Basic Information

Insect: Drosophila paramelanica
Gene Symbol: stc
Assembly: GCA_035043915.1
Location: JAWNMO010000276.1:131460-135859[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.4 1.2e+04 -3.7 0.5 15 18 367 370 366 371 0.79

2 15 2 1.7e+04 -4.1 1.6 15 19 394 398 393 398 0.81

3 15 0.057 4.7e+02 0.8 2.0 4 11 427 434 426 435 0.90

4 15 3.7e-06 0.031 14.2 12.7 4 19 441 456 439 456 0.91

5 15 2 1.7e+04 -4.2 1.4 6 10 482 486 481 486 0.87

6 15 1.3e-08 0.00011 22.1 14.3 1 18 492 509 492 510 0.98

7 15 1.8 1.5e+04 -4.0 1.4 8 13 515 520 514 521 0.74

8 15 1.3e-07 0.0011 18.8 10.9 1 19 550 568 550 568 0.98

9 15 2.4e-05 0.2 11.6 17.0 4 19 616 631 609 631 0.88

10 15 0.062 5.2e+02 0.7 11.7 1 11 671 681 671 693 0.79

11 15 2.8e-10 2.4e-06 27.4 15.1 1 18 698 715 698 716 0.97

12 15 2 1.7e+04 -4.4 1.2 6 10 745 749 745 749 0.88

13 15 2 1.7e+04 -6.9 9.0 10 18 763 772 753 773 0.77

14 15 7.6e-09 6.4e-05 22.8 11.4 1 16 809 824 809 831 0.87

15 15 9.1e-08 0.00076 19.4 13.0 1 19 841 860 841 860 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.4	1.2e+04	-3.7	0.5	15	18	367	370	366	371	0.79
2	15	2	1.7e+04	-4.1	1.6	15	19	394	398	393	398	0.81
3	15	0.057	4.7e+02	0.8	2.0	4	11	427	434	426	435	0.90
4	15	3.7e-06	0.031	14.2	12.7	4	19	441	456	439	456	0.91
5	15	2	1.7e+04	-4.2	1.4	6	10	482	486	481	486	0.87
6	15	1.3e-08	0.00011	22.1	14.3	1	18	492	509	492	510	0.98
7	15	1.8	1.5e+04	-4.0	1.4	8	13	515	520	514	521	0.74
8	15	1.3e-07	0.0011	18.8	10.9	1	19	550	568	550	568	0.98
9	15	2.4e-05	0.2	11.6	17.0	4	19	616	631	609	631	0.88
10	15	0.062	5.2e+02	0.7	11.7	1	11	671	681	671	693	0.79
11	15	2.8e-10	2.4e-06	27.4	15.1	1	18	698	715	698	716	0.97
12	15	2	1.7e+04	-4.4	1.2	6	10	745	749	745	749	0.88
13	15	2	1.7e+04	-6.9	9.0	10	18	763	772	753	773	0.77
14	15	7.6e-09	6.4e-05	22.8	11.4	1	16	809	824	809	831	0.87
15	15	9.1e-08	0.00076	19.4	13.0	1	19	841	860	841	860	0.96

Sequence Information

Coding Sequence: ATGGCCGAgtattggcagcagcagcagcagcagcaacgacaacaccaacaacagcaccaacaacaccagcagcagcagccgcagttaACCAATGGCTCTGAGTCAGTCAAcggccaaaacaacaacaataactatgTAAACTTTAACCAATTTATCACACAACACAATTTGGCCAGCGCAAGCCTCGGCTACGGCtttggcggtggcggtggcggcggcggaggcggcggcgcCTTTGGCCTGACGaccaacatcagcaacaacgtCAGCAACGGAAGCATCGGCGTCGGCGCCAGCGGGGACGggagcgccagcagcaacagcaacaactttggcGGTGGCAGCTTATGTGCGCCAGCTTTTTATGCCCATCAAAATGGCCACAGTGGCAACAGTTATACGCAGCTGTATTCGCCCTTTGGTCACAATCcgtttgccgctgccgccgctggcggTGGCGGCTACGATTTCAGCGCTTCCAAGCTGCAGGCAACAGCGCCCGAATTTGTGCCCAATTTCGCCAAGCTCAGTTTAACAGCTGCCGTGCAGGAGGAGCCAGAGCCGTCGTCGGCCAGCAAATCGTcgggcaacaacagcaacaacaatatcaacaacagcaacaacaataacagcaacaacaacactgccACACAGCCCAGCgaggcagccagcagcaatgccaaccagcagcaaccgcagcgtGTGAAGCCGcatggcagcggcaacaacagtcgccagcagcagcgacgcaacGATTATCGGGAGGAGCGCAGCGAGGAGCGGTATGAGCGCGGAAAGAAGCCGCAGAAGCAACAGCGCTACGACAATCATCGCAGCAACAAGCGACGCGACGACTGGAATCGCAATCGGGATCGGATCAATGGCTATTCGCGGGCCGCCGATGAGCTGGAcacgagcaacagcaacgacagcgCACAGCCGTCGCCGGAGAAGCAGACACAACAAATCTCGCCGCGACGGGCGCCCGAACACGAGAAGCTGTCGCAGCGAGAGAAGCTGATGCGCGACATTGAGCAGCGGCGACTCGAGTGCCTCGTGTGTGTTGAGCAGATAAAGGCGCATCACGGCACCTGGTCATGCCAGAACTGTTATCATGTGCTCCACCTCAAGTGCACCATCACTTGGGCGAGTAGCTCCAAGTCGGCGGAGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGAGGTGCCGCGCGAATATTTGTGTTTCTGCGGCAAACTGAAGAATCCGCCGCTGACGCGCAACGAACTCGCCCACAGCTGCGGCGAGCTCTGCTGCCGCGTCGAGGGCTGTGCGCATGCGTGCACGCTCCTCTGCCATCCGGGGCCGTGTCCGGCGTGCCAGGCGAACGTGAGTcgcagctgcggctgcggccgCACCTCGAAGCTGATGCAGTGCGCCATGAAACAGCCGCTGCAGTGCGAGGCCACCTGCGAGAAGCTGCTCAACTGCGGCGAGCATCGCTGCCAGCAGCGCTGTCACGCCGGCAAGTGCGAGCCGTGCGCGAAGCAGGTGCCGCAGCGCTGCCACTGCGGCAAGCAGCAGCGGGATGTGCTCTGCACTCGCGAGAGCCAGGACAAGCGCAGCTATTCGTGCAAGGAGTGCTGCGGCAAGCCGCTGCCCTGTGGCAATCACAAGTGCAAGGACTCATGTCACGCGGCCGCGTGCCGCCCTTGCAAGCTGAGTCCCGCCCAGATCACGAGTTGCCCCTGCGGCAAGCTAGCCGTGCCGGCCGCACAGCGCACCAGCTGCCTGGACCCGGTGCCCACCTGTGACGGCGTCTGCGGCAAGACGCTCCGCTGCGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAGTGCCATCTGGGCCAGTGTCCGCCGTGTCCCAAGCAGACGGCGGTCAAGTGCCGTTGCGGTCACATGGATCAGCTGATCAAGTGCCGGCAGCTGTCGACGCGGGCGGACGATGCGCGCTGCAAGCGTCGCTGCACCAAGAAGCGCAGCTGCGGCAAACACAAGTGCAACGCCGAATGCTGCATCGATATCGATCATGCGTGTCCGCTACCCTGCAACCGGACGCTCAGCTGTGGCCGGCACAAGTGCGACCAGCCGTGCCATCGGGGCAACTGTCCGCCGTGCTATCGCAGTAGCTTTGAGGAGCTCTACTGCGAGTGCGGAGCTGAGGTCATCTATCCGCCGGTGCCCTGCGGCACCAAGAAGCCGATCTGCAAGCGACCTTGCTCGCGCACCCACGGCTGCGAGCACGCGCCACAGCACAACTGCCATGCACTGGCCAGCTGCCCGCCGTGCATGATGTTCACCACGAAATGGTGCCACGGCAACCACGAGCAGCGCAAGACGATACCCTGCTCCCAGGCCAGCTTCAGCTGTGGCTTGGCCTGTGGTCGGCCGCTCGCCTGTGGGCGCCACAAGTGCATCCGGCCCTGTCACGAGGGCGACTGCCAGCAGGCGGGCGAGGTGTGTCGCCAGAGCTGCACCAAGCCCCGACTGCTGTGCGGTCACAAGTGTGCGGCCGTCTGCCACGAGGGCGCCTGCCCGGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGAAAGCAGAACCGCAGCTGTCAGGAACTCGCCCGGGAGCACAGTCGCATCGCCACCGCCCAGCTCGCCTCATCCATGGCGGAGATGTCGCGCGGCAACTACATGGAACTCAGCGAGATCCTCGCGcccaacaagaacaacaagtcCAACAAAACCTTGGACTGCAACGAGGAATGTCGTCTGTTGGAGCGTAATCGTCGCTTGGCCATTGGACTGCAGTCACGGAATTCGGAAGCGCAGCTTAAGTTGCTGACCAAGTACTCGGAGTTCTTGCGGGGCTTTGCCAAGCGCAATCCGGCGCTCACCAAGAGCGTCTATGAAACGCTGACCGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAGAAGTCGCGAAGTCACTCGTTTCCAACCATGAACCGCGAGAAGCGGCAGCTGGTGCACGAACTGTGCGAAGTTTTTGGCGTAGAGTCCGTCTCCTACGACAAGGAGCCCAATCGCAATGTGGTGGCCACGGCGCACAAGGAACGCTGTTGGCTTCCTGCCACTAGCATTATGGAGGTGCTGGCACGCGAATCTGGGCAACGGCGCGTTCCCGTTCCGAGCAACAATGCATGGGGCCTCAAAAAGTAG
Protein Sequence: MAEYWQQQQQQQRQHQQQHQQHQQQQPQLTNGSESVNGQNNNNNYVNFNQFITQHNLASASLGYGFGGGGGGGGGGGAFGLTTNISNNVSNGSIGVGASGDGSASSNSNNFGGGSLCAPAFYAHQNGHSGNSYTQLYSPFGHNPFAAAAAGGGGYDFSASKLQATAPEFVPNFAKLSLTAAVQEEPEPSSASKSSGNNSNNNINNSNNNNSNNNTATQPSEAASSNANQQQPQRVKPHGSGNNSRQQQRRNDYREERSEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYSRAADELDTSNSNDSAQPSPEKQTQQISPRRAPEHEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQEVPREYLCFCGKLKNPPLTRNELAHSCGELCCRVEGCAHACTLLCHPGPCPACQANVSRSCGCGRTSKLMQCAMKQPLQCEATCEKLLNCGEHRCQQRCHAGKCEPCAKQVPQRCHCGKQQRDVLCTRESQDKRSYSCKECCGKPLPCGNHKCKDSCHAAACRPCKLSPAQITSCPCGKLAVPAAQRTSCLDPVPTCDGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHAPQHNCHALASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGRPLACGRHKCIRPCHEGDCQQAGEVCRQSCTKPRLLCGHKCAAVCHEGACPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNSEAQLKLLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00496269;
90% Identity: iTF_00561425;
80% Identity: -