Drob013075.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila robusta
Gene Symbol
stc
Assembly
GCA_004143805.1
Location
SCDV01003067.1:14896-20763[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.4 1.9e+04 -3.6 0.5 15 18 341 344 340 345 0.79
2 16 2 2.7e+04 -4.1 1.6 15 19 368 372 367 372 0.81
3 16 0.055 7.5e+02 0.9 2.0 4 11 401 408 400 409 0.90
4 16 3.7e-06 0.05 14.2 12.7 4 19 415 430 413 430 0.91
5 16 3.7e-08 0.0005 20.6 16.5 1 18 466 483 466 484 0.99
6 16 2 2.7e+04 -4.5 1.5 9 13 490 494 489 495 0.71
7 16 1.3e-07 0.0018 18.9 10.9 1 19 524 542 524 542 0.98
8 16 1.1 1.5e+04 -3.3 0.5 5 10 572 577 572 577 0.90
9 16 2.3e-05 0.32 11.7 17.0 4 19 590 605 583 605 0.88
10 16 0.057 7.7e+02 0.8 11.6 1 11 645 655 645 667 0.79
11 16 2.7e-10 3.7e-06 27.4 15.1 1 18 672 689 672 690 0.97
12 16 2 2.7e+04 -4.3 1.2 6 10 719 723 719 723 0.88
13 16 2 2.7e+04 -6.6 9.7 10 18 737 746 727 747 0.80
14 16 2 2.7e+04 -4.5 1.5 10 13 754 757 752 758 0.80
15 16 1.1e-07 0.0016 19.0 12.1 1 16 783 798 783 809 0.95
16 16 5e-07 0.0068 17.0 12.7 1 19 816 835 816 835 0.96

Sequence Information

Coding Sequence
ATGGCCGAGTattggcggcagcagcagcaacaacagcagcagcagctccagccgcagccgcagttaACCAACGGCGCTGAGTCAGCCAacggccacaacaacaacaataactatgtgaatttcaatcaatttatcaCACAACACAATTTGGCAAGCGCCAGCCTCGGCTAcagcgttggcggcggcggcgccttcGGCTTGACgcccaacagcagcggcgccagcagcaacagcaacaactttggcggcggcagcTTGTGCTCGCCCGTCTTTTACGCCCACCAAAATGGGCATGGCAGCAGCTATGCGCAGCTGTATACGCCCTTCGGCAACAATCcgtttgccgctgccgccgccgctgccggcggctTCGATTTCAGCGCTTCCAAGCTGCAGGCAACTGCGCCCGAATTTGTGCCCAACTTTGCGAAACTCAGCCTGACGACGGCCGCGCAGGAGGAGCCCGCGGCCAAGTCCGAGTCCGAGCCGGCGGCGGGGACGGCGGCATCGATCAGCAAGAgtcagagcaacaacaacaacactgccACACAGCCAGgcgaggcggcggcggcggccagccAGCAGAGAGCCGAGCAGCGGCCGCCGAACAAcagtcggcagcagcagcgacgcaaCGACTACCGCGAGGAGCGCAACGAGGAGCGGTACGAGCGCGGCAAGAAGCCGCAGAAGCAACAGCGCTACGACAATCATCGCAGCAACAAGCGGCGCGACGACTGGAACCGCAACCGGGACCGCATCAATGGCTACTCCCGCGCCGCCGACGAGCTGGAcacgagcaacagcaacgacagcgCGCAGCCGTCGCcggagaagcagcagcagcaacaaaatcagcagctgcagcaaaatcagcagctgcagcaaatcTCGCCGAGACGGGCGCCCGAGCACGAGAAGCTATCGCAGCGGGAGAAGCTGATGCGCGACATCGAGCAGCGGCGTCTGGAGTGTCTGGTGTGCGTGGAGCAGATCAAGGCGCACCACGGCACCTGGTCCTGCCAGAACTGCTATCACGTGCTCCATCTCAAGTGCACCATTACGTGGGCGAGCAGCTCCAAGTCGGCGGAGGGCTGGCGCTGCCCGGCCTGCCAGAATGTGCTGCAGGAGCTGCCCCGGGAGTATCTCTGCTTCTGCGGCAAACTCAAAAATCCGCCGCTGACGCGCACCGAACTCGCGCACAGCTGCGGCGAGCTCTGCTGTCGGGTCGAGGGCTGTGCGCACGCGTGCACGCTGCTGTGTCATCCGGGGCCGTGTCCGGCGTGCCAGGCGAACGTGAGTcggagctgcggctgcggccgcACCACCAAGCTGATGCAGTGCGCCCTGAAGCAGCCGCTGCAGTGCGACGCCAGCTGCGACAAGCTGCTCAACTGCGGCGAGCATCGGTGCCAGCAGCGCTGCCATGACGGCAAGTGCGAGCCGTGCGGCGAGCAGGTGGCGCAGCGCTGCCACTGCGGCAAGCAGCAGCGGTCGGTGCAGTGCACCCGGGAGAGCCAGGACAAGCGCAGCTACTCGTGCAAGGAGTGCTGCGGCCAGCCGCTGCCCTGCGGCAATCACAAGTGCAAGGACTCGTGCCACGCGGCCGCCTGTCGTCCGTGCAAGCTGAGTCCCGCCCAGATCACCAGCTGTCCGTGCGGCAAGCTGGCCGTGCCGCCCACACAGCGCACCAGCTGCCTCGATCCGGTGCCCACGTGCGAGGGCGTCTGCGGCAAGACGCTGCGCTGCGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAGTGTCATCTGGGCCAGTGTCCGCCGTGTCCCAAGCAGACGGCGGTCAAGTGCCGCTGCGGCCACATGGATCAGCTGATCAAGTGCCGGCAGCTGTCGACGCGCGCGGACGATGCGCGCTGCAAGCGCCGCTGCACGAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAACGCCGAGTGCTGCATCGACATCGATCACGCCTGCCCGCTGCCCTGCAACCGGACGCTCAGCTGCGGCCGGCACAAGTGCGACCAGCCGTGCCATCGCGGCAACTGTCCGCCCTGCTACCGGAGCAGCTTCGAGGAGCTGTACTGCGAGTGCGGCGCCGAGGTCATCTATCCGCCGGTGCCGTGCGGCACCAAGAAGCCCGTCTGCAAGCGGCCCTGTTCGCGCACCCACGGCTGCGAGCACGCGCCCCAGCACAACTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACGACCAAGTGGTGCCACGGCGGCCACGAGCAGCGCAAGACCATACCCTGCTCCCAGGCCAGCTTCAGCTGCGGCCTGGCCTGCGGTCGGCCGCTCGCCTGCGGCCGGCACAAGTGCGTCCGGCCCTGTCACGAGGGCGACTGCCAGCTGGCGGCGGGGGAACTGTGCCGCCAGAGCTGCACGAAGCCGCGACTGCTGTGCGGACACCGGTGTGCGGCCGCGTGCCACGAGGGCGCCTGCCCGGAGACGCCCTGCAAGGAGCTCGTCGAGGTCCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAGCTCGCCCGGGAGCACAGCCGCATCGCCACCGCTCAGCTGGCCTCCTCCATGGCGGAAATGTCGCGCGGCAACTACATGGAGCTCAGCGAGATTCTGGCGCCCAATAAGAGCAACAAGTCCAACAAAACCTTGGACTGCAACGATGAGTGTCGTCTGTTGGAGCGCAATCGCCGCTTGGCCATTGGCCTGCAGTCGCGCAATCCGGACGCACAGCTCAAGTTGCTGACCAAGTACTCGGAGTTCTTGCGCGGCTTCGCCAAGCGCAATCCGGCGCTCACGAAGAGCGTCTATGAAACGCTCACCGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAGAAGTCGAGGAGTCACTCGTTTCCCACCATGAATCGCGAGAAGCGTCAGCTGGTCCACGAGCTGTGCGAAGTTTTTGGCGTGGAGTCTGTCTCCTATGACAAGGAGCCCAATCGCAATGTGGTCGCCACGGCGCACAAGGAACGCTGTTGGCTGCCTGCCACCAGCATTATGGAGGTGCTGGCACGCGAATCGGGCCAACGGCGCGTGCCCGTGCCGAGCAACAATGCCTGGGGCCTCAAAAAGTAG
Protein Sequence
MAEYWRQQQQQQQQQLQPQPQLTNGAESANGHNNNNNYVNFNQFITQHNLASASLGYSVGGGGAFGLTPNSSGASSNSNNFGGGSLCSPVFYAHQNGHGSSYAQLYTPFGNNPFAAAAAAAGGFDFSASKLQATAPEFVPNFAKLSLTTAAQEEPAAKSESEPAAGTAASISKSQSNNNNTATQPGEAAAAASQQRAEQRPPNNSRQQQRRNDYREERNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYSRAADELDTSNSNDSAQPSPEKQQQQQNQQLQQNQQLQQISPRRAPEHEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCAHACTLLCHPGPCPACQANVSRSCGCGRTTKLMQCALKQPLQCDASCDKLLNCGEHRCQQRCHDGKCEPCGEQVAQRCHCGKQQRSVQCTRESQDKRSYSCKECCGQPLPCGNHKCKDSCHAAACRPCKLSPAQITSCPCGKLAVPPTQRTSCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCSRTHGCEHAPQHNCHAAASCPPCMMFTTKWCHGGHEQRKTIPCSQASFSCGLACGRPLACGRHKCVRPCHEGDCQLAAGELCRQSCTKPRLLCGHRCAAACHEGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKSNKSNKTLDCNDECRLLERNRRLAIGLQSRNPDAQLKLLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00496269;
90% Identity
iTF_00598561;
80% Identity
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