Basic Information

Insect: Drosophila mimica
Gene Symbol: stc
Assembly: GCA_037043585.1
Location: JBAMBE010000578.1:1443677-1447460[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4 1.2e+04 -3.6 0.5 15 18 343 346 342 347 0.79

2 16 2 1.7e+04 -4.1 1.6 15 19 370 374 369 374 0.81

3 16 0.015 1.3e+02 2.7 2.5 4 11 403 410 402 411 0.91

4 16 5.8e-07 0.005 16.8 15.1 1 19 415 432 415 432 0.93

5 16 0.27 2.4e+03 -1.4 1.8 6 12 458 464 457 464 0.88

6 16 2.6e-07 0.0023 17.9 10.5 1 18 468 485 468 486 0.96

7 16 2 1.7e+04 -6.2 3.9 7 13 490 496 490 497 0.74

8 16 2e-09 1.7e-05 24.7 12.9 1 19 526 544 526 544 0.98

9 16 1.1 9.5e+03 -3.3 0.5 5 10 574 579 574 579 0.90

10 16 2.3e-05 0.2 11.6 17.0 4 19 592 607 585 607 0.88

11 16 0.057 4.9e+02 0.8 11.6 1 11 647 657 647 669 0.79

12 16 4.7e-10 4e-06 26.7 15.5 1 18 674 691 674 692 0.97

13 16 1.4 1.2e+04 -3.6 1.5 6 10 721 725 720 726 0.61

14 16 1.8 1.5e+04 -3.9 8.7 7 18 736 748 728 749 0.82

15 16 1.2e-08 0.0001 22.2 11.4 1 16 785 800 785 803 0.96

16 16 7.9e-08 0.00068 19.5 12.5 1 19 818 837 818 837 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4	1.2e+04	-3.6	0.5	15	18	343	346	342	347	0.79
2	16	2	1.7e+04	-4.1	1.6	15	19	370	374	369	374	0.81
3	16	0.015	1.3e+02	2.7	2.5	4	11	403	410	402	411	0.91
4	16	5.8e-07	0.005	16.8	15.1	1	19	415	432	415	432	0.93
5	16	0.27	2.4e+03	-1.4	1.8	6	12	458	464	457	464	0.88
6	16	2.6e-07	0.0023	17.9	10.5	1	18	468	485	468	486	0.96
7	16	2	1.7e+04	-6.2	3.9	7	13	490	496	490	497	0.74
8	16	2e-09	1.7e-05	24.7	12.9	1	19	526	544	526	544	0.98
9	16	1.1	9.5e+03	-3.3	0.5	5	10	574	579	574	579	0.90
10	16	2.3e-05	0.2	11.6	17.0	4	19	592	607	585	607	0.88
11	16	0.057	4.9e+02	0.8	11.6	1	11	647	657	647	669	0.79
12	16	4.7e-10	4e-06	26.7	15.5	1	18	674	691	674	692	0.97
13	16	1.4	1.2e+04	-3.6	1.5	6	10	721	725	720	726	0.61
14	16	1.8	1.5e+04	-3.9	8.7	7	18	736	748	728	749	0.82
15	16	1.2e-08	0.0001	22.2	11.4	1	16	785	800	785	803	0.96
16	16	7.9e-08	0.00068	19.5	12.5	1	19	818	837	818	837	0.96

Sequence Information

Coding Sequence: ATGGCCGAAtattggcaacagcagcagcaacaacagcagcagcagccgccaacacagcaacagcagctaacaAATGGAGCAGCAGCTCATGACTCAGCCGCCGCTGGTTCtatcgctgccgctgcctccGTCGCTGACTGCAATGGGCagagtaacaacaacaacaactatgtTAACTTCAATCAGTTCATCACGCAGCATAATTTACACAGCTCCAATCTCGGCTATAGCGGCGGTGGTAGCAGCGGCGGAGCATTTGGGCTGACGCCCGCtagctgcagcggcagcgctGCCTCCAGCTTTGACGTCGGCCAATATGCGGCGCCTGTTTTTGGTTATCAGAATGGCGATGGCGTTGGCCAACAATATCCCAATTTGTACTCAGCCTTTGGCAATAATCCATTTGCTGCGCCTGCTGCCGGCGGCGCCTCTTTCGATTTTAGTACTTCCAAGCTGCAGGCAACGGCGCCCGAATTTGTGCCCAACTTCGCCAAGCTCAGCCTGTCGACGAGcaaagccaacagcagcagcaccaatagcaataataataatagcaacaacagcaacactgcCACAACAGAGCACACGCCACATgaggcagccagcagcaatgCTCAACGAGGCTTGGCGAAGCCGCTGGTTGGAGGCAATAATactcggcagcagcagcggcgccagGACTATCGCGAGGATCGCCACGAGGATCGCTATGAGCGTGGCAAGAAGccgcagaagcagcagcgctaCGACAATCATCGCAGCAACAAAAGACGCGACGACTGGAATCGCAATCGTGATCGCATTAATGGCTACCCGCGCGCCGCCGACGAACTggacaccagcaacagcaacgacagcgCCCAACCCTCGCCCGAGAAGCAGCTGCCTAACCAAGTGTCCCCTCGACGTGCACCCGACAATGAGAAGCTGTCGCAGCGGGAGAAGCTGATGCGCGATATCGAGCAGCGACGACTGGAGTGCTTGGTGTGCGTGGAGCAGATTAAGGCGCATCATGGCACGTGGTCGTGCCAAAATTGCTATCATGTGCTGCATCTCAAATGCACCATCACCTGGGCGAGCAGTTCCAAGTCGGCGGAAGGCTGGCGCTGTCCAGCCTGCCAGAATGTTCTGCAAGAGCTGCCGCGCGAGTATCTCTGCTTCTGTGGCAAGCTGAAGAATCCGCCGCTCACACGCAACGAGCTGGCGCACACTTGCGGCGAACTCTGCTGCCGCGTCGAGGGCTGTAGTCATGCGTGCACCCTGCTCTGTCATCCGGGTCCGTGTCCGCCGTGCCAGGCGAACGTGTTGCGCAGCTGTGGCTGCGGACGCACCTCCAAGTTGATGCAGTGCGCCATGAAGCAACCACTGCAGTGTGAGGCCGACTGCCACAAGGCACTCAACTGCGCCGAGCATCTTTGCCAGCAGTTGTGCCATGCGGGCAAATGTGAGCCGTGTGCAGAGCAGGTGGAGCAACACTGCcactgtggcaagcagcagcgcGAGGTGCTCTGCACCAAGGAGAGTCAGGACAGGCGCAGTTACTCGTGCAAGGAGTGCTGTGGCAAACCGTTGCCCTGCGGCAATCATAAGTGCAAGGATTCGTGCCACGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCGCAGCAGATCACCAGTTGCCCCTGTGGCAAGTTGGCTGTGCCTCCGACGCAGCGCAGCAGTTGCCTGGATCCGGTGCCGACGTGCGAGGGCGTGTGTGGCAAGACGCTGCGCTGTGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAATGCCATTTGGGGCAGTGTCCGCCGTGCCCCAAACAGACGGCCGTTAAATGCCGTTGCGGCCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCGACCCGGGCGGACGATGCACGCTGCAAGCGCCGTTGCACGAAGAAACGCAGCTGtggcaaacacaaatgcaaCGCGGAATGTTGCATCGACATCGACCATGCCTGCCCGCTGCCCTGCAACCGAACGCTGAGCTGCGGCAAACACAAGTGCGATCAGCCCTGCCATCGCGGCAATTGTCCGCCCTGCTACCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGTGCCGAAGTGATCTATCCACCGGTGCCGTGTGGCACAAAGCGGCCCCCCTGCAAGCGTCCCTGTTCGCGCACCCACGGCTGCGAGCATGTGACGCAGCACACTTGCCATGCAGCGGCTAGCTGCCCGCCCTGCATGATGTTTACCACAAAGTGGTGCCACGGTAATCACGAGCAGCGCAAGACGATTCCCTGCTCGCAGTCTAGCTTCAGCTGTGGCTTCTCCTGCGCCAAGCCGCTCGCGTGTGGCCGCCATAAATGCATCCGGCCGTGCCACGAGGGCGAGTGCCCACAGCAGCCGGGCGAGCTGTGTCGCCAGAACTGCACCAAGCCGCGTCTGTTGTGCGGCCACAAGTGTGCCGCCGTGTGCCACGATGGCGCCTGTCCCGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAACTTGCACGGGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAAATGTCGCGCGGTAACTACATGGAGCTCAGCGAAATATTCGCAcccaccaaaaacaacaaatccaaTAAAACCTTGGACTGCAATGAGGAGTGCCGCTTGCTGGAGCGCAATCGCCGCTTGGCCATTGGACTGCAGTCACGAAATCCGGAGTCGCAGCTCAAGTCGCAGCTCAAGTCGCTGACGAAGTACTCGGAATTCTTGCGCGGCTTTGCTAAACGCAATCCGGTGCTAACCAAGAGCGTCTACGAGACGCTCAGCGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCACGCAGTCACTCGTTCCCCACGATGAATCGAGAGAAGCGTCAAATGGTGCACGAGCTGTGCGAAGTGTTTGGCGTCGAGTCCGTCTCATATGACAAGGAGCCCAATCGCAACGTGGTCGCCACCGCGCACAAGGAACGCTGCTGGTTGCCCGCCACTAGCGTCATGGAGGTCCTGGCCCGCGAGTCCGGTCAGCGTCGTGTTCCGGTGCCCAGCAACAATGCCTGGGGCCTCAAGAAGTAG
Protein Sequence: MAEYWQQQQQQQQQQPPTQQQQLTNGAAAHDSAAAGSIAAAASVADCNGQSNNNNNYVNFNQFITQHNLHSSNLGYSGGGSSGGAFGLTPASCSGSAASSFDVGQYAAPVFGYQNGDGVGQQYPNLYSAFGNNPFAAPAAGGASFDFSTSKLQATAPEFVPNFAKLSLSTSKANSSSTNSNNNNSNNSNTATTEHTPHEAASSNAQRGLAKPLVGGNNTRQQQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNSNDSAQPSPEKQLPNQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRSCGCGRTSKLMQCAMKQPLQCEADCHKALNCAEHLCQQLCHAGKCEPCAEQVEQHCHCGKQQREVLCTKESQDRRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLAVPPTQRSSCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHVTQHTCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQSSFSCGFSCAKPLACGRHKCIRPCHEGECPQQPGELCRQNCTKPRLLCGHKCAAVCHDGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEIFAPTKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPESQLKSQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00496269;
90% Identity: iTF_00607498;
80% Identity: -