Dkik011516.1
Basic Information
- Insect
- Drosophila kikkawai
- Gene Symbol
- nfxl1
- Assembly
- GCA_018152535.1
- Location
- NW:1990681-1995209[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 1.5e+04 -8.1 6.4 15 19 149 153 148 153 0.82 2 19 0.13 9.3e+02 -0.3 0.4 4 10 184 190 183 190 0.95 3 19 6.5e-08 0.00047 19.8 15.5 1 18 198 214 198 215 0.98 4 19 0.69 5e+03 -2.6 1.5 5 10 240 245 240 245 0.91 5 19 1.2e-08 8.4e-05 22.2 16.5 1 19 251 270 251 270 0.97 6 19 0.28 2e+03 -1.4 1.3 5 10 294 299 294 299 0.94 7 19 0.00022 1.6 8.5 8.9 1 17 305 330 305 333 0.72 8 19 0.89 6.4e+03 -3.0 0.5 1 7 349 354 348 356 0.49 9 19 2.8e-08 0.0002 21.0 13.4 1 19 359 377 359 377 0.99 10 19 0.7 5.1e+03 -2.7 0.4 1 5 386 390 386 395 0.73 11 19 2 1.5e+04 -5.0 2.3 5 10 400 405 400 405 0.91 12 19 0.00036 2.6 7.9 17.2 1 18 411 428 411 429 0.97 13 19 3.3e-08 0.00024 20.7 14.7 1 19 438 456 432 456 0.90 14 19 0.016 1.1e+02 2.6 8.0 9 18 501 510 499 511 0.91 15 19 0.014 1e+02 2.8 6.6 1 12 523 533 523 533 0.96 16 19 3.8e-06 0.027 14.2 5.7 1 12 597 608 597 608 0.97 17 19 0.034 2.5e+02 1.5 15.7 4 18 638 652 636 653 0.93 18 19 1.7 1.2e+04 -3.9 1.6 8 13 658 663 657 663 0.74 19 19 6.7e-07 0.0048 16.6 10.8 1 16 704 718 704 724 0.92
Sequence Information
- Coding Sequence
- ATGGAAAAGTTCAATAAAGCACAAGCAAAAAACCTGGCAGCCGCCCAGAAACTAGTTGACAACTACGCCTCCAGCTCTGAGGATGAAGGCGAACTGGACGAGAAGCATATTCTGGATCTGCTCTACAAGCACTACAAACCATCGGAGACGTTGGGCAGCTCCAAGGATGCCGCGGCCCGCACAAGCACATTCCTGGAGAACACTCTGCACTCGGGAGCGGCCACTTGTCTCATTTGCATTGGCAGCATTCGGCGCGTGGAGGCGATCTGGTCATGCGAAAGCTGCTACTGCTTCTTTCACCTGAACTGCATCCAGCGCTGGGCCAACGACAGCATGATGCAGATGAAGGTCAAGGCGGCGGAGCAGCAGAACAATGGTCAGGGTCACTATAATCATTTGGGCGAGTTTGTGCCACCAAAGCGCCAGAAATCCCTACACTGGTGCTGCCCCCAGTGCCGCAGGGACTATCAGCCGGCGGAGAAGCCCACACAGTACAATTGCTTTTGCGGCAAGGAATTGAATCCCCCATCGCAGCCGTTCCTAGTGCCACATTCCTGTGGCGAGATCTGCGGAAAACTGCTGCAGCCAAAGTGTGGGCACGACTGCAAGTTGCTTTGCCATCCGGGGCCATGTCCTCCGTGTGCCCAGCAGGCGCAGGTCTCCTGTTTGTGCGGCAAGTCTAGTCCCCGTTCAATGAGGTGCATTGACAAGCAGTGGCGGTGCCAGCAGGCGTGCAAGGATCTGCTGGCCTGCGGCAAACACAAGTGTAATCAGGTATGCCATCGCCCAGGACAATGTCCACCCTGCACCAGCAAGAGCCTGCAGCCCTGCGAATGTCGGCGAGAGTCCAAGATGGTCAACTGCTCCGATCGCAAATGGAAGTGTCAGAATGTATGTGGTGCCCCCTTTGCCTGCGGTCTGCACATCTGCGAGAAGGTTTGCCATGCTAGTTCCAACGACCACGGCGAGTGTCCCCTGCAAGTCCGTAGCTGTCCCTGCGGCAAGAATactCAAATTAGACCCTGCAATGAGGCGGAAGAAACTTGCGGGGATACCTGTCAAAAGCTATTGTCCTGCGGCCAGCACACTTGCACTCAGCGTTGTCATCGCGGTGCCTGCATTTCGTGCCCAGTGCGAACCAAAAAGAAATGCCGCTGCGGCCTGCATGAAAAGGAGTTGCCCTGCTCCAAGGAGTTTACCTGCGAAACCAAATGTAAACAATTAAGGGACTGTGGCAAGCATGCCTGTAACCGAAAGTGCTGCGGGGATCAGTGCCCGCCTTGCGAGAAGATCTGCGGCAAGCAGCTAAGCTGCAACAAGCACAAATGCCAGTCTGTCTGCCACAATGGACCCTGTTATCCCTGCAAGCTAGAGTCCCAAATCAATTGCCGCTGTGGCAAAACCAAACGCAGTGTTCCCTGTGGAAGAGAGAAGAGTGCACGCATTGTGTGTCTGGAGCTTTGCCGAATTTCTGCCAAATGTCACCATGCCATTAAGCATAAATGCCACAAGTCCGAGTGCCCGCCTTGTGGCCAGATGTGCGGCCTGCCCAACGACAACAGCAAGTGTGGACACATATGTAAGGCTCGCTGTCATGAAGCTGTGCGGGTTAATAAGCCAGGAGATGGCAGACCACAGGCCAAAAAGTATGAATACAAAGCTCAACCCCATCCCCGTTGCGAAGAAGGCGTGGTGGTCACCTGCATTGGTGGCCATGAGGTAGCCACCTGGCCCTGTTGGAACTCCAAGCCTAGCTCCTGTCAGCGTCAGTGTGCCCGGCAGCTCAAGTGCGGCAATCACAAATGCTCGCTGGTCTGCCACTCAGTGCCAAAACCAGACGATATGCAACAGCAAGCTGGCTGTGCCAGCTGTGAGGAAGGTTGTGCCGTTCCCCGACCCGCCGGCTGTGTTCATGCCTGTCCCAAGGGCTGCCATCCGCCGCCTTGTATGCCCTGTAATTTTGTGATCAAAAGCAAGTGCCATTGCGGTCTGAATCAGTCGGTGTACAAGTGCAGCGAGTATTACGATGAGACGGGCACGGTCCAGGAGATTGTGGAGCGCCGGGAAAAGTTACGCAGCTGCGGAAATCGATGCTTAAAGAATtacaATTGCGGCCATCGCTGCACTGCCATTTGCCATTCCGGCAAGTGTCCCAATCCCGAGCTTTGCCGCAAAAAGGTTCGCATTTACTGCGCCTGCAAGCGTCTTAAGCAGGAAATTGCCTGCGACAAGCACCGTGCCGGGCAAACATCCTTGGAATGCGACTCCCATTGCACGGCCGAGCAAACCCGCGCCCAGGCGGCCGAGCAACAGCATTTGGAGCAGAAGCGTCGACACGAGGAGGAGCGCAACCGCCTGGAGCTGGAGAAGTTTGAGGCAAAGTTTGGCAAGCGCAAGCACAAGGAACGCAAGACTGTGGACGTGGGCCCCACCAAGACCAAGATTGACTGGCAGCGTTACGCAATCTACGCAGTATCCTTGCTCACTGTATTAGGAGCCATTGCTGTGGCATTCTACGCAGAAAGTTAA
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVDNYASSSEDEGELDEKHILDLLYKHYKPSETLGSSKDAAARTSTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHLNCIQRWANDSMMQMKVKAAEQQNNGQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPAEKPTQYNCFCGKELNPPSQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSSPRSMRCIDKQWRCQQACKDLLACGKHKCNQVCHRPGQCPPCTSKSLQPCECRRESKMVNCSDRKWKCQNVCGAPFACGLHICEKVCHASSNDHGECPLQVRSCPCGKNTQIRPCNEAEETCGDTCQKLLSCGQHTCTQRCHRGACISCPVRTKKKCRCGLHEKELPCSKEFTCETKCKQLRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTKRSVPCGREKSARIVCLELCRISAKCHHAIKHKCHKSECPPCGQMCGLPNDNSKCGHICKARCHEAVRVNKPGDGRPQAKKYEYKAQPHPRCEEGVVVTCIGGHEVATWPCWNSKPSSCQRQCARQLKCGNHKCSLVCHSVPKPDDMQQQAGCASCEEGCAVPRPAGCVHACPKGCHPPPCMPCNFVIKSKCHCGLNQSVYKCSEYYDETGTVQEIVERREKLRSCGNRCLKNYNCGHRCTAICHSGKCPNPELCRKKVRIYCACKRLKQEIACDKHRAGQTSLECDSHCTAEQTRAQAAEQQHLEQKRRHEEERNRLELEKFEAKFGKRKHKERKTVDVGPTKTKIDWQRYAIYAVSLLTVLGAIAVAFYAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603756;
- 90% Identity
- iTF_00594930;
- 80% Identity
- -