Dmea004486.1
Basic Information
- Insect
- Drosophila melanica
- Gene Symbol
- stc
- Assembly
- GCA_004143765.1
- Location
- SCDT01000066.1:46089-51140[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1.5e+04 -3.7 0.5 15 18 361 364 360 365 0.79 2 15 2 2e+04 -4.1 1.6 15 19 388 392 387 392 0.81 3 15 0.056 5.7e+02 0.8 2.0 4 11 421 428 420 429 0.90 4 15 3.7e-06 0.038 14.2 12.7 4 19 435 450 433 450 0.91 5 15 2 2e+04 -4.2 1.4 6 10 476 480 475 480 0.87 6 15 1.3e-08 0.00013 22.1 14.3 1 18 486 503 486 504 0.98 7 15 1.8 1.8e+04 -4.0 1.4 8 13 509 514 508 515 0.74 8 15 1.3e-07 0.0013 18.8 10.9 1 19 544 562 544 562 0.98 9 15 2.4e-05 0.24 11.6 17.0 4 19 610 625 603 625 0.88 10 15 0.061 6.2e+02 0.7 11.7 1 11 665 675 665 687 0.79 11 15 2.8e-10 2.8e-06 27.4 15.1 1 18 692 709 692 710 0.97 12 15 2 2e+04 -4.4 1.2 6 10 739 743 739 743 0.88 13 15 2 2e+04 -6.9 9.0 10 18 757 766 747 767 0.77 14 15 7.6e-09 7.7e-05 22.8 11.4 1 16 803 818 803 825 0.87 15 15 9e-08 0.00092 19.4 13.0 1 19 835 854 835 854 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAgtattggcagcagcagcagcagcagcaacgacaacaccaacaacagcaccaacaacaacaacaccagcagcagcagccgcagttaACCAATGGCTCTGAGTCAGTCAAcggccaaaacaacaacaataactatgTAAACTTTAACCAATTTATCACACAACACAATTTGGCCAGCGCAAGCCTCGGCTACGGCTTTGGCGGTGGAGGCGGCGGCGCCTTTGGCCTGAcgaccaacagcagcaacaacggcagcaacggaAGCATCGGCGTCGGCACCAGCGGTGACGgaagcgccagcagcaacagcaacaactttggcGGTGGCAGCTTATGTGCGCCAGCTTTTTATGCCCATCAAAATGGCCACAGTGGCAACAGTTATACGCAGCTGTATTCGCCCTTTGGTCACAATCcgtttgccgctgccgccgctggcgTTGGCGGCTACGATTTCAGCGCTTCCAAGCTGCAGGCAACAGCGCCCGAATTTGTGCCCAATTTTGCCAAGCTCAGTTTAACAGCTGCCATGCAGGAGGAGCCAGAGCCGTCGTCGGCCAGCAAATCGtcgggcaacaacaatatcaacaacagcaacaacaataacagcaacaacaacactgccACACAGCCCAGCgaggcagccagcagcaatgccaaccagcagcaaccgcagcgtATGAAGCCGcatggcagcggcaacaacagtcgccagcagcagcgacgcaacGATTATCGGGAGGAGCGCAGCGAGGAGCGGTACGAGCGCGGAAAGAAGCCGCAGAAGCAAAAGCGCTACGACAATCATCGCAGCAACAAGCGACGCGACGACTGGAATCGCAATCGGGATCGGATCAATGGCTATTCGCGGGCCGCCGATGATCTGGAcacgagcaacagcaacgacagcgCACAGCCGTCACCGGAGAAGCAGACACAACAAATCTCGCCGCGACGGGCGCCCGAACACGAGAAGCTGTCGCAGCGGGAGAAGCTGATGCGCGACATTGAGCAGCGTCGACTCGAGTGCCTTGTTTGTGTTGAGCAGATAAAGGCGCATCACGGCACCTGGTCATGCCAGAACTGTTATCATGTGCTCCACCTCAAGTGCACCATCACGTGGGCGAGTAGCTCCAAGTCGGCGGAGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGAGGTGCCGCGCGAATATTTGTGTTTCTGCGGCAAACTGAAGAATCCGCCGCTGACGCGCAACGAACTCGCCCACAGCTGTGGCGAGCTCTGCTGCCGCGTCGAGGGCTGTGCGCATGCGTGCACGCTCCTCTGCCATCCGGGGCCGTGTCCGGCGTGCCAGGCGAACGTGAGtcgcagctgcggctgcggccgCACCTCGAAGCTGATGCAGTGCGCCATGAAACAGCCGCTGCAGTGCGAGGCCACCTGCGAGAAGCTGCTCAACTGCGGCGAGCATCGCTGCCAGCAGCGCTGTCACGCCGGCAAGTGCGAGCCGTGCGCGGAGCAGGTGCCGCAGCGCTGCCACTGCGGCAAGCAGCAGCGGGATGTGCTCTGCACTCGCGAGAGCCAGGACAAGCGCAGCTATTCGTGCAAGGAGTGCTGCGGCAAGCCGCTGCCCTGTGGCAATCACAAGTGCAAGGACTCATGTCACGCGGCCGCGTGCCGCCCTTGCAAGCTGAGTCCCGCCCAGATCACGAGTTGCCCCTGCGGCAAGCTAGCCGTGCCGGCCGCACAGCGCACCAGCTGCCTGGACCCGGTGCCCACCTGTGACGGCGTCTGCGGCAAGACGCTCCGCTGCGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAGTGCCATCTGGGCCAGTGTCCGCCGTGTCCCAAGCAGACGGCGGTCAAGTGCCGTTGCGGTCACATGGATCAGCTGATCAAGTGCCGGCAGCTGTCGACGCGGGCGGACGATGCGCGCTGCAAGCGTCGCTGCACCAAGAAGCGCAGCTGCGGCAAACACAAGTGCAACGCCGAATGCTGCATCGATATCGATCATGCGTGTCCGCTACCCTGCAACCGGACGCTCAGCTGTGGCCGGCACAAGTGCGACCAGCCGTGCCATCGGGGCAACTGTCCGCCGTGCTATCGCAGCAGCTTTGAGGAGCTCTACTGCGAGTGCGGAGCTGAGGTCATCTATCCGCCGGTGCCCTGCGGCACCAAGAAGCCGATCTGCAAGCGACCTTGCTCGCGCACCCACGGCTGCGAGCACGCGCCACAGCACAACTGCCATGCACTGGCCAGCTGCCCGCCGTGCATGATGTTCACCACGAAATGGTGCCACGGCAACCACGAGCAGCGCAAGACGATACCCTGCTCCCAGGCCAGCTTCAGCTGTGGCTTGGCCTGTGGTCGGCCGCTCGCCTGTGGGCGCCACAAGTGCATCCGGCCCTGTCACGAGGGCGACTGCCAGCAGGCGGGCGAGGTGTGTCGCCAGAGCTGCACCAAGCCCCGACTGCTGTGCGGTCACAAGTGTGCGGCCGTCTGCCACGAGGGCGCCTGCCCGGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGGAAGCAGAACCGCAGCTGTCAGGAACTCGCCCGGGAGCACAGTCGCATCGCCACCGCCCAGCTCGCCTCATCCATGGCGGAGATGTCGCGCGGCAACTACATGGAACTCAGCGAGATCCTCGCGccgaacaagaacaacaagtcCAACAAAACATTGGACTGCAACGAGGAATGTCGTCTGTTGGAGCGTAATCGTCGCTTGGCCATTGGACTGCAGTCACGGAATTCGGAAGCGCAGCTTAAGTTGCTGACCAAGTACTCGGAGTTCTTGCGGGGCTTTGCCAAGCGCAATCCGGCGCTCACCAAGAGCGTCTATGAAACGCTGACCGATCTGGTCAAGCTGGCCAAGGAGAGTAAACAGAAGTCGCGAAGTCACTCGTTTCCAACCATGAATCGCGAGAAGCGACAGCTGGTGCACGAACTGTGCGAAGTTTTTGGCGTAGAGTCCGTCTCCTACGACAAGGAGCCCAATCGCAATGTGGTGGCCACGGCGCACAAGGAACGCTGTTGGCTTCCTGCCACTAGCATTATGGAGGTGCTAGCACGCGAATCTGGGCAACGGCGCGTTCCCGTTCCGAGCAACAATGCATGGGGCCTCAAAAAGTAG
- Protein Sequence
- MAEYWQQQQQQQRQHQQQHQQQQHQQQQPQLTNGSESVNGQNNNNNYVNFNQFITQHNLASASLGYGFGGGGGGAFGLTTNSSNNGSNGSIGVGTSGDGSASSNSNNFGGGSLCAPAFYAHQNGHSGNSYTQLYSPFGHNPFAAAAAGVGGYDFSASKLQATAPEFVPNFAKLSLTAAMQEEPEPSSASKSSGNNNINNSNNNNSNNNTATQPSEAASSNANQQQPQRMKPHGSGNNSRQQQRRNDYREERSEERYERGKKPQKQKRYDNHRSNKRRDDWNRNRDRINGYSRAADDLDTSNSNDSAQPSPEKQTQQISPRRAPEHEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQEVPREYLCFCGKLKNPPLTRNELAHSCGELCCRVEGCAHACTLLCHPGPCPACQANVSRSCGCGRTSKLMQCAMKQPLQCEATCEKLLNCGEHRCQQRCHAGKCEPCAEQVPQRCHCGKQQRDVLCTRESQDKRSYSCKECCGKPLPCGNHKCKDSCHAAACRPCKLSPAQITSCPCGKLAVPAAQRTSCLDPVPTCDGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHAPQHNCHALASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGRPLACGRHKCIRPCHEGDCQQAGEVCRQSCTKPRLLCGHKCAAVCHEGACPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNSEAQLKLLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00496269;
- 90% Identity
- iTF_00561425;
- 80% Identity
- -