGCGATTTGGTCATGCGAAAGCTGTTACTGCTTCTTTCACCTGAACTGCATCCAGCGCTGGGCCAACGACAGCATGATGCAGATGAAGGTCAAGGCGGCGGAGCAGCAGAACAATGGTCAGGTTCAGGGTCACTACAATCATTTGGGCGAGTTTGTGCCACCGAAGCGCCAGAAATCCCTACACTGGTGCTGCCCCCAGTGCCGTCGCGACTATCTGCCGGCGGAGAAGCCCACACAGTACAATTGCTTTTGCGGCAAGGAATTGAATCCCCCAACGCAGCCCCAAAGTGTGGACATGACTGCAAGTTTGCTATGCCATCCGGGGCCATGTCCTCCGTGTGCCCAGCAGGCGCAGGTTTCCTGCTTGTGCGGCAAGTCTAGTCCCCGTTCCATGAGGTGCATTGACAAGCAGTGGCGGTGCCAGCAGGCGTGCAAGGATCTGCTGGCCTGCGGGAAACACAAGTGTAATCAGCTATGCCATCGCCCAGGACAATGTCCACCCTGCACTAGCAAGAGCCTGCAGCCTTGCGAATGTCAGCGAGAGTCCAAGATGGTCAACTGCTCCGATCGCAAATGGAAGTGTCAGAATGTATGTGGTGCCCCCTTTGCCTGCGGCCTGCACATCTGCGAGAAGGTTTGCCATGCTGGTTCCAGCGAGTGTCCTTTGCAAGTCCGTAGCTGTCCCTGTGGGAAGAATactCAAATTAGACCCTGCAATGAGGCTGAGGAAACTTGCGGGGATACCTGTCAAAAGCTATTGTCCTGCGGCCAGCACACTTGCACTCAGCGTTGTCATCGCGGTGCCTGCATTTCGTGCCCAGTGCgaaccaaaaagaaatgccGCTGCGGCCTGCATGAAAAGGAGCTGCCTTGCTCCAAGGAGTTTACCTGCGAAACCAAATGTAAACAGTTAAGGGACTGTGGCAAGCATGCCTGTAATCGAAAGTGCTGCGGTGATCAGTGCCCGCCTTGCGAGAAAATCTGCGGCAAGCAGCTAAGCTGCAACAAGCACAAATGCCAGTCCGTCTGCCACAATGGACCCTGTTATCCCTGCAAGCTAGAGTCCCAAATCAATTGCCGCTGTGGCAAAACCAAACGCAGTGTTCCCTGTGGAAGAGAGAAGAGTGCACGCATTGTATGCCTAGAGCTTTGCCGaATTTCTGCCAAATGTCACCATGCCATAAAGCATAAATGCCACAAGTCCGAGTGCCCGCCTTGTGGCCAAATGTGCGGCCTGCCCAACGACAACAGCCAGTGTGGACACATATGTAAGGCTCGCTGCCATGAAGCTGTGCGGGTTAATAAGCCAGGAGATGGCGGCAGACCACAGGCCCAGAAGTATGAATACAAAGCTCTACCCCATCCCCGTTGCGAAGAAGGCGTGGTGGTCACCTGCATTGGTGGCCATGAGGTGGCCACCTGGCCCTGTTGGAACTCCAAGCCCAGCTCCTGTCAGCGTCCGTGTAACCGGCAGCTCAAGTGCAGCAATCACAAATGCTCGCTGGTCTGCCACTCAGTTTTAAAACCAGAAGATATGCAACAGCAGGCTGGCTGTGCCAGCTGTGAGGAAGGTTGTGCCGTTCCCCGACCCTCGGGCTGTGTTCATGCCTGTCCCAAGGGCTGCCATCCGCCGCCTTGTATGCCCTGTAGCTTTGTGATCAAAAGCAAGTGCCACTGCGGTCTAAATCAGTCGGTTTACAAGTGCAGCGAGTATTACGATGAGACGGGGACGGTTCAGGAGATTGTAGAGCGCCGGGAAAAGTTACGCAGCTGCGGAAATCGATGCTTAAAGAATTACAATTGCGGCCATCGTTGCActgccatttgccattccGGCAAGTGTCCCAATCCCGAGCTTTGCCGCAAAAAGGTTCGCATTTACTGCCCCTGCAAGCGTCTAAAGCAGGAAATTGCCTGCGACAAGCATAGAGCCGGGCAAACCTACTTGGAATGCGACTCCCATTGCACGGCTGAGCAAACCCGCGCCCAGGCGGCCGAGCAACAGCATTTGGAGCAAAAGCGTCGACACGAGGAGGAGCGCAACCGcctggagctggagaagtTTGAGGCAAAGTTTGGCAAGCGCAAGCACAAGGAACGCAAGACGGTGGATGTGGGCCCCACCAAAACCAAGATTGACTGGCAGCGTTACGCAATCTATGCCGTATCCCTGCTCACTGTCTTGGGAGCCATCGCTGTGGCCTTTTACGCGGAAAGTTAA
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVDNYASSSEDEGELDEKHILDLLYKHYKPSETLGSSKDAAARTSTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHLNCIQRWANDSMMQMKVKAAEQQNNGQVQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYLPAEKPTQYNCFCGKELNPPTQPQSVDMTASLLCHPGPCPPCAQQAQVSCLCGKSSPRSMRCIDKQWRCQQACKDLLACGKHKCNQLCHRPGQCPPCTSKSLQPCECQRESKMVNCSDRKWKCQNVCGAPFACGLHICEKVCHAGSSECPLQVRSCPCGKNTQIRPCNEAEETCGDTCQKLLSCGQHTCTQRCHRGACISCPVRTKKKCRCGLHEKELPCSKEFTCETKCKQLRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTKRSVPCGREKSARIVCLELCRISAKCHHAIKHKCHKSECPPCGQMCGLPNDNSQCGHICKARCHEAVRVNKPGDGGRPQAQKYEYKALPHPRCEEGVVVTCIGGHEVATWPCWNSKPSSCQRPCNRQLKCSNHKCSLVCHSVLKPEDMQQQAGCASCEEGCAVPRPSGCVHACPKGCHPPPCMPCSFVIKSKCHCGLNQSVYKCSEYYDETGTVQEIVERREKLRSCGNRCLKNYNCGHRCTAICHSGKCPNPELCRKKVRIYCPCKRLKQEIACDKHRAGQTYLECDSHCTAEQTRAQAAEQQHLEQKRRHEEERNRLELEKFEAKFGKRKHKERKTVDVGPTKTKIDWQRYAIYAVSLLTVLGAIAVAFYAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603756;
- 90% Identity
- iTF_00594930;
- 80% Identity
- -