Dpar006521.1
Basic Information
- Insect
- Drosophila paracracens
- Gene Symbol
- stc
- Assembly
- GCA_035044025.1
- Location
- JAWNMN010000398.1:2839731-2843464[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1.2e+04 -3.6 0.5 15 18 349 352 348 353 0.79 2 15 2 1.7e+04 -4.1 1.6 15 19 376 380 375 380 0.81 3 15 0.015 1.3e+02 2.7 2.5 4 11 409 416 408 417 0.91 4 15 5.8e-07 0.005 16.8 15.1 1 19 421 438 421 438 0.93 5 15 2.4e-08 0.00021 21.2 11.4 1 18 474 491 474 492 0.96 6 15 2 1.7e+04 -6.2 3.9 7 13 496 502 496 503 0.74 7 15 3.4e-09 3e-05 23.9 13.6 1 19 532 550 532 550 0.98 8 15 1.1 9.6e+03 -3.3 0.5 5 10 580 585 580 585 0.90 9 15 2.3e-05 0.2 11.6 17.0 4 19 598 613 591 613 0.88 10 15 0.057 5e+02 0.8 11.6 1 11 653 663 653 675 0.79 11 15 4.7e-10 4.1e-06 26.7 15.5 1 18 680 697 680 698 0.97 12 15 0.3 2.6e+03 -1.5 0.8 5 10 726 731 724 731 0.94 13 15 2 1.7e+04 -5.5 10.2 7 18 742 754 735 755 0.83 14 15 2.7e-08 0.00023 21.1 12.6 1 16 791 806 791 814 0.95 15 15 4.7e-07 0.0041 17.1 12.4 1 19 824 843 824 843 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAAtattggcaacagcagcagcagccgccgccaacgcagcaacagcagctaacaAATGGAGCAGCAGCTACTAATGAATCAGTCGCTGCTGCCTCCaacgctgccgctgcctccGTTGCTGCTTGCAATGggcagagcaacaacaacaacaattatgttAACTTCAATCAGTTCATTACGCAGCATAATTTACACAGCTCCAATCTCGGCTGTAGcagtggcggcggcagcagtggCGGCGCCTTTGGCCTAACGCCCGCCAGTTGCAGCGGCAGCACAGCCAACAACTCCTCCAGCTTTGGCGTCGGCCAATATGCGGCGCCTGTTTTTGGCTATCAGAATGGCGATGGCGCTGGCCAACATTATCCCAATTTGTACTCAGCCTTTGGCAATAATCCatttgctgctcctgctgccggCGGCACCGCTTTCGATTTTAGCGCTTCCAAGCTGCAGGCAACGGCGCCCGAATTTGTGCCCAACTTCGCCAAGCTCAGCCTGACGACGAGcaaagccaacagcagcagcaccaatggcaataataatattaatagcaacaacagcaacactgcCACAACACAGCACACGCCACATgaggcagccagcagcaatgcTCAACGGGGCTTAGCGAAGCCTCTGGCTGGCGGCAATAATacgcggcagcagcagcggcgccagGACTATCGCGAGGATCGCCATGAGGATCGCTATGAGCGTGGCAAGAAGccgcagaagcagcagcgctACGACAATCATCGCAGCAACAAAAGACGAGACGACTGGAATCGCAATCGTGATCGCATCAATGGCTATTCACGCGCCGCCGACGAACTGGacaccagcaacagtaacGACAGCGCCCAGCCCTCGCCCGAGAAGCAGCCCGAGAAGCAGCTGCCACACCAAGTCTCCCCTCGCCGTGCGCCCGACAACGAGAAGCTGTCGCAGCGGGAGAAGCTGATGCGCGACATCGAGCAGCGACGCCTGGAGTGCTTGGTGTGCGTCGAGCAGATCAAGGCGCATCATGGCACGTGGTCGTGCCAGAACTGCTATCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCGAGCAGTTCCAAGTCGGCGGAGGGCTGGCGCTGCCCAGCCTGCCAGAATGTGCTGCAAGAGTTGCCGCGCGATTATCTCTGCTTCTGTGGCAAGCTAAAGAATCCGCCACTCACACGCAACGAGCTGGCGCACACTTGCGGCGAACTTTGCTGCCGCGTTGAGGGCTGCAGTCATGCGTGCACCCTGCTTTGTCATCCGGGTCCGTGTCCGCCGTGCCAGGCAAACGTGTTGCGCGGCTGTGGCTGCGGACGCACCTCCAAGATGATGCAGTGCGCCAtgaagcagcaactgcagtgCGAGGCCGCCTGCGACAAGCCACTCAATTGCGCCGAGCATCGTTGCCAGCAGTTGTGCCATGCGGGCAAATGTGAGCCGTGTGCGGAGCAGGTGGAGCAACACTGCCactgtggcaagcagcagcgcGAGGTGCTCTGCACCAAGGAGAGTCAGGACAAGCGCAGCTACTCGTGCAAGGAGTGTTGTGGCAAACCGTTGCCCTGCGGAAATCACAAGTGCAAGGATTCGTGCCACGCCGGCTCCTGTCGTCCCTGCAAGTTGAGTCCGCAGCAGATCACCAGCTGCCCCTGTGGCAAATTGGCTGTGCCTCCGACGCAGCGCAACAGCTGCCTTGATCCGGTGCCGACGTGCGAGGGCGTGTGTGGCAAGACGCTGCGCTGCGGCAAACCGGCGCATCCGCATCAGTGCGCCAGCAAATGCCATTTGGGGCAGTGTCCGCCGTGCCCCAAACAGACGGCCGTCAAATGCCGTTGCGGTCACATGGATCAGCTGATCAAGTGCCGTCAGCTATCGAGCCGGGCGGACGATGCGCGCTGCAAGCGCCGTTGCACGAAGAAACGCAGCTGTGGCAAGCACAAATGCAACGCGGAGTGTTGCATCGACATCGACCATGCCTGCCCGCTGCCCTGCAACCGAACGCTGAGCTGCGGCAAACACAAGTGCGATCAGCCCTGCCATCGCGGCAATTGTCCGCCCTGCTATCGCAGTAGCTTCGAGGAGCTCTACTGCGAGTGCGGCGCCGAAGTGATCTACCCACCGGTGCCGTGTGGCACAAAGCGGCCGACCTGCAAGCGGCCCTGTTCGCGTACCCACGGCTGTGAGCATGTGCCGCAGCACACTTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTTACCACGAAGTGGTGCCACGGCAATCACGAGCAGCGCAAGACGATACCCTGCTCGCAGGCCAGCTTCAGCTGTGGTTTTCCCTGCGCCAAGCCGCTCGCGTGTGGCCGTCATAAATGCATCCGGCCGTGCCACGAGGGCGAGTGTCCACAGCAGCCTGGCGAGCTGTGCCGACAGAGCTGCAGCAAGCCGCGTCTGTTGTGCGGCCACAAGTGTGCCGCTGTCTGCCACGATGGCGTCTGCCCCGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAACTTGCCCGGGAGCACAGTCGCATTGCCACTGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAAATACTCGCACCcaccaaaatcaacaaatccaataaaacTTTGGACTGCAATGAAGAGTGTCGTCTGCTTGAGCGCAATCGCCGCTTGGCCATTGGACTGCAGTCTCGGAATCCGGAGTCGCAGCTCAAGTCGCTGACGAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGCGCTAACCAAGAGCGTCTACGAAACGCTCAGCGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCGCGCAGTCACTCGTTCCCCACGATGAATCGCGAGAAGCGTCAAATGGTGCACGAGCTGTGCGAAGTGTTCGGCGTGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGCAACGTGGTCGCCACCGCGCACAAGGAGCGCtgCTGGTTGCCCGCCACTAGCGTCATGGAGGTCCTGGCCCGCGAGTCCGGCCAGCGTCGCGTCCCGGTGCCCAGCAACAATGCCTGGGGCCTCAAGAAGTAG
- Protein Sequence
- MAEYWQQQQQPPPTQQQQLTNGAAATNESVAAASNAAAASVAACNGQSNNNNNYVNFNQFITQHNLHSSNLGCSSGGGSSGGAFGLTPASCSGSTANNSSSFGVGQYAAPVFGYQNGDGAGQHYPNLYSAFGNNPFAAPAAGGTAFDFSASKLQATAPEFVPNFAKLSLTTSKANSSSTNGNNNINSNNSNTATTQHTPHEAASSNAQRGLAKPLAGGNNTRQQQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYSRAADELDTSNSNDSAQPSPEKQPEKQLPHQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPRDYLCFCGKLKNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRGCGCGRTSKMMQCAMKQQLQCEAACDKPLNCAEHRCQQLCHAGKCEPCAEQVEQHCHCGKQQREVLCTKESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGSCRPCKLSPQQITSCPCGKLAVPPTQRNSCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSSRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPTCKRPCSRTHGCEHVPQHTCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGFPCAKPLACGRHKCIRPCHEGECPQQPGELCRQSCSKPRLLCGHKCAAVCHDGVCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKINKSNKTLDCNEECRLLERNRRLAIGLQSRNPESQLKSLTKYSEFLRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00496269;
- 90% Identity
- iTF_00607498;
- 80% Identity
- -