Dmel010128.1
Basic Information
- Insect
- Drosophila melanosoma
- Gene Symbol
- stc
- Assembly
- GCA_035042045.1
- Location
- JAWNLY010000177.1:1969857-1974136[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.4 1.2e+04 -3.6 0.5 15 18 349 352 348 353 0.79 2 14 2 1.7e+04 -4.1 1.6 15 19 376 380 375 380 0.81 3 14 0.015 1.2e+02 2.7 2.5 4 11 409 416 408 417 0.91 4 14 5.8e-07 0.0049 16.8 15.1 1 19 421 438 421 438 0.93 5 14 2.2e-08 0.00019 21.3 10.9 1 18 474 491 474 492 0.96 6 14 2 1.7e+04 -6.2 3.9 7 13 496 502 496 503 0.74 7 14 2e-09 1.7e-05 24.7 12.9 1 19 532 550 532 550 0.98 8 14 3.3e-05 0.28 11.2 16.3 4 19 598 613 591 613 0.87 9 14 0.057 4.8e+02 0.8 11.6 1 11 653 663 653 675 0.79 10 14 4.7e-10 4e-06 26.7 15.5 1 18 680 697 680 698 0.97 11 14 1.4 1.2e+04 -3.6 1.5 6 10 727 731 726 732 0.61 12 14 2 1.7e+04 -7.7 9.7 10 18 745 754 734 755 0.76 13 14 1.2e-08 0.0001 22.2 11.4 1 16 791 806 791 809 0.96 14 14 8.1e-08 0.00068 19.5 13.0 1 19 824 843 824 843 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAAtattggcaacagcagcaacaacaacagccgccgccatcgcagcaacagcagttaaCAAATGGAGTAGCAGCTCATAATGACTCAGTCGACGCTGCTTCTATCGCAGCCGGTACCTCTGGCGCTGCCTGCAACGggcagagcaacaacaacaacaactatgtTAACTTCAATCAGTTCATCTCGCAGCATAATTTACACAGCTCCAATCTTGGGTatagcagcggcggcggcggtggcggtgcaTTCGGCCTGACGCCGGCCAGCTGCAGCGGTAGCGCTGCCAACAACTCCTCCAGCTTCGGCGTCGGCCAATATGCGGCACCTAGTTTTGGCTATCAAAATGGCGATGGGGCTGGCCAACATAATCCTAATTTGTACTCCACCTTTGGCAATAACCCATTTGCTGCACCTGCTGCCGGTGGAGCTGCTTTCAATTTTAGCACTTCCAAGCTGCAGGCAACGGCACCCGAATTTGTGCCCAGCTTTGCCAAGCTCAGCCTATCGACGAGCAAAgccaacagtagcagcagcaacaatagcaataataacaataatagcaacaacagcaacactgcCACAACCCAGCACACGCCACATGAGGCTGCCAGCAGCCATGCTCAACGAGGCTTGACGAAGCCGCTCGCTGGCAGCAACAATACTCGCCAGCAACAGCGACGCCAGGACTATCGCGAGGATCGCCATGAGGATCGGTATGAACGTGGCAAAAAgccgcagaagcagcagcgctACGACAATCATCGCAGCAACAAAAGACGCGACGACTGGAATCGCAATCGTGATCGCATCAACGGCTATCCGCGAGCCGCCGACGAACtggacaacagcaacgacagcgGCCAGCCCTCGCCTGAGAAGCAGCCcgaaaaacaactgcaacaccaAGTCTCCCCTCGCCGTGCACCCGACAATGAGAAGCTATCGCAGCGGGAGAAGCTAATGCGCGACATTGAGCAGCGGAGACTGGAGTGCTTGGTGTGCGTGGAGCAGATCAAGGCGCATCATGGCACGTGGTCGTGCCAGAACTGCTATCATGTGCTGCATCTCAAATGCACCATCACCTGGGCGAGCAGTTCCAAGTCGGCGGAGGGCTGGCGTTGTCCAGCCTGCCAAAATGTGCTACAAGAGGTGCCGCGCGAGTATCTCTGCTTCTGTGGCAAGCTAAGGAATCCGCCACTCACACGCAACGAGCTGGCGCACACTTGCGGCGAACTCTGCTGCCGCGTCGAGGGCTGCAGTCATGCGTGCACCCTGCTCTGTCATCCGGGTCCGTGTCCGCCGTGCCAGGCGAACGTGTTGCGCAGCTGTGGCTGCGGACGCACCTCCAAGCTAATGCAGTGCGCCAttaagcagcagttgcagtgcGAGGCCGCTTGCGACAAGCCACTCAATTGCGCCGAGCATCGTTGCGAGCAGCTGTGCCATGCGGGAAAATGTGAGCCGTGTGTGGAGCAGGTGGAGCAACACTGTCACTGTGGTAAGCAGCAGCGCGAGGTGCTATGCACCAAGGAGAGTCAGGACAAGCGCAGCTACTCGTGCAAGGAGTGCTGTGGCAAGCCGTTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGTCACGCCGGCGCATGTCGTCCCTGCAAGCTGAGTCCGCAGCAGATCACTAGTTGCCCCTGTGGCAAGTTGGCTGTGCCTCCGACGCAGCGTAGCAGCTGCCTGGATCCGGTGCCTACGTGCGAGGGCGCGTGTAGCAAGACGCTGCGCTGTGGCAAGCCGGCGCATCCTCATCAGTGTGCCAGCAAATGCCATTTGGGGCAGTGTCCACCATGCCAAAAGCAGACGGCCGTCAAATGCCGTTGCGGGCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCTACCCGGGCGGACGATGCGCGCTGCAAACGTCGTTGCACGAAGAAACGCAGCTGTGGCAAGCACAAATGCAATGCGGAATGTTGCATCGACATAGATCACGCCTGCCCACTGCCCTGCAACCGGACGCTGAGCTGCGGCAAGCACAAGTGCGATCAGCCCTGCCATCGCGGCAATTGTCCACCCTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGCGAATGCGGCGCCGAAGTGATCTACCCACCGGTGCCGTGTGGCACAAAGCGGCCGCCCTGCAAGCGGCCCTGTTCTCGCACCCACGGCTGCGAGCATGTGCCGCAGCACAATTGCCATGCGGCGACCACCTGTCCGCCCTGCATGATTTTCACCACGAAGTGGTGCCACGGTAATCACGAGCAGCGCAAGACGATACCCTGCTCGCAGGCTAGCTTTAGCTGTGGCTTTCCCTGCGCGAAGCAGCTCGCGTGTGGCCGCCATAAGTGCATCCGGCCGTGCCACGAGGGCGAGTGTCCACAGCAGCCGGGCGAGCTGTGCCGCCAAAACTGCACCAAGCCGCGTCTGCTGTGCGGCCACAAGTGTTCCGCTGTCTGCCACGATGGCGCCTGCCCCGAAACGCCCTGCAAGGAGCTCGTCGAAGTGCAGTGCGAGTGCGGCAATCGCAAACAGAACCGCAGCTGCCAGGAGCTTGCCCGGGAGCACAGTCGCATTGCCACTGCCCAACTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAAATACTCGCAcccaccaaaaacaacaaatccaATAAAACCTTGGACTGCAATGAGGAGTGTCGTCTGTTGGAGCGCAATCGCCGCTTGGCCATTGGACTGCAGTCTCGGAATCCGGAGTCGCAGCTCAAGACGCTGACGAAGTACTCGGAATTCATGCGCGGTTTTGCCAAACGCAATCCGGTGCTAACCAAGAGCGTCTACGAAACGCTCAGTGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCACGCAGTCACTCGTTCCCCACGATGAATCGGGAGAAGCGTCAAATGGTGCACGAACTGTGCGAAGTGTTTGGCCTGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGCAACGTGGTCGCCACCGCGCACAAGGAACGCtgCTGGTTGCCCGCCACTAGCGTCATGGAGGTTCTGGCCCGCGAGTCCGGTCTGCGTCGCGTCCCGGTGCCCAGCAACAATGCCTGGGGCCTCAAGAAGTAG
- Protein Sequence
- MAEYWQQQQQQQPPPSQQQQLTNGVAAHNDSVDAASIAAGTSGAACNGQSNNNNNYVNFNQFISQHNLHSSNLGYSSGGGGGGAFGLTPASCSGSAANNSSSFGVGQYAAPSFGYQNGDGAGQHNPNLYSTFGNNPFAAPAAGGAAFNFSTSKLQATAPEFVPSFAKLSLSTSKANSSSSNNSNNNNNSNNSNTATTQHTPHEAASSHAQRGLTKPLAGSNNTRQQQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDNSNDSGQPSPEKQPEKQLQHQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQEVPREYLCFCGKLRNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRSCGCGRTSKLMQCAIKQQLQCEAACDKPLNCAEHRCEQLCHAGKCEPCVEQVEQHCHCGKQQREVLCTKESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLAVPPTQRSSCLDPVPTCEGACSKTLRCGKPAHPHQCASKCHLGQCPPCQKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHVPQHNCHAATTCPPCMIFTTKWCHGNHEQRKTIPCSQASFSCGFPCAKQLACGRHKCIRPCHEGECPQQPGELCRQNCTKPRLLCGHKCSAVCHDGACPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPESQLKTLTKYSEFMRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGLESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGLRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00496269;
- 90% Identity
- iTF_00607498;
- 80% Identity
- -