Datr003090.1
Basic Information
- Insect
- Drosophila atroscutellata
- Gene Symbol
- stc
- Assembly
- GCA_035041605.1
- Location
- JAWNLA010000092.1:1333657-1337704[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1.2e+04 -3.6 0.5 15 18 344 347 343 348 0.79 2 15 2 1.7e+04 -4.1 1.6 15 19 371 375 370 375 0.81 3 15 0.015 1.2e+02 2.7 2.5 4 11 404 411 403 412 0.91 4 15 5.8e-07 0.0049 16.8 15.1 1 19 416 433 416 433 0.93 5 15 2.4e-08 0.0002 21.2 11.4 1 18 469 486 469 487 0.96 6 15 2 1.7e+04 -6.2 3.9 7 13 491 497 491 498 0.74 7 15 3.4e-09 2.9e-05 23.9 13.6 1 19 527 545 527 545 0.98 8 15 1.1 9.4e+03 -3.3 0.5 5 10 575 580 575 580 0.90 9 15 2.3e-05 0.2 11.7 17.0 4 19 593 608 586 608 0.88 10 15 0.057 4.8e+02 0.8 11.6 1 11 648 658 648 670 0.79 11 15 4.7e-10 4e-06 26.7 15.5 1 18 675 692 675 693 0.97 12 15 0.3 2.5e+03 -1.5 0.8 5 10 721 726 719 726 0.94 13 15 2 1.7e+04 -5.5 10.2 7 18 737 749 730 750 0.83 14 15 2.6e-06 0.022 14.7 11.2 1 16 786 801 786 809 0.94 15 15 4.7e-07 0.004 17.1 12.4 1 19 819 838 819 838 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAATATtggcaacagcatcaacagcagcagcagcagccgccgtcaacgcagcaacagcagctaacaaatggagcagcagctcctAATGAATCAGCCGCCGCTGCCTGCAATGggcagagcaacaacaacaacaattatgttAACTTCAATCAGTTCATTACGCAGCATAATTTACACAGCTCCAATCTCGGCTACAgcagtggcggtggcggcggcagcggcggcgccTTTGGCCTGACGCCCGCGAGTTGCAGCGGCAGCGCTGCCAACAACTCCTCCAGCTTTGGCGTCGGCCAATATGCTGCTCCTACTTTTGGCTATCAGAATGGCGATGGCGCTGGCCAACATTATCCCAATTTGTACTCAGCCTTTGGCACTAATCcatttgctgctcctgctgccggCGGCACCGCTTTCGATTTTAGCGCTTCCAAGCTGCAAGCAACGGCACCCGAATTTGTGCCCAACTTCGCCAAGCTCAGCCTGACGACGAgcaaagccaacagcagcagcaccaatggcaataataatattaatagcaacaacagcaacactgcCACAACACAGAACCCGCCACAtgaggcagccagcagcagtgctCAACGGGGCTTAGCGAAGCCTCTGGCTGGCGGCAATAATactcggcagcagcagcggcgccaaGACTATCGCGAGGATCGCCATGAGGATCGCTATGAGCGTGGCAAGAAGCCGCAGAAGCAACAGCGCTACGACAATCATCGCAGCAACAAAAGACGAGACGACTGGAATCGCAATCGTGACCGCATCAATGGCTATTCGCGCGCCGCCGATGAACTGGacaccagcaacagtaacGACAGCGCCCAGCCCTCGCCCGAGAAGCAGCCCGAGAAACAGCTGCCACACCAAGTCTCCCCTCGCCGTGCACCCGACAACGAGAAGCTGTCGCAGCGGGAGAAGCTGATGCGTGACATCGAGCAGCGACGCCTGGAGTGCTTGGTGTGCGTCGAGCAGATCAAGGCGCATCATGGCACGTGGTCGTGCCAGAACTGCTATCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCGAGCAGTTCCAAGTCGGCGGAAGGCTGGCGCTGCCCAGCCTGCCAGAATGTGCTGCAAGAATTGCCGCGCGATTATCTCTGCTTCTGTGGCAAGCTAAAGAATCCGCCACTCACACGCAACGAGCTGGCGCACACTTGCGGCGAACTCTGCTGCCGCGTTGAGGGCTGCAGTCATGCGTGCACCCTGCTTTGTCATCCGGGTCCGTGTCCGCCGTGCCAGGCGAACGTGTTGCGCGGCTGTGGCTGCGGACGCACCTCCAAAATGATGCAGTGCGCCAtgaagcagcaactgcagtgCGAGGCCGCCTGCGACAAGCCACTCAACTGCGCCGAGCATCGTTGCCAGCAGTTGTGCCATGCGGGCAAGTGTGAGCCGTGTGCGGAGCAGGTGGAGCAACACTGCCactgtggcaagcagcagcgcGAGGTGCTCTGCACCAGGGAGAGTCAGGACAAGCGCAGCTACTCGTGCAAGGAATGCTGTGGCAAGCCGTTGCCCTGCGGAAATCACAAGTGCAAGGATTCGTGCCACGCCGGCTCCTGTCGTCCATGCAAGTTGAGTCCGCAGCAGATCACCAGTTGCCCCTGTGGCAAATTGGCTGTGCCTCCCACGCAGCGCAACAGCTGCCTTGATCCGGTGCCGACGTGCGAGGGCGTGTGTGGCAAGACGCTGCGCTGCGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAATGCCATTTGGGGCAGTGTCCGCCGTGCCCCAAACAGACGGCCGTCAAATGCCGTTGCGGTCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCGAGCCGGGCGGACGATGCGCGCTGCAAGCGCCGTTGCACGAAGAAACGCAGCTGTGGCAAGCACAAATGCAACGCCGAGTGTTGCATCGACATCGACCATGCCTGCCCGCTGCCCTGCAACCGAACGCTGAGCTGCGGCAAACACAAGTGCGATCAGCCCTGCCATCGCGGCAATTGTCCGCCCTGCTATCGCAGTAGCTTCGAGGAGCTCTACTGCGAGTGCGGCGCCGAAGTGATCTACCCACCGGTGCCGTGTGGCACAAAGCGGCCGACCTGCAAGCGGCCCTGTTCGCGTACCCACGGCTGCGAGCATGTGCCGCAGCATACTTGCCATGCGGCGGCCAGCTGTCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAATCACGAGCAGCGCAAGACGATACCCTGCTCGCAGGCCAGCTTCAGCTGTGGCTTTCCCTGCGCCAAGCCGCTCGCGTGTGGCCGCCATAAATGCATCCGGCCGTGCCACGAGGCCGAGTGTCCACAGCAGCCTGGCGAGCTATGCCGCCAGAGCTGCAGCAAGCCTCGTCTGTTGTGCGGCCACAAGTGTGCCGCTGTCTGCCACGATGGCGTCTGCCCCGAGACGCCGTGCAAGGAGCTCGTCGAGGTACAGTGCGAGTGTGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAACTCGCCCGGGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAAATACTCGCACCcaccaaaatcaacaaatccAATAAAACCTTGGACTGCAATGAGGACTGTCGTCTGCTGGAGCGCAATCGCCGCTTGGCCATTGGATTGCAGTCTCGGAATCCGGAGTCGCAGCTCAAGTCGCTTACGAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGTGCTAACCAAGAGCGTCTACGAAACGCTCAGCGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCGCGCAGTCACTCGTTCCCCACGATGAATCGCGAGAAGCGTCAAATGGTGCACGAGCTGTGCGAAGTGTTCGGCGTGGAGTCCGTATCCTATGACAAGGAGCCCAATCGCAACGTGGTCGCCACCGCGCACAAGGAACGCtGCTGGTTGCCCGCCACTAGCGTCATGGAGGTCCTGGCCCGCGAGTCCGGCCAGCGTCGCGTCCCGGTTCCCAGCAACAATGCCTGGGGCCTCAAGAAGTAG
- Protein Sequence
- MAEYWQQHQQQQQQPPSTQQQQLTNGAAAPNESAAAACNGQSNNNNNYVNFNQFITQHNLHSSNLGYSSGGGGGSGGAFGLTPASCSGSAANNSSSFGVGQYAAPTFGYQNGDGAGQHYPNLYSAFGTNPFAAPAAGGTAFDFSASKLQATAPEFVPNFAKLSLTTSKANSSSTNGNNNINSNNSNTATTQNPPHEAASSSAQRGLAKPLAGGNNTRQQQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYSRAADELDTSNSNDSAQPSPEKQPEKQLPHQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPRDYLCFCGKLKNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRGCGCGRTSKMMQCAMKQQLQCEAACDKPLNCAEHRCQQLCHAGKCEPCAEQVEQHCHCGKQQREVLCTRESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGSCRPCKLSPQQITSCPCGKLAVPPTQRNSCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSSRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPTCKRPCSRTHGCEHVPQHTCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGFPCAKPLACGRHKCIRPCHEAECPQQPGELCRQSCSKPRLLCGHKCAAVCHDGVCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKINKSNKTLDCNEDCRLLERNRRLAIGLQSRNPESQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00496269;
- 90% Identity
- iTF_00607498;
- 80% Identity
- -