Basic Information

Insect: Drosophila grimshawi
Gene Symbol: stc
Assembly: GCA_018153295.1
Location: JAECXY010001376.1:16362842-16367869[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.5 1.1e+04 -3.7 0.5 15 18 385 388 384 389 0.79

2 15 2 1.5e+04 -4.1 1.6 15 19 412 416 411 416 0.81

3 15 0.015 1.1e+02 2.7 2.5 4 11 445 452 444 453 0.91

4 15 6e-07 0.0044 16.7 15.1 1 19 457 474 457 474 0.93

5 15 2 1.5e+04 -4.2 1.4 6 10 500 504 499 504 0.87

6 15 2.5e-08 0.00018 21.2 11.4 1 18 510 527 510 528 0.96

7 15 2 1.5e+04 -6.3 3.9 7 13 532 538 532 539 0.74

8 15 2.1e-09 1.5e-05 24.6 12.9 1 19 568 586 568 586 0.98

9 15 2.4e-05 0.18 11.6 17.0 4 19 634 649 627 649 0.88

10 15 0.068 5e+02 0.6 11.8 1 11 689 699 689 711 0.79

11 15 4.9e-10 3.6e-06 26.6 15.5 1 18 716 733 716 734 0.97

12 15 1.5 1.1e+04 -3.7 1.5 6 10 763 767 762 768 0.61

13 15 2 1.5e+04 -5.9 9.5 9 18 780 790 770 791 0.79

14 15 1.6e-07 0.0012 18.6 15.2 1 16 827 842 827 852 0.93

15 15 8.2e-08 0.00061 19.5 12.5 1 19 859 878 859 878 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.5	1.1e+04	-3.7	0.5	15	18	385	388	384	389	0.79
2	15	2	1.5e+04	-4.1	1.6	15	19	412	416	411	416	0.81
3	15	0.015	1.1e+02	2.7	2.5	4	11	445	452	444	453	0.91
4	15	6e-07	0.0044	16.7	15.1	1	19	457	474	457	474	0.93
5	15	2	1.5e+04	-4.2	1.4	6	10	500	504	499	504	0.87
6	15	2.5e-08	0.00018	21.2	11.4	1	18	510	527	510	528	0.96
7	15	2	1.5e+04	-6.3	3.9	7	13	532	538	532	539	0.74
8	15	2.1e-09	1.5e-05	24.6	12.9	1	19	568	586	568	586	0.98
9	15	2.4e-05	0.18	11.6	17.0	4	19	634	649	627	649	0.88
10	15	0.068	5e+02	0.6	11.8	1	11	689	699	689	711	0.79
11	15	4.9e-10	3.6e-06	26.6	15.5	1	18	716	733	716	734	0.97
12	15	1.5	1.1e+04	-3.7	1.5	6	10	763	767	762	768	0.61
13	15	2	1.5e+04	-5.9	9.5	9	18	780	790	770	791	0.79
14	15	1.6e-07	0.0012	18.6	15.2	1	16	827	842	827	852	0.93
15	15	8.2e-08	0.00061	19.5	12.5	1	19	859	878	859	878	0.96

Sequence Information

Coding Sequence: ATGACAGTTGAGAAGACCGGAAAGGACTCGCTGAAGAATGAAATCAATGAGCTCATCTATTTTCCAGCATACGGCCCATTCTACGGTGTTATGGGCGTGGTCGCCTCTATAGTGTTCTCTTCGATTGGCGCCGCTTATGGAACGGCTGTCTCCGGTACTGGGATAGCCGCAACTGCCGTGATGCGCCCGGAGCTCATCATGAAGTCGATTATACCCGTTGTCATGGCGGGCATCATTGCCATTTACGGACTGGTTGTGTCGGTGCTAATCGCTGGCATTTTGGACTCGGCCGAGACGTACTCGGTGATCAAGGGATATGTGCATCTAGCGGCCGGATTGTCGGTGGGTTTTTGTGGATTGGCATCCGGCTATGCGATCGGCATTGTGGGCGACGTCGGAGTTCGAAATACGGCTCAGCAGCCCCGACTGTTTATCGGCATGATTCTCATTCTTATATTTGCGGAGGTGCTGGGCCTATATGGCATGATTGTCGCCATCTATCTCAGCGGCGGCGTCGGCAGCGGCGGTGCCTTTGGCCTCACGCCCGCCAGCAGCAGCGGTAGCGCTGCCAACAACTCCAGCTTTGGCGTCGGCCAATATGCGGCGCCTATTTTCGGCTACCAGAATGGCGATGGCGCTGGCCAAAATTGTCCCAATTTGTACTCAGCTTTTGGCAATAATCCATTTGCTGCGCCTGCTGCCGCCGGCGCCGCTTTCGATTTTAGCGCTTCCAAGCTGCAGGCGACGGCACCCGAATTTCCGCTGGCTGGCGGCAATAATACTCGGCAGCAGCAGCGACGCCAGGACTATCGCGAAGATCGCCACGAGGATCGCTATGAACGTGGCAAGAAGCCGCAGAAGCAGCAGCGCTATGACAATCATCGCAGCAACAAAAGACGCGACGACTGGAATCGCAATCGTGATCGCATCAATGGCTATCCGCGCGCCGCTGACGAACTGGACACCAGCAACAGCAACGACAGTGCGCAGCCCTCGCCCGAGAAGCAACTGCCACACCAAGTCTCCCCTCGCCGAGCGCCCGACAATGAGAAGCTGTCGCAGCGGGAGAAGCTGATGCGTGACATCGAGCAACGTCGACTGGAGTGCTTAGTGTGCGTGGAGCAGATCAAGGCGCATCATGGCACATGGTCGTGCCAGAACTGCTATCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCTAGCAGTTCCAAGTCGGCGGAGGGCTGGCGCTGTCCAGCCTGCCAGAATGTGCTGCAAGAGTTGCCGCGCGAATATCTCTGCTTCTGTGGCAAGCTGAAGAATCCGCCGCTCACACGTAACGAGCTGGCCCATACTTGCGGCGAACTCTGCTGTCGCGTTGAGGGCTGCAGTCATGCGTGCACCCTGCTCTGTCATCCGGGCCCGTGTCCGCCGTGCCAGGCGAACGTGTTGCGCAGCTGTGGCTGCGGACGCACTTCCAAGCTGATGCAGTGCGCCATGAAGCAGCAACTGCAGTGCGAGGCCACCTGCGACAAGCCACTCAACTGCGCCGAGCATCGTTGCCAGCAGTTGTGCCATGCGGGCAAATGTGAGCCGTGTGCGGAACAGGTGGAGCAACACTGCCACTGTGGCAAGCAGCAGCGCGAGGTGCTCTGCACCAAGGAGAGTCAGGATAGGCGCAGCTATTCGTGCAAGGAGTGCTGCGGCAAGCCGTTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGCCACGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCGCAGCAGATCACCAGTTGCCCCTGTGGCAAGTTGGCAGTGCCTCCGACGCAGCGCAGCAGCTGTCTGGACCCGGTGCCGACGTGCGAGGGCGCGTGCAGCAAGACGCTGCGCTGTGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAATGCCATTTGGGGCAGTGTCCGCCGTGCCCCAAACAGACGGCCGTCAAATGCCGTTGCGGCCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCGACCCGGGCGGATGATGCACGCTGCAAGCGCCGTTGCACGAAGAAACGCAGCTGTGGAAAGCACAAATGCAACGCGGAATGTTGCATCGACATCGACCATGCCTGCCCGCTGCCCTGCAACCGAACACTGAGCTGCGGCAAACACAAGTGCGATCAGCCCTGCCATCGGGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGTGAGTGCGGCGCCGAAGTGATATATCCACCGGTGCCGTGTGGCACCAAACGGCCGCCCTGCAAACGGCCCTGTTCGCGCACCCACGGCTGCGAGCATGTGCCGCAGCACAGTTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAATCACGAGCAGCGCAAGACGATACCCTGCTCGCAGGCCAGCTTCAGCTGTGGCTTTCCCTGCGCCAAGCCGCTCGCGTGTGGCCGCCATAAATGCATACGGCCGTGCCACGAGGGCGAGTGTCCGCAGCCGGGCGAGCTGTGCCGTCAGAGCTGTACCAAGCCTCGTCTGTTGTGCGGCCACAAGTGTGCCGCTGTCTGCCACGATGGCGCCTGTCCAGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAACTTGCCCGGGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAATTACATGGAGCTCAGCGAAATACTTGCACCCACCAAAAACAACAAATCCAACAAAACTTTGGACTGCAATGAGGAGTGTCGTCTGCTGGAGCGCAATCGCCGCTTGGCCATTGGACTGCAGTCTCGGAATCCGGAGTCGCAGCTGAAGTCGCTGACGAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGTACTAACCAAGAGCGTCTACGAAACGCTCAGCGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCGCGCAGTCACTCGTTCCCCACGATGAATCGCGAGAAGCGTCAAATGGTGCACGAGCTGTGCGAAGTGTTTGGCGTTGAGTCCGTCTCCTACGACAAGGAGCCCAATCGCAACGTGGTCGCCACCGCGCACAAGGAACGCTGCTGGTTGCCCGCCACTAGCGTCATGGATGTCCTGGCCCGCGAGTCCGGTCAGCGTCGCGTCCCGGTGCCCAGCAACAATGTCTGGGGAATCAAGAAGTAG
Protein Sequence: MTVEKTGKDSLKNEINELIYFPAYGPFYGVMGVVASIVFSSIGAAYGTAVSGTGIAATAVMRPELIMKSIIPVVMAGIIAIYGLVVSVLIAGILDSAETYSVIKGYVHLAAGLSVGFCGLASGYAIGIVGDVGVRNTAQQPRLFIGMILILIFAEVLGLYGMIVAIYLSGGVGSGGAFGLTPASSSGSAANNSSFGVGQYAAPIFGYQNGDGAGQNCPNLYSAFGNNPFAAPAAAGAAFDFSASKLQATAPEFPLAGGNNTRQQQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNSNDSAQPSPEKQLPHQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRSCGCGRTSKLMQCAMKQQLQCEATCDKPLNCAEHRCQQLCHAGKCEPCAEQVEQHCHCGKQQREVLCTKESQDRRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLAVPPTQRSSCLDPVPTCEGACSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHVPQHSCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGFPCAKPLACGRHKCIRPCHEGECPQPGELCRQSCTKPRLLCGHKCAAVCHDGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPESQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMDVLARESGQRRVPVPSNNVWGIKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00496269;
90% Identity: iTF_00553446; iTF_00557580; iTF_00599264;
80% Identity: -