Dcra007485.1
Basic Information
- Insect
- Drosophila cracens
- Gene Symbol
- stc
- Assembly
- GCA_035042505.1
- Location
- JAWNLF010000631.1:8332278-8336011[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1.3e+04 -3.6 0.5 15 18 354 357 353 358 0.79 2 15 2 1.8e+04 -4.1 1.6 15 19 381 385 380 385 0.81 3 15 0.015 1.3e+02 2.7 2.5 4 11 414 421 413 422 0.91 4 15 5.8e-07 0.0052 16.8 15.1 1 19 426 443 426 443 0.93 5 15 2.4e-08 0.00021 21.2 11.4 1 18 479 496 479 497 0.96 6 15 2 1.8e+04 -6.3 3.9 7 13 501 507 501 508 0.74 7 15 3.4e-09 3e-05 23.9 13.6 1 19 537 555 537 555 0.98 8 15 1.1 9.9e+03 -3.3 0.5 5 10 585 590 585 590 0.90 9 15 2.4e-05 0.21 11.6 17.0 4 19 603 618 596 618 0.88 10 15 0.057 5.1e+02 0.8 11.6 1 11 658 668 658 680 0.79 11 15 4.7e-10 4.2e-06 26.7 15.5 1 18 685 702 685 703 0.97 12 15 0.3 2.7e+03 -1.5 0.8 5 10 731 736 729 736 0.94 13 15 2 1.8e+04 -5.5 10.2 7 18 747 759 740 760 0.83 14 15 2.7e-08 0.00024 21.0 12.6 1 16 796 811 796 819 0.95 15 15 4.7e-07 0.0042 17.1 12.4 1 19 829 848 829 848 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAAtattggcaacagcagcagcagccgccgccaacgcagcaacagcagctaacaAATGGAGCAGCAGCTACTAATGAATCAGTCGCTGCTGCCTCCaacgctgccgctgcctccGTTGCTGCTTGCAATGggcagagcaacaacaacaacaattatgttAACTTCAATCAGTTCATTACGCAGCATAATTTACACAGCTCCAATCTCGGCTATAGcagtggcggcggcagcagtggcggcggcagcagtggCGGCGCCTTTGGCCTAACGCCCGCCAGTTGCAGCGGCAGCACAGCCAACAACTCCTCCAACTTTGGCGTCGGCCAATATGCGGCGCCTGTTTTTGGCTATCAGAATGGCGATGGCGCTGGCCAACATTATCCCAATTTGTACTCAGCCTTTGGCAATAATCCatttgctgctcctgctgccggCGGCACCGCTTTCGATTTTAGCGCTTCCAAGCTGCAGGCAACGGCGCCCGAATTTGTGCCCAACTTCGCCAAGCTCAGCCTGACGACGAGcaaagccaacagcagcagcaccaatggcaataataatattaatagcaacaacagcaacactgcCACAACACAGCACACGCCACATgaggcagccagcagcaatgcTCAACGGGGCTTAGCGAAGCCTCTGGCTGGCGGCAATAAtacgcggcagcagcagcggcgccagGACTATCGCGAGGATCGCCATGAGGATCGCTATGAGCGTGGCAAGAAGccgcagaagcagcagcgctACGACAATCATCGCAGCAACAAAAGACGAGACGACTGGAATCGCAATCGTGACCGCATCAATGGCTATTCACGCGCCGCCGACGAACTGGacaccagcaacagtaacGACAGCGCCCAGCCCTCGCCCGAGAAGCAGCCCGAGAAGCAGCTGCCACACCAAGTCTCCCCTCGCCGTGCGCCCGACAACGAGAAGCTGTCGCAGCGGGAGAAGCTGATGCGCGACATCGAGCAGCGACGCCTGGAGTGCTTGGTGTGCGTCGAGCAGATCAAGGCGCATCATGGCACGTGGTCGTGCCAGAACTGCTATCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCGAGCAGTTCCAAGTCGGCGGAGGGCTGGCGCTGCCCAGCCTGCCAGAATGTGCTGCAAGAGTTGCCGCGCGATTATCTCTGCTTCTGTGGCAAGCTAAAGAATCCGCCGCTCACACGCAACGAGCTGGCGCACACTTGCGGCGAACTTTGCTGCCGCGTTGAGGGCTGCAGTCATGCGTGCACCCTGCTTTGTCATCCGGGTCCGTGTCCGCCGTGCCAGGCAAACGTGTTGCGCGGCTGTGGCTGCGGACGCACCTCCAAGATGATGCAGTGCGCCatgaagcagcaactgcagtgCGAGGCCGCCTGCGACAAGCCACTCAATTGCGCCGAGCATCGTTGCCAGCAGTTGTGCCATGCGGGCAAATGTGAGCCGTGTGCGGAGCAGGTGGAGCAACACTGCCactgtggcaagcagcagcgcGAGGTGCTCTGCACCAAGGAGAGTCAGGACAAGCGCAGCTACTCGTGCAAGGAGTGTTGTGGCAAACCGTTGCCCTGCGGAAATCACAAGTGCAAGGATTCGTGCCACGCCGGCTCCTGTCGTCCCTGCAAGTTGAGTCCGCAGCAGATCACCAGCTGCCCCTGTGGCAAATTGGCTGTGCCTCCGACGCAGCGCAACAGCTGCCTTGATCCGGTGCCGACGTGCGAGGGCGTGTGTGGCAAGACGCTGCGCTGCGGCAAACCGGCGCATCCGCATCAGTGCGCCAGCAAATGCCATTTGGGGCAGTGTCCGCCGTGCCCCAAACAGACGGCCGTCAAATGCCGTTGCGGTCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCGAGCCGGGCGGACGATGCGCGCTGCAAGCGCCGTTGCACGAAGAAACGCAGCTGTGGCAAGCACAAATGCAACGCGGAGTGTTGCATCGACATCGACCATGCCTGCCCGCTGCCCTGCAACCGAACGCTGAGCTGCGGCAAACACAAGTGCGATCAGCCCTGCCATCGCGGCAATTGTCCGCCCTGCTATCGCAGTAGCTTCGAGGAGCTCTACTGCGAGTGCGGCGCCGAAGTGATCTACCCACCGGTGCCGTGTGGCACAAAGCGGCCGACCTGCAAGCGGCCCTGTTCGCGTACCCACGGCTGTGAGCATGTGCCGCAGCACACTTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTTACCACGAAGTGGTGCCACGGCAATCACGAGCAGCGCAAGACGATACCCTGCTCGCAGGCCAGCTTCAGCTGTGGGTTTCCCTGCGCCAAGCCGCTCGCGTGTGGCCGTCATAAATGCATCCGGCCGTGCCACGAGGGTGAGTGTCCACAGCAGCCTGGCGAGCTGTGCCGCCAGAGCTGCAGCAAGCCGCGTCTGTTGTGCGGCCACAAGTGTGCCGCTGTCTGCCACGATGGCGTCTGCCCCGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAACTTGCCCGGGAGCACAGTCGCATTGCCACTGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAAATACTCGCACCcaccaaaatcaacaaatccaataaaacTTTGGACTGCAATGAGGAGTGTCGTCTGCTGGAGCGCAATCGCCGCTTGGCCATTGGACTGCAGTCTCGGAATCCGGAGTCGCAGCTCAAGTCGCTGACGAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGCGCTAACCAAAAGCGTCTACGAAACGCTCAGCGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCGCGCAGTCACTCGTTCCCCACGATGAATCGCGAGAAGCGTCAAATGGTGCACGAGCTGTGCGAAGTGTTCGGCGTGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGCAACGTGGTCGCCACCGCGCACAAGGAGCGCTGCTGGTTGCCCGCCACTAGCGTCATGGAGGTCCTGGCCCGCGAGTCCGGCCAGCGTCGCGTCCCGGTGCCCAGCAACAATGCCTGGGGCCTCAAGAAGTAG
- Protein Sequence
- MAEYWQQQQQPPPTQQQQLTNGAAATNESVAAASNAAAASVAACNGQSNNNNNYVNFNQFITQHNLHSSNLGYSSGGGSSGGGSSGGAFGLTPASCSGSTANNSSNFGVGQYAAPVFGYQNGDGAGQHYPNLYSAFGNNPFAAPAAGGTAFDFSASKLQATAPEFVPNFAKLSLTTSKANSSSTNGNNNINSNNSNTATTQHTPHEAASSNAQRGLAKPLAGGNNTRQQQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYSRAADELDTSNSNDSAQPSPEKQPEKQLPHQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPRDYLCFCGKLKNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRGCGCGRTSKMMQCAMKQQLQCEAACDKPLNCAEHRCQQLCHAGKCEPCAEQVEQHCHCGKQQREVLCTKESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGSCRPCKLSPQQITSCPCGKLAVPPTQRNSCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSSRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPTCKRPCSRTHGCEHVPQHTCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGFPCAKPLACGRHKCIRPCHEGECPQQPGELCRQSCSKPRLLCGHKCAAVCHDGVCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKINKSNKTLDCNEECRLLERNRRLAIGLQSRNPESQLKSLTKYSEFLRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00496269;
- 90% Identity
- iTF_00607498;
- 80% Identity
- -