Basic Information

Insect: Drosophila villosipedis
Gene Symbol: stc
Assembly: GCA_035043025.1
Location: JAWNNF010000023.1:16225507-16229375[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4 1.2e+04 -3.7 0.5 15 18 360 363 359 364 0.79

2 16 2 1.6e+04 -4.1 1.6 15 19 387 391 386 391 0.81

3 16 0.015 1.2e+02 2.7 2.5 4 11 420 427 419 428 0.91

4 16 5.9e-07 0.0048 16.8 15.1 1 19 432 449 432 449 0.93

5 16 2 1.6e+04 -4.2 1.4 6 10 475 479 474 479 0.87

6 16 1.6e-07 0.0013 18.6 10.7 1 18 485 502 485 503 0.96

7 16 2 1.6e+04 -6.3 3.9 7 13 507 513 507 514 0.74

8 16 2e-09 1.6e-05 24.6 12.9 1 19 543 561 543 561 0.98

9 16 2 1.6e+04 -5.4 1.3 11 16 592 597 592 597 0.67

10 16 2.4e-05 0.19 11.6 17.0 4 19 609 624 602 624 0.88

11 16 0.061 5e+02 0.7 11.7 1 11 664 674 664 686 0.79

12 16 4.8e-10 3.9e-06 26.6 15.5 1 18 691 708 691 709 0.97

13 16 1.4 1.2e+04 -3.6 1.5 6 10 738 742 737 743 0.61

14 16 2 1.6e+04 -5.9 9.5 9 18 755 765 745 766 0.79

15 16 2.7e-08 0.00022 21.0 12.6 1 16 802 817 802 825 0.95

16 16 8e-08 0.00066 19.5 12.5 1 19 835 854 835 854 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4	1.2e+04	-3.7	0.5	15	18	360	363	359	364	0.79
2	16	2	1.6e+04	-4.1	1.6	15	19	387	391	386	391	0.81
3	16	0.015	1.2e+02	2.7	2.5	4	11	420	427	419	428	0.91
4	16	5.9e-07	0.0048	16.8	15.1	1	19	432	449	432	449	0.93
5	16	2	1.6e+04	-4.2	1.4	6	10	475	479	474	479	0.87
6	16	1.6e-07	0.0013	18.6	10.7	1	18	485	502	485	503	0.96
7	16	2	1.6e+04	-6.3	3.9	7	13	507	513	507	514	0.74
8	16	2e-09	1.6e-05	24.6	12.9	1	19	543	561	543	561	0.98
9	16	2	1.6e+04	-5.4	1.3	11	16	592	597	592	597	0.67
10	16	2.4e-05	0.19	11.6	17.0	4	19	609	624	602	624	0.88
11	16	0.061	5e+02	0.7	11.7	1	11	664	674	664	686	0.79
12	16	4.8e-10	3.9e-06	26.6	15.5	1	18	691	708	691	709	0.97
13	16	1.4	1.2e+04	-3.6	1.5	6	10	738	742	737	743	0.61
14	16	2	1.6e+04	-5.9	9.5	9	18	755	765	745	766	0.79
15	16	2.7e-08	0.00022	21.0	12.6	1	16	802	817	802	825	0.95
16	16	8e-08	0.00066	19.5	12.5	1	19	835	854	835	854	0.96

Sequence Information

Coding Sequence: ATGGCCGAAtattggcaacagcagcaacaacaacagcagctacaacagcagccgccaacgcagcaacagcagctaacaaatggagcagcagctcatAATGACTCAGTCGCCCCTGCCTctaccgctgccgctgcctcaGTCGATGCCTGCAATGggcagagcaacaacaacaacaactatgttAACTTCAATCAGTTCATCACGCAGCATAATATACACAGCTCCAATCTCGGctacagcagcggcagcggcagcggcgacGGCGGCGTCGGCAGCGGCGGTGCCTTTGGCCTGACgcccgccagcagcagcggtaacGCTGCCAACAACTCCAGCTTTGGCGTCGCCCAATATGCTGTGCCTATTTTCGGCTACCAGAATGGCGATGGCGCTGGCCAAAATTATCCCAATTTGTACTCAGCTTTTGGCAATTATCCATTTGCTGCGCCTGCTGCCGGCGGCGCCGCTTTCGATTTTAGCGCTTCCAAGCTGCAGGCGACGGCACCCGAATTTGTGCCCAACTTCGCCAAGCTCAGCCTGTCGAcgagcaaaacaaacagcagcagcagtaatagcaataataataataatagcaacaacagcaacactgccACAACACAGCACACGACACATGAGGCAGCTAGCAGCAATGCTCAACGAGGCTTGGCGAAGCCGCTGGCTGGCGGCAATAATactcggcagcagcagcgacgccaggACTATCGCGAAGATCGCCACGAGGATCGCTATGAGCGTGGTAAGAAgccgcagaagcagcagcgctATGACAATCATCGCAGCAACAAAAGACGCGACGACTGGAATCGCAATCGTGATCGCATCAATGGCTATCCGCGCGCGGCCGACGAACTggacaccagcaacagcaacgacagtGCGCAGCCCTCGCCCGAGAAGCAGCCCGAGAAGCAAGTGCCACACCAAGTCTCCCCTCGCCGAGCGCCCGACAATGAGAAGCTGTCGCAGCGGGAGAAGCTGATGCGCGACATCGAGCAACGTCGACTGGAGTGCTTAGTTTGCGTGGAGCAGATCAAGGCGCATCATGGCACATGGTCGTGCCAGAACTGCTATCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCGAGCAGTTCCAAGTCGGCGGAGGGCTGGCGCTGTCCAGCCTGCCAGAATGTGCTGCAAGAATTGCCACGCGAATATCTCTGCTTCTGTGGCAAGCTGAAGAATCCGCCGCTCACACGCAACGAGCTGGCGCACACTTGCGGCGAACTCTGCTGTCGTGTCGAGGGCTGCAGTCATGCGTGCACCCTGCTCTGTCATCCGGGCCCGTGTCCGCCGTGCCAGGCGAACGTGTTGCGCAGCTGTGGCTGCGGACGCACCTCGAAGCTGATGCAGTGCGCCAtgaagcagcaactgcagtgCGAGGCCACCTGCGACAAGCCACTCAACTGCGCCGAGCATCGTTGCCGGCAGTTGTGCCATGCGGGCAAATGTGAGCCGTGTGCGGAGTTGGTGGAGCAACACTGCCactgtggcaagcagcagcgcGAGGTGCTCTGCACCAAGGAGAGTCAGGATAGGCGCAACTATTCGTGCAAGGAGTGCTGCGGCAAGCCGTTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGCCACGCCGGCGCCTGTCGTCCCTGTAAGCTGAGTCCGCAGCAGATCACCAGTTGCCCCTGTGGCAAGTTGGCAGTGCCTCCGACGCAGCGCAGCAGCTGTCTGGATCCGGTGCCGACGTGCGAGGGCGCGTGCGGCAAGACGCTGCGCTGTGGCAAGCCTGCGCATCCGCATCAGTGCGCCAGCAAATGCCATTTGGGGCAGTGTCCGCCGTGCCCCAAACAGACGGCCGTCAAATGTCGTTGCGGCCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCGACCCGGGCAGACGATGCACGCTGCAAGCGCCGTTGCACGAAGAAACGCAGCTGTGGAAAGCACAAATGCAACGCGGAATGTTGCATCGACATCGACCATGCCTGCCCGCTGCCCTGCAACCGAACACTGAGCTGCGGCAAACACAAGTGCGATCAGCCTTGCCATCGGGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTCTATTGTGAGTGCGGCGCCGAAGTGATCTATCCACCGGTGCCGTGTGGCACCAAACGGCCGCCCTGCAAACGGCCCTGTTCGCGCACACACGGCTGCGAGCATGTGCCGCAGCATAGTTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAATCACGAGCAGCGCAAGACGATACCCTGCTCGCAGGCCAGCTTCAGCTGTGGCTTTCCCTGCGCCAAGCCGCTCGCGTGTGGCCGCCATAAATGCATCCGGCCGTGCCACGAGGGCGAGTGTCCGCAGCAGCCGGGTGAGCTGTGCCGCCAGAGCTGCACCAAGCCTCGTCTGTTGTGCGGCCACAAGTGTGCCGCTGTCTGTCATGATGGCGCCTGTCCAGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAACTTGCCCGGGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAATTACATGGAGCTCAGCGAAATACTTGCAcccatcaaaaacaacaaatccaaCAAAACTTTGGACTGCAACGAGGAGTGTCGTCTGCTGGAGCGCAATCGCCGCTTGGCCATTGGACTACAGTCTCGGAATCCGGAGTCGCAGCTGAAGTCGCTGACGAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGTGTTAACCAAGAGCGTCTACGAAACGCTCAGCGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCGCGCAGTCACTCGTTCCCCACGATGAATCGCGAGAAGCGTCAAATGGTGCACGAGCTGTGTGAAGTGTTTGGCGTGGAGTCAGTCTCCTATGACAAGGAGCCCAATCGCAACGTGGTCGCCACCGCGCACAAGGAACGCTGCTGGTTGCCCGCCACTAGCGTCATGGAGGTCCTGGCCCGCGAGTCCGGTCAGCGTCGCGTCCCGGTTCCCAGCAACAATGCCTGGGGAATCAAGAAGTAG
Protein Sequence: MAEYWQQQQQQQQLQQQPPTQQQQLTNGAAAHNDSVAPASTAAAASVDACNGQSNNNNNYVNFNQFITQHNIHSSNLGYSSGSGSGDGGVGSGGAFGLTPASSSGNAANNSSFGVAQYAVPIFGYQNGDGAGQNYPNLYSAFGNYPFAAPAAGGAAFDFSASKLQATAPEFVPNFAKLSLSTSKTNSSSSNSNNNNNSNNSNTATTQHTTHEAASSNAQRGLAKPLAGGNNTRQQQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNSNDSAQPSPEKQPEKQVPHQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRSCGCGRTSKLMQCAMKQQLQCEATCDKPLNCAEHRCRQLCHAGKCEPCAELVEQHCHCGKQQREVLCTKESQDRRNYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLAVPPTQRSSCLDPVPTCEGACGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHVPQHSCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGFPCAKPLACGRHKCIRPCHEGECPQQPGELCRQSCTKPRLLCGHKCAAVCHDGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPIKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPESQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGIKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00496269;
90% Identity: iTF_00607498;
80% Identity: -