Basic Information

Insect: Drosophila sordidula
Gene Symbol: stc
Assembly: GCA_035047465.1
Location: JAWNPQ010000013.1:5339292-5343983[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4 1.2e+04 -3.6 0.5 15 18 349 352 348 353 0.79

2 16 2 1.7e+04 -4.1 1.6 15 19 376 380 375 380 0.81

3 16 0.056 4.7e+02 0.9 2.0 4 11 409 416 408 417 0.90

4 16 3.7e-06 0.031 14.2 12.7 4 19 423 438 421 438 0.91

5 16 1.3e-08 0.00011 22.1 14.3 1 18 474 491 474 492 0.98

6 16 1.8 1.5e+04 -3.9 1.4 8 13 497 502 496 503 0.74

7 16 1.3e-07 0.0011 18.8 10.9 1 19 532 550 532 550 0.98

8 16 1.1 9.4e+03 -3.3 0.5 5 10 580 585 580 585 0.90

9 16 2.3e-05 0.2 11.6 17.0 4 19 598 613 591 613 0.88

10 16 0.057 4.8e+02 0.8 11.6 1 11 653 663 653 675 0.79

11 16 2.8e-10 2.3e-06 27.4 15.1 1 18 680 697 680 698 0.97

12 16 2 1.7e+04 -4.3 1.2 6 10 727 731 727 731 0.88

13 16 2 1.7e+04 -6.7 9.7 10 18 745 754 735 755 0.80

14 16 2 1.7e+04 -4.5 1.5 10 13 762 765 760 766 0.80

15 16 2.4e-08 0.0002 21.2 12.0 1 16 791 806 791 817 0.95

16 16 5e-07 0.0043 17.0 12.7 1 19 824 843 824 843 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4	1.2e+04	-3.6	0.5	15	18	349	352	348	353	0.79
2	16	2	1.7e+04	-4.1	1.6	15	19	376	380	375	380	0.81
3	16	0.056	4.7e+02	0.9	2.0	4	11	409	416	408	417	0.90
4	16	3.7e-06	0.031	14.2	12.7	4	19	423	438	421	438	0.91
5	16	1.3e-08	0.00011	22.1	14.3	1	18	474	491	474	492	0.98
6	16	1.8	1.5e+04	-3.9	1.4	8	13	497	502	496	503	0.74
7	16	1.3e-07	0.0011	18.8	10.9	1	19	532	550	532	550	0.98
8	16	1.1	9.4e+03	-3.3	0.5	5	10	580	585	580	585	0.90
9	16	2.3e-05	0.2	11.6	17.0	4	19	598	613	591	613	0.88
10	16	0.057	4.8e+02	0.8	11.6	1	11	653	663	653	675	0.79
11	16	2.8e-10	2.3e-06	27.4	15.1	1	18	680	697	680	698	0.97
12	16	2	1.7e+04	-4.3	1.2	6	10	727	731	727	731	0.88
13	16	2	1.7e+04	-6.7	9.7	10	18	745	754	735	755	0.80
14	16	2	1.7e+04	-4.5	1.5	10	13	762	765	760	766	0.80
15	16	2.4e-08	0.0002	21.2	12.0	1	16	791	806	791	817	0.95
16	16	5e-07	0.0043	17.0	12.7	1	19	824	843	824	843	0.96

Sequence Information

Coding Sequence: ATGGCCGAGTattggcggcagcagcagcagcagcaactacaacagcagcagcagcagcagcagcagctgctccagcagcagccgcagttaACCAACGGCGCTGAGTCAGCCAacgggcacaacaacaacaataactatgtgaatttcaatcaatttatCACACAACACAATTTGGCCAGCGCCAGCCTCGGCTACagcgttggcggcggcggcgccttcGGCCTGacgcccaacagcagcagcggcagcggcgccagcagcaacagcaacagcaacaactttggCGGAGGCAGCTTGTGCGCGCCCGTCTTCTACGCCCACCAAAATGGGCATGGCAGCAGCTACGGGCAGCTGTACACGCCCTTCGGCAACAATCCgtttgccgctgccggcggctACGATTTCAGCGCTTCCAAGCTGCAGGCAACTGCGCCCGAGTTCGTGCCCAACTTTGCCAAGCTCAGCCTGACGGCGGCCGCGCAGGAGGAGCCCGAGTCCGAGCCGGcgtcggcgacggcggcggcggcggcggcggcgtcgatCAGCAAGAgtcagagcaacaacagcaacaacaacactgccACACAGCCGGgcgaggcggcggcggccagccaGCAGCGAGTCGAGCAGCGGCCGCCGAACAACagtcgccagcagcagcgacgcaaCGACTACCGCGAGGAGCGCAACGAGGAGCGCTACGAGCGCGGCAAGAAGccgcagaagcagcagcgctACGACAATCATCGGAGCAACAAGCGGCGCGACGACTGGAACCGCAATCGGGACCGCATCAACGGCTACAACCGCGCCGCCGACGAGCTGGAcacgagcaacagcaacgacagcgCCCAGCCGTCGCcggagaagcagcagcagcagcagcagaatcagcagcttcagctgcagcaaatCTCGCCGAGACGCGCGCCCGAGCACGAGAAGCTGTCGCAGCGGGAGAAGCTGATGCGCGACATCGAGCAGCGGCGCCTGGAGTGTCTGGTGTGCGTGGAGCAGATCAAGGCGCACCACGGCACCTGGTCCTGCCAGAACTGCTATCACGTGCTGCACCTCAAGTGCACCATTACGTGGGCGAGCAGCTCCAAGTCGGCGGAGGGCTGGCGCTGTCCGGCCTGCCAGAACGtgctgcaggagctgcccCGGGAGTACCTCTGCTTTTGCGGCAAGCTGAAGAATCCGCCGCTGACGCGCACCGAGCTCGCCCACAGCTGCGGCGAGCTGTGCTGCCGCGTCGAGGGCTGTGCGCACGCGTGCACGCTGCTGTGCCACCCGGGGCCGTGTCCGGCGTGCCAGGCGAACGTGAGtcgcagctgcggctgcggccgcACCACCAAGCTGATGCAGTGCGCCCTCAAGCAGCCGCTCCAGTGCGACGCCAGCTGCGACAAGCTGCTCAACTGCGGCGAGCATCGGTGCCAGCAGCGCTGCCACGCCGGCAAGTGCGAGCCGTGCGCCGAGCAGGTGCCGCAGCGCTGCCACTGCGGCAAGCAGCAGCGGTCGGTGCTGTGCACCCGGGAGAGCCAGGACAAGCGCAGCTACTCGTGCAAGGAGTGCTGCGGCCAGCCGCTGCCCTGCGGCAATCACAAGTGCAAGGACTCGTGCCACGCGGCCGCCTGTCGTCCCTGCAAGCTGAGTCCCATGCAGATCACCAGCTGTCCGTGCGGCAAGCTGGCCGTGCCGCCCGACCAGCGCACCAGCTGCCTCGACCCGGTGCCGACCTGCGAGGGCGTCTGCGGCAAGACGCTGCGCTGCGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAGTGTCATCTGGGCCAGTGTCCGCCGTGTCCCAAGCAGACGGCGGTCAAGTGCCGTTGCGGGCACATGGACCAGCTGATCAAGTGCCGGCAGCTGTCGACGCGGGCGGACGACGCGCGCTGCAAGCGCCGCTGCACGAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAACGCCGAGTGCTGCATCGACATCGATCACGCCTGCCCGCTGCCCTGCAACCGGACGCTCAGCTGCGGCCGGCACAAGTGCGACCAGCCGTGCCATCGCGGCAACTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGCGCCGAGGTGATCTACCCGCCGGTGCCGTGCGGCACCAAGAAGCCCGTCTGCAAGCGACCCTGCTCGCGCACCCACGGCTGCGAGCACGCGCCGCAGCACAACTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACGACGAAGTGGTGCCACGGCGGCCACGAGCAGCGCAAGACCATACCCTGCTCCCAGGCCAGCTTCAGCTGCGGGCTGGCCTGCGGACGGCCGCTCGCCTGCGGCCGACACAAGTGCATCCGGCCCTGCCACGAGGGCGACTGCCAGCTGGCGGCCGGCGAGCTGTGCCGCCAGAGCTGCACGAAGCCCCGGCTGCTGTGCGGACATCGGTGTGCGGCCGCCTGCCACGAGGGCGCCTGCCCGGAGACGCCGTGCAAGGAGCTCGTCGAGGTCCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAGCTCGCCCGGGAGCACAGCCGCATCGCCACCGCTCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAGATTCTCGCGcccaacaagaacaacaagtcCAACAAAACCTTGGACTGCAACGATGAGTGTCGCCTGTTGGAGCGCAATCGCCGCTTGGCCATTGGCCTGCAGTCGCGCAATCCGGACGCGCAGCTGAAGTTGCTGACCAAGTACTCGGAGTTCTTGCGCGGCTTCGCCAAGCGCAATCCGGCGCTCACGAAGAGCGTCTACGAAACGCTCACCGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAGAAGTCGCGGAGTCACTCGTTTCCCACCATGAATCGCGAGAAGCGTCAGCTGGTCCACGAGCTGTGCGAAGTTTTTGGCGTGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGCAATGTGGTCGCCACGGCGCACAAGGAACGCTGCTGGCTGCCTGCCACTAGCATTATGGAGGTGCTGGCACGCGAATCGGGCCAACGGCGCGTGCCCGTGCCGAGCAACAATGCCTGGGGCCTCAAAAAGTAG
Protein Sequence: MAEYWRQQQQQQLQQQQQQQQQLLQQQPQLTNGAESANGHNNNNNYVNFNQFITQHNLASASLGYSVGGGGAFGLTPNSSSGSGASSNSNSNNFGGGSLCAPVFYAHQNGHGSSYGQLYTPFGNNPFAAAGGYDFSASKLQATAPEFVPNFAKLSLTAAAQEEPESEPASATAAAAAAASISKSQSNNSNNNTATQPGEAAAASQQRVEQRPPNNSRQQQRRNDYREERNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYNRAADELDTSNSNDSAQPSPEKQQQQQQNQQLQLQQISPRRAPEHEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCAHACTLLCHPGPCPACQANVSRSCGCGRTTKLMQCALKQPLQCDASCDKLLNCGEHRCQQRCHAGKCEPCAEQVPQRCHCGKQQRSVLCTRESQDKRSYSCKECCGQPLPCGNHKCKDSCHAAACRPCKLSPMQITSCPCGKLAVPPDQRTSCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCSRTHGCEHAPQHNCHAAASCPPCMMFTTKWCHGGHEQRKTIPCSQASFSCGLACGRPLACGRHKCIRPCHEGDCQLAAGELCRQSCTKPRLLCGHRCAAACHEGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNDECRLLERNRRLAIGLQSRNPDAQLKLLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00496269;
90% Identity: iTF_00589233;
80% Identity: -