Basic Information

Insect: Drosophila micromelanica
Gene Symbol: stc
Assembly: GCA_004143905.1
Location: SCDX01001168.1:9049-14307[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.5e+04 -4.2 1.6 15 19 436 440 435 440 0.81

2 14 0.059 4.5e+02 0.8 2.0 4 11 469 476 468 477 0.90

3 14 3.9e-06 0.03 14.1 12.7 4 19 483 498 481 498 0.91

4 14 2 1.5e+04 -4.3 1.4 6 10 524 528 523 528 0.87

5 14 1.3e-08 0.0001 22.0 14.3 1 18 534 551 534 552 0.98

6 14 2 1.5e+04 -4.6 1.5 9 13 558 562 557 563 0.71

7 14 1.4e-07 0.0011 18.8 10.9 1 19 592 610 592 610 0.98

8 14 2.5e-05 0.19 11.6 17.0 4 19 658 673 651 673 0.88

9 14 0.074 5.7e+02 0.5 11.9 1 11 713 723 713 735 0.79

10 14 2.9e-10 2.3e-06 27.3 15.1 1 18 740 757 740 758 0.97

11 14 2 1.5e+04 -4.4 1.2 6 10 787 791 787 791 0.88

12 14 2 1.5e+04 -6.9 9.0 10 18 805 814 795 815 0.77

13 14 8e-09 6.1e-05 22.7 11.4 1 16 851 866 851 873 0.87

14 14 9.5e-08 0.00073 19.3 13.0 1 19 883 902 883 902 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.5e+04	-4.2	1.6	15	19	436	440	435	440	0.81
2	14	0.059	4.5e+02	0.8	2.0	4	11	469	476	468	477	0.90
3	14	3.9e-06	0.03	14.1	12.7	4	19	483	498	481	498	0.91
4	14	2	1.5e+04	-4.3	1.4	6	10	524	528	523	528	0.87
5	14	1.3e-08	0.0001	22.0	14.3	1	18	534	551	534	552	0.98
6	14	2	1.5e+04	-4.6	1.5	9	13	558	562	557	563	0.71
7	14	1.4e-07	0.0011	18.8	10.9	1	19	592	610	592	610	0.98
8	14	2.5e-05	0.19	11.6	17.0	4	19	658	673	651	673	0.88
9	14	0.074	5.7e+02	0.5	11.9	1	11	713	723	713	735	0.79
10	14	2.9e-10	2.3e-06	27.3	15.1	1	18	740	757	740	758	0.97
11	14	2	1.5e+04	-4.4	1.2	6	10	787	791	787	791	0.88
12	14	2	1.5e+04	-6.9	9.0	10	18	805	814	795	815	0.77
13	14	8e-09	6.1e-05	22.7	11.4	1	16	851	866	851	873	0.87
14	14	9.5e-08	0.00073	19.3	13.0	1	19	883	902	883	902	0.96

Sequence Information

Coding Sequence: ATGGAAGCAGATGAGGCGCTCAAACAGATTATCTACTATCCGCCATATGGCCCGTTCTATGGCATTATGGGCGTGATCTCGGCCATAGTCTTCTCATCGATTGGCGCCGCTTACGGGACAGCTGTTGCGGGCACGTCAATAGCGCGGACGGCGGTTTTGCGACCGGAACTGATCATGAAGTCGATCATACCCGTTGTCATGGCGGGCATCATTGCCATCTATGGACTGGTTGTGTCCGTGCTAATTGCGGGTCTGCTGAACTCGGCCGAAACCTATCCAGTGGCCAAGGGATATATCCATCTAGCGGCCGGCTTATCGGTGGGCATGACTGGACTGGCCTCGGGATATGCGATTGGCAATGTGGGCGAAGTGGGCGTGCGGTGCACGGCACAAGAGCCTCGACTGTTTGTTGGAATGATATTGATTCTGATATTCGCCGAAGTGCTGGGATTcaacaactttggcAACGGCAGCGTTTGTGCGCCAGCTTTTTATGCCCATCAAAATGGCCACAGTGGCAACAGTTATGCGCAGCTGTATTCGCCCTTTGGCCACAATCcgtttgccgctgccgccgctggcgTTGGCGGCTACGACTTCAGCGCTTCCAAGCTGCAGGCAACTGCGCCCGAATTTGTGCCCAATTTCGCCAAGCTCAGTCTGACGGCTGCCGTGCAGGTAGAGCCAGAGCCGGCGTCGGTCAGCAAAGCgtcgagcaacaacagcaacaacaacagcagcaacagcaacaacaacactgccACACAGCCCAGCGAGGCAGCCGCCAGCAATGctaaccagcagcagcagcagcagcaacagcagcgtgtGAAGCCGCATGGCAGCGGTAACAAcagccgccagcagcagcgacgcaacGATTATCGGGAGGAGCGCAACGAGGAGCGGTACGAGCGCGGCAAGAAGCCGCAGAAGCAACAGCGCTACGACAATCATCGCAGCAACAAGCGACGCGACGACTGGAATCGCAATCGGGATCGGATCAATGGCTATTCGCGGGCCGCCGACGAGCTGGAcacgagcaacagcaacgagagCGCACAGCCCTCGCCGGAGAAGCAGCCGCAACCAATCTCGCCGCGACGGGCGCCCGAGCACGAGAAGCTGTCGCAGCGCGAGAAGCTGATGCGCGACATTGAGCAGCGGCGACTCGAGTGCCTGGTGTGCGTCGAGCAGATCAAGGCGCATCACGGCACCTGGTCGTGCCAGAACTGCTACCATGTGCTCCACCTCAAGTGCACCATCACGTGGGCGAGCAGCTCCAAGTCGGCGGAGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGAGGTGCCGCGCGAGTATTTGTGCTTCTGCGGCAAACTGAAGAATCCGCCGCTGACGCGCAACGAGCTGGCCCACAGCTGCGGCGAGCTTTGCTGCCGTGTCGAGGGCTGTGCGCACGCGTGCACGCTCCTCTGCCATCCGGGGCCGTGTCCGGCGTGCCAGGCGAACGTGAGTcgcagctgcggctgcggccgCACCTCGAAGCTGATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGCGAGGCCACCTGCGACAAGCTGCTCAACTGCGGCGAGCATCGCTGCCAGCAGCGCTGCCATGCGGGCAAGTGCGAGCCGTGCGCGGAGCAGGTGCCGCAGCGCTGCCACTGCGGCAAGCAGCAGCGGGAGGTGCTCTGCACGCGCGAGAGCCAGGACAAGCGCAGCTATTCGTGCAAGGAGTGCTGCGGCAAGCCGCTGCCCTGCGGCAATCACAAGTGCAAGGACTCGTGCCACGCGGCCGCCTGCCGCCCCTGCAAGCTGAGTCCCGCCCAGATCACCAGCTGCCCCTGCGGCAAGATGGCCGTGCCGGCCGCACAGCGCACCAGCTGCCTGGACCCGGTGCCCACCTGTGACGGCGTCTGCGGCAAGACGCTGCGCTGCGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAGTGCCATCTGGGCCAGTGTCCGCCGTGTCCCAAACAGACGGCGGTCAAGTGCCGTTGCGGCCACATGGATCAGCTGATCAAGTGCCGGCAGCTGTCAACGCGGGCGGACGATGCCCGCTGCAAGCGCCGCTGCACCAAGAAGCGCAGCTGCGGCAAGCACAAATGCAACGCCGAGTGCTGCATCGATATCGATCATGCGTGTCCGCTGCCCTGCAACCGGACCCTCAGCTGCGGCCGGCACAAGTGCGACCAGCCCTGCCATCGGGGCAACTGTCCGCCGTGCTACCGCAGCAGCTTCGAGGAACTGTACTGCGAGTGCGGCGCCGAGGTCATCTATCCGCCGGTGCCCTGCGGCACCAAGAAGCCGATCTGCAAGCGACCCTGCTCGCGCACCCACGGCTGCGAGCACGCGCCCCAGCACAACTGCCATGCGCTGGCCAGCTGCCCGCCGTGCATGATGTTCACCACGAAATGGTGCCACGGCAACCACGAGCAGCGCAAGACGATACCCTGCTCCCAGGCCAGCTTCAGCTGTGGCCTGGCCTGCGGCCGGCCTCTCGCCTGCGGGCGCCATAAGTGCATCCGGCCCTGCCACGAGGGCGACTGCCAGCAGGCGGGCGAGGTGTGCCGCCAGAGCTGCACCAAGCCGCGACTGCTGTGCGGTCACAAGTGTGCGGCCGTCTGCCACGAGGGCGCCTGCCCGGAGACCCCATGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGAAAGCAGAGCCGCAGCTGCCAGGAGCTCGCCCGAGAGCATAGTCGCATCGCCACCGCCCAGCTCGCCTCCTCAATGGCGGAGATGTCGCGCGGCAACTACATGGAACTCAGCGAGATCCTCGCgcccaacaaaaacaacaagtccAACAAAACcTTGGATTGCAACGAGGAATGTCGTCTGTTGGAGCGTAATCGTCGCTTGGCCATTGGGCTGCAGTCACGGAATTCGGACTCGCAGCTCAAGTTGCTCACCAAGTACTCGGAATTCTTGCGGGGCTTTGCCAAGCGCAATCCGGCGCTCACGAAGAGCGTCTATGAGACGCTCACCGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAGAAGTCGCGAAGTCACTCGTTTCCCACCATGAACCGCGAGAAGCGGCAGCTGGTGCACGAACTGTGCGAAGTTTTTGGCGTGGAGTCCGTCTCTTACGACAAGGAGCCCAATCGCAATGTGGTGGCCACGGCGCACAAGGAACGCTGTTGGCTTCCTGCCACTAGCATTATGGAGGTGCTGGCCCGCGAATCGGGACAACGACGCGTTCCCGTGCCGAGCAATAATGCATGGGGCCTCAAAAAGTAG
Protein Sequence: MEADEALKQIIYYPPYGPFYGIMGVISAIVFSSIGAAYGTAVAGTSIARTAVLRPELIMKSIIPVVMAGIIAIYGLVVSVLIAGLLNSAETYPVAKGYIHLAAGLSVGMTGLASGYAIGNVGEVGVRCTAQEPRLFVGMILILIFAEVLGFNNFGNGSVCAPAFYAHQNGHSGNSYAQLYSPFGHNPFAAAAAGVGGYDFSASKLQATAPEFVPNFAKLSLTAAVQVEPEPASVSKASSNNSNNNSSNSNNNTATQPSEAAASNANQQQQQQQQQRVKPHGSGNNSRQQQRRNDYREERNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYSRAADELDTSNSNESAQPSPEKQPQPISPRRAPEHEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQEVPREYLCFCGKLKNPPLTRNELAHSCGELCCRVEGCAHACTLLCHPGPCPACQANVSRSCGCGRTSKLMQCAMKQPLQCEATCDKLLNCGEHRCQQRCHAGKCEPCAEQVPQRCHCGKQQREVLCTRESQDKRSYSCKECCGKPLPCGNHKCKDSCHAAACRPCKLSPAQITSCPCGKMAVPAAQRTSCLDPVPTCDGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHAPQHNCHALASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGRPLACGRHKCIRPCHEGDCQQAGEVCRQSCTKPRLLCGHKCAAVCHEGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNSDSQLKLLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00496269;
90% Identity: iTF_00561425;
80% Identity: -