Dpau004587.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila paucipuncta
Gene Symbol
stc
Assembly
GCA_035043875.1
Location
JAWNMP010000267.1:4391275-4395112[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.4 1.2e+04 -3.6 0.5 15 18 356 359 355 360 0.79
2 16 2 1.7e+04 -4.1 1.6 15 19 383 387 382 387 0.81
3 16 0.015 1.3e+02 2.7 2.5 4 11 416 423 415 424 0.91
4 16 5.8e-07 0.0051 16.8 15.1 1 19 428 445 428 445 0.93
5 16 2 1.7e+04 -4.2 1.4 6 10 471 475 470 475 0.87
6 16 2.4e-08 0.00021 21.2 11.4 1 18 481 498 481 499 0.96
7 16 2 1.7e+04 -6.3 3.9 7 13 503 509 503 510 0.74
8 16 2e-09 1.7e-05 24.7 12.9 1 19 539 557 539 557 0.98
9 16 2 1.7e+04 -5.4 1.3 11 16 588 593 588 593 0.67
10 16 2.4e-05 0.21 11.6 17.0 4 19 605 620 598 620 0.88
11 16 0.065 5.7e+02 0.6 11.7 1 11 660 670 660 682 0.79
12 16 4.7e-10 4.1e-06 26.7 15.5 1 18 687 704 687 705 0.97
13 16 1.4 1.2e+04 -3.6 1.5 6 10 734 738 733 739 0.61
14 16 2 1.7e+04 -6.5 9.2 9 18 751 761 741 762 0.77
15 16 7e-08 0.00061 19.7 11.9 1 16 798 813 798 821 0.95
16 16 5.7e-08 0.0005 20.0 12.0 1 19 831 850 831 850 0.97

Sequence Information

Coding Sequence
ATGGCCGAAAATtggaaacagcagcaacaacaacagcagctacaacagcagcagcagcagccgccaacGCAGCAACATCAGCTAACAAATGGAGCAGCAGCTCATAATGACTCAGTCGCCGCTGCCTCTATCGCTGACGCTGCCTCAGTTGCTGCCTGTAATGGGCcgagtaacaacaacaacaactatgtTAACTTCAATCAGTTCATCACGCAGCATAATTTACACAGCTCCAATCTCGGCTACAgcagtggcggcggcggcgtcggcAGCGGCGGTGCCTTTGGCCTGACGCCCGCAAGCAGCAGCGGTAGCGCTGCCAACAACTCCAGCTTTGGCCAATATGCGGCGCCTACTTTCGACCACCTGATTGGCGATGACGCTGGTCAAAATTATCCCAATTTGTACTCAGCTCTTGGCAATAATCCATTTGCTGCGCGTGCTGCCGGCGGCGCCGCTTTCGATTTTAGCGCTTCCAAGCTGCAGGCGTCGGCACCCGAATTTGTGCCCAACTTCGCCAAGCTCAGCCTGACGAGcaaaaccaacagcagcagcagtaatagcaataataataataatagcaacaacagcaacactgccaCAACACAGCACACGCCACATGAGGCAGCTAGCAGCAATGCTCAACGAGGCTTGGCGAAGCCGCTGGCGGGCGGCAATAATACTCGGCAGAATCAGCGACGCCAGGACTATCGCGAAGATCGCCACGAGGATCGCTATGAGCGTGGCAAGAAGCCCCAGAAGCAGCAGCGCTATGACAATCATCGCAGCAACAAAAGACGCGACGACTGGAATCGCAATCGTGATCGCATCAATGGCTATGCGCGCGCCGCCGACGAACTggacaccagcaacagcaacgacagtGCGCAGCCCTCGCCCGAGAAGCAGCCCGAGAAGCAACTGCCACACCAAGTCTCCCCTCGCCGAGCGCCCGACAATGAGAAGCTGTCGCAGCGGGAGAAGCTGATGCGCGACATCGAGCAGCGTCGACTGGAGTGCTTAGTGTGCGTGGAGCAGATCAAGGCGCATCATGGCACCTGGTCTTGCCAGAACTGCTATCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCGAGCAGTTCCAAGTCGGCGGAGGGCTGGCGCTGTCCAGCCTGCCAGAATGTGCTGCAAGAGTTGCCGCGCGAATATCTCTGCTTCTGTGGCAAGCTGAAGAATCCGCCGCTCACACGCAACGAGCTGGCGCACACTTGCGGCGAACTCTGCTGCCGCGTCGAGGGCTGCAGTCATGCGTGCACCCTGCTCTGTCATCCGGGCCCGTGTCCGCCGTGCCAGGCGAACGTGTTGCGCAGCTGTGGCTGCGGACGCACCTCCAAGCTGATGCAGTGCGCCAtgaagcagcaactgcagtGCGAGGCCACCTGCGACAAGTCACTCAACTGCGCCGAGCATCGTTGCCAGCAGTTGTGCCATGCGGGCAAATGTGAGCCGTGTGCGGAACAGGTGGAGCAACACTGCCActgtggcaagcagcagcgCGAAGTGGTCTGCACCAAGGAGAGTCAGGATAGGCGTAGCTATTCGTGCAAGGAGTGCTGCGGCAAGCCGTTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGCCACGCCGGCGCCTGTCGTCCGTGCAAGCTGAGTCCGCAGCAGATCACCAGTTGCCCCTGTGGCAAGTTGGCAGTGCCTCCGACGCAGCGCAGCAGCTGTCTGGATCCGGTGCCGACGTGCGAGGGCGCATGTGGCAAGACGCTGCGATGTGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAATGCCATTTGGGGCAGTGTCCGCCGTGCCCCAAACAGACGGCCGTCAAATGCCGTTGCGGCCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCGACCCGTGCGGACGATGCACGCTGCAAGCGCCGTTGCACGAAGAAACGCAGCTGTGGAAAGCACAAATGCAACGCGGAATGTTGCATCGACATCGATCATGCCTGCCCGCTGCCCTGCAACCGAACGCTGAGCTGCGGCAAACACAAGTGCGATCAGCCATGCCATCGGGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGATGAGCTCTACTGTGAGTGCGGCGCCGAAGTGATCTATCCACCGGTGCCGTGTGGCACCAAACGGCCGCCCTGCAAACGGCCCTGTTCGCGCACCCACGGCTGCGAGCATGTGCCGCAGCACAGTTGCCATGCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAATCACGAGCAGCGCAAGACGATACCTTGCTCGCAGGCCAGCTTCAGCTGTGGCTTTCCCTGCGCCAAGCCGCTCGCGTGTGGCCGCCATAAATGCATCCGGTCGTGCCACGAGGGCGAGTGTCCGCAGCAGCCGGGCGAGCTGTGCCGCCAGAGCTGCACCAAGCCTCGTCTGTTGTGCGGCCACAAGTGTGCCGCTGTCTGCCACGATGGCGCCTGTCCAGATACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGTCGCAGCTGCCAGGAACTTGCCCGGGAGCACAGTCGCATTGCCACGGCCCAGCTGGCCTCCTCTATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAAATACTCGCAcccaccaaaaacaacaaatccaacAAAACTTTGGACTGCAACGAGGAGTGTCGTCTGCTGGAACGCAATCGCCGATTGGCCATTGGACTGCAGACTCGGAATCCGGAGTCGCAGCTGAAGTCGTTGACGAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGTGCTAACTAAGAGCGTCTACGAAACGCTCAGCGACCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCGCGCAGTCACTCGTTCCCCACGATGAATCGCGAGAAGCGTCAAATGGTGCACGAGCTGTGCGAAGTGTTTGGCGTGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGCAACGTGGTCGCCACCGCGCACAAGGAACGCTGCTGGTTGCCCGCCACTAGCGTCATGGAGGTCCTGGCCCGAGAGTCTGGTCAGCGTCGCGTCCCGGTGCCCAGCAACAATGCCTGGGGAATCAAGAAGTAG
Protein Sequence
MAENWKQQQQQQQLQQQQQQPPTQQHQLTNGAAAHNDSVAAASIADAASVAACNGPSNNNNNYVNFNQFITQHNLHSSNLGYSSGGGGVGSGGAFGLTPASSSGSAANNSSFGQYAAPTFDHLIGDDAGQNYPNLYSALGNNPFAARAAGGAAFDFSASKLQASAPEFVPNFAKLSLTSKTNSSSSNSNNNNNSNNSNTATTQHTPHEAASSNAQRGLAKPLAGGNNTRQNQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYARAADELDTSNSNDSAQPSPEKQPEKQLPHQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRSCGCGRTSKLMQCAMKQQLQCEATCDKSLNCAEHRCQQLCHAGKCEPCAEQVEQHCHCGKQQREVVCTKESQDRRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLAVPPTQRSSCLDPVPTCEGACGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFDELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHVPQHSCHAAATCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGFPCAKPLACGRHKCIRSCHEGECPQQPGELCRQSCTKPRLLCGHKCAAVCHDGACPDTPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKNNKSNKTLDCNEECRLLERNRRLAIGLQTRNPESQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGIKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00496269;
90% Identity
iTF_00607498;
80% Identity
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