Dcol000092.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila colorata
Gene Symbol
stc
Assembly
GCA_035041545.1
Location
JAWNLD010000013.1:19787-24776[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.4 1.2e+04 -3.6 0.5 15 18 336 339 335 340 0.79
2 15 2 1.7e+04 -4.1 1.6 15 19 363 367 362 367 0.81
3 15 0.055 4.8e+02 0.9 2.0 4 11 396 403 395 404 0.90
4 15 3.6e-06 0.031 14.2 12.7 4 19 410 425 408 425 0.91
5 15 5e-08 0.00043 20.2 12.5 1 18 461 478 461 479 0.98
6 15 1.7 1.5e+04 -3.9 1.4 8 13 484 489 483 490 0.74
7 15 2e-09 1.7e-05 24.7 12.9 1 19 519 537 519 537 0.98
8 15 2.3e-05 0.2 11.7 17.0 4 19 585 600 578 600 0.88
9 15 0.056 4.9e+02 0.8 11.6 1 11 640 650 640 662 0.79
10 15 2.7e-10 2.4e-06 27.4 15.1 1 18 667 684 667 685 0.97
11 15 2 1.7e+04 -4.3 1.2 6 10 714 718 714 718 0.88
12 15 2 1.7e+04 -6.6 9.7 10 18 732 741 722 742 0.80
13 15 2 1.7e+04 -4.5 1.5 10 13 749 752 747 753 0.80
14 15 5.9e-07 0.0051 16.7 14.3 1 15 778 792 778 794 0.98
15 15 0.00013 1.2 9.2 8.4 1 19 811 830 811 830 0.95

Sequence Information

Coding Sequence
ATGGCCGAAtattggcagcagcagcagcagcagcaacaacaacagcagcagcagcagcagttaaCCAACGGCGCTGAGTCAGCCAACggccacaataacaacaattatcattggcggcggcggcggcgcttCGGCCTGACGCCCAACAgcagcggtggcggcggcggcggtggcgcaagcagcaacagcaacaattttgctggcggcggcagcTTATGTGGGCCCGCTTTTTACGCGCATCAGAACGGGCACGGCAACAGTTATGGGCAGCTGTATACGCCCTTTGGCAACAATCCGTTTgtagctgctgccgccgctggcgctggagctggCGGCTACGATTTCAGTGCTTCCAAACTGCAGGCAACTGCGCCCGAATTTGTGCCCAACTTTGCCAAGCTCAGCCTGACAACGGAGCcggcgacgacgacaacgacaacggcaacggcgtcCGGCAAAGGtcagaacagcaacaacaacactgccACACAGCCCagcgagcagcaacagcagcagagagTTGAGCAGCGGCCGCTAAAGCCgcccggcagcggcagcaacagcaacagtcgccagcagcagcgccgcaaCGACTATCGCGAGGAACGCGGCGAGCGCAACGAGCGCAGCGAGCGTAATGAGGAGCGTTATGAGCGCGGCAAGAAGCCGCAGAAGCAACAGCGCTACGACAATCATCGCAGCAATAAGCGGCGCGACGACTGGAACCGCAATCGGGATCGCATCAATGGCTATTCGCGCGCCGCCGACGAGCTGGACacgagcaacagcaacgacagcgCCCAGCCGTCGCcagaaaagcagcagcaacaacaacaacaacaacaacatcatcaacatcatcagtTGCAACAAATATCGCCGCGACGCGCGCCCGAGCACGAGAAGCTGTCGCAGCGCGAGAAACTGATGCGCGACATCGAACAGCGGCGGCTCGAGTGTCTCGTCTGCGTGGAGCAGATCAAGGCGCATCACGGCACCTGGTCGTGCCAGAACTGTTACCATGTGCTGCACCTCAAGTGCACCATCACGTGGGCCAGCAGCTCCAAGTCGGCGGAGGGCTGGCGCTGTCCGGCCTGCCAAAATGTGCTGGAGGAGCTGCCGCGCGAATATCTGTGCTTTTGCGGCAAACTCAAGAATCCGCCATTAACGCGCACGGAACTCGCGCACAGCTGCGGCGAACTCTGCTGTCGGGTCGAGGGCTGTGCGCACGCGTGCACGCTGCTCTGCCATCCGGGCCCGTGTCCGGCGTGCCAGGCGAACGTGAGTcgcagctgcggctgcggccgCACCTCCAAGCTGATGCAGTGCGCGCTGAAACAGCCGCTCCAATGCGACGACAACTGCGACAAGCCGCTCAACTGCGGCGAGCATCGCTGCCAGCAGCGCTGCCATGCGGGCAAGTGCGAGGCGTGCGCGGAGCAGGTGCCGCAGCGCTGCCACTGCGGCAAGCAGCGGCGCGAGGTGATCTGCACGCGCGAGAGCCAGGACAAGCGCAGCTATTCGTGCAAGGAGAGCTGCGGCCAGCCGCTGCCGTGCGGCAATCACAAGTGCAAGGATTCGTGTCACGCCGGCGCCTGTCGTCCCTGCAAGCTGAGCCCCGCTCAGATCACCAGCTGTCCGTGCGGCAAGCTGGCCGTGCCGGCCACACAGCGCACCAGTTGCCTGGACCCGGTGCCCACCTGCGACGGCATTTGCGGCAAGACGTTGCGCTGCGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAATGTCATCTGGGCCAGTGTCCGCCGTGTCCCAAGCAGACGGCCGTTAAGTGCCGTTGCGGTCACATGGATCAGCTGATCAAGTGCCGGCAGCTGTCGACGCGGGCGGACGATGCGCGCTGCAAGCGCCGCTGCACGAAAAAGCGCAGCTGCGGCAAGCACAAATGCAACGCCGAGTGCTGCATCGATATCGATCACGCCTGCCCGCTGCCCTGCAATCGAACGTTGAGCTGCGGCCGGCACAAGTGCGATCAGCCCTGCCATCGCGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGTGAATGCGGCGCCGAGGTCATCTATCCGCCGGTGCCGTGCGGCACCAAGAAGCCCATCTGCAAGCGACCCTGTTCGCGCACGCACGGCTGCGAGCATGCGCCGCAGCACAACTGCCATGCGGCGGCCAGCTGCCCGCCGTGCATGATGTTCACCACCAAGTGGTGCCACGGCGGCCACGAACAGCGCAAGACGATACCCTGCTCCCAGGCCAGCTTCAGCTGTGGTCTGGCCTGCGGCAAACCGCTCGCCTGCGGCCGACACAAGTGCATTCGGCCGTGTCACGAGGGCGACTGTTGTCAGCTGGCGGGCGAATTGTGCCGGCAGAGCTGCACGAAGCCGCGGCTGCTGTGCGGACACAAGCGTGCGGCTGCGTGCCACGAGGGCGCCTGTCCGGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGGAAGCAGAGCCGCAGCTGTCAGGAGCTAGCCAGGGAGCACAGTCGCATCGCCACCGCGCAGCTGGCCTCGTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAGATACTCGCgcccaacaaaaacaacaagtcCAACAAAACCTTGGACTGCAACGATGAGTGTCGTCTGTTGGAGCGCAATCGTCGCTTGGCCATTGGCCTGCAGTCGCGCAATCCGGACGCGCAGCTCAAGCTGCTGACCAAGTACTCGGAGTTCTTGCGCGGCTTCGCCAAGCGCAATCCGGCGCTCACCAAGAGCGTCTATGAAACGCTCACCGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAGAAGTCGAGAAGTCACTCGTTTCCCACCATGAATCGCGAGAAGCGTCAGCTGGTCCACGAACTGTGCGAAGTATTTGGCGTGGAGTCCGTCTCCTACGACAAGGAGCCCAATCGCAATGTGGTCGCCACGGCGCACAAGGAACGCTGCTGGCTGCCTGCCACAAGCATTATGGAGGTGCTGGCTCGCGAATCGGGCCAACGGCGCGTGCCCGTTCCGAGCAACAATGCATGGGGGCTCAAAAAGTAG
Protein Sequence
MAEYWQQQQQQQQQQQQQQQLTNGAESANGHNNNNYHWRRRRRFGLTPNSSGGGGGGGASSNSNNFAGGGSLCGPAFYAHQNGHGNSYGQLYTPFGNNPFVAAAAAGAGAGGYDFSASKLQATAPEFVPNFAKLSLTTEPATTTTTTATASGKGQNSNNNTATQPSEQQQQQRVEQRPLKPPGSGSNSNSRQQQRRNDYREERGERNERSERNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYSRAADELDTSNSNDSAQPSPEKQQQQQQQQQHHQHHQLQQISPRRAPEHEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCAHACTLLCHPGPCPACQANVSRSCGCGRTSKLMQCALKQPLQCDDNCDKPLNCGEHRCQQRCHAGKCEACAEQVPQRCHCGKQRREVICTRESQDKRSYSCKESCGQPLPCGNHKCKDSCHAGACRPCKLSPAQITSCPCGKLAVPATQRTSCLDPVPTCDGICGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHAPQHNCHAAASCPPCMMFTTKWCHGGHEQRKTIPCSQASFSCGLACGKPLACGRHKCIRPCHEGDCCQLAGELCRQSCTKPRLLCGHKRAAACHEGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNDECRLLERNRRLAIGLQSRNPDAQLKLLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK