Dmur004948.1
Basic Information
- Insect
- Drosophila murphyi
- Gene Symbol
- stc
- Assembly
- GCA_018904325.1
- Location
- JAEIFX010001243.1:6097763-6102049[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.4 1.1e+04 -3.6 0.5 15 18 338 341 337 342 0.79 2 16 2 1.6e+04 -4.1 1.6 15 19 365 369 364 369 0.81 3 16 0.015 1.2e+02 2.7 2.5 4 11 398 405 397 406 0.91 4 16 5.7e-07 0.0047 16.8 15.1 1 19 410 427 410 427 0.93 5 16 2 1.6e+04 -4.2 1.4 6 10 453 457 452 457 0.87 6 16 6.3e-08 0.00051 19.9 11.5 1 18 463 480 463 481 0.93 7 16 2 1.6e+04 -6.2 3.9 7 13 485 491 485 492 0.74 8 16 2e-09 1.6e-05 24.7 12.9 1 19 521 539 521 539 0.98 9 16 2 1.6e+04 -5.4 1.3 11 16 570 575 570 575 0.67 10 16 2.3e-05 0.19 11.7 17.0 4 19 587 602 580 602 0.88 11 16 0.057 4.6e+02 0.8 11.6 1 11 642 652 642 664 0.79 12 16 4.6e-10 3.8e-06 26.7 15.5 1 18 669 686 669 687 0.97 13 16 1.6 1.3e+04 -3.8 1.8 6 10 716 720 714 721 0.61 14 16 2 1.6e+04 -5.8 9.5 9 18 733 743 723 744 0.79 15 16 2.6e-08 0.00022 21.1 12.6 1 16 780 795 780 803 0.95 16 16 7.8e-08 0.00064 19.6 12.5 1 19 813 832 813 832 0.96
Sequence Information
- Coding Sequence
- ATGACTCGTTACTTGCGTGATAATACCTGTGAAATCGCCTCTGCCTCTACCGCTGCCGCTGCCTCAGTCGATGCCTGCAATGGGCAGAGCAACAACAACAACAACTATGTTAACTTCAATCAGTTCATCACACAGCATAATTTACACAGCTCCAATCTCGGCTACAGCAGCGGCAGCGGCGACGGCGGCGTCGGCAGCGGCGGTGACGGCAGCGGCGGTGCCTTTGGCCTGACGCCCGCCAGCAGCAGCGGTAGCGCTGCCAACAACTCCAGCTTTGGCGTCGGCCAATATGGTGTGCCTATTTTCGGCTATCAGAATGGCGATGGCGCTGGCCAAAATTATCCCAATTTGTACTCATCTTTTGGCAATTATCCATTTGCTGCGCCTGCTGCCGGCGGCGCCGCTTTCGATTTTAGCGCTTCCAAGCTGCAGGCGACGGCACCCGAATTTGTGCCCAACTTCGCCAAGCTCAGCCTGTCGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCCACAACACAGCACACGCCACATGAGGCAGCTAGCAGCAATGCTCAACGAGGCTTGGCGAAGCCGCTGCCTGGCGGCAATAATACTCGGCAGCAGCAGCGACGCCAGGACTATCGCGAAGATCGCCACGAGGATCGCTATGAGCGTGGTAAGAAGCCGCAGAAGCAGCAGCGCTATGACAATCATCGCAGCAACAAAAGACGCGACGACTGGAATCGCAATCGTGATCGCATCAATGGCTATCCGCGCGCGGCCGACGAACTGGACACCAGCAACAGCAACGACAGTGCGCAGCCCTCGCCCGAGAAGCAACTGCCACACCAAGTCTCCCCTCGCCGAGCGCCCGACAATGAGAAGCTGTCGCAGCGGGAGAAGCTAATGCGCGACATCGAGCAACGTCGACTGGAGTGCTTAGTTTGCGTGGAGCAGATCAAGGCGCATCATGGCACATGGTCGTGCCAGAACTGCTATCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCGAGCAGTTCCAAGTCGGCGGAGGGCTGGCGCTGTCCAGCCTGCCAGAATGTGCTGCAAGAGTTGCCACGCGAATATCTCTGCTTCTGTGGCAAGCTGAAAAATCCGCCGCTCACACGCAACGAGCTGGCGCACACTTGCGGCGAACTCTGCTGTCGTGTCGAGGGCTGCAGTCATGCGTGCACCCTGCTCTGTCATCCGGGCCCGTGTCCACCGTGCCAGGCGAACGTGTTGCGCAGCTGTGGCTGCGGACGCACTTCGAAGCTGATGCAGTGCGCCATGAAGCAGCAACTGCAGTGCGAGGCCACCTGCGACAAGCCACTCAACTGCGTCGAGCATCGTTGCCAGCAGTTGTGCCATGCGGGCAAATGTGAGCCGTGTGCGGAGCTGGTGGAGCAACACTGCCACTGTGGCAAGCAGCAGCGCGAGGTGCTCTGCACCAAGGAGAGTCAAGATAGGCGCAGCTATTCGTGCAAGGAGTGCTGCGGCAAGCCGTTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGCCACGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCGCAGCAGATCACCAGTTGCCCCTGTGGCAAGTTGGCAGTGCCTCCGACGCAGCGCAGCAGCTGTCTGGATCCGGTGCCGACATGCGAGGGCGCGTGCGGCAAGACGCTGCGCTGTGGCAAGCCGGCGCATCCGCATCAGTGCGCAAGCAAATGCCATTTGGGGCAGTGTCCGCCGTGCCCCAAACAGACGGCCGTCAAATGTCGTTGCGGCCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCGACCCGGGCGGACGATGCACGCTGCAAGCGCCGTTGCACGAAGAAACGCAGCTGTGGAAAGCACAAATGCAACGCGGAATGTTGCATCGACATCGACCATGCCTGTCCGCTGCCCTGCAACCGAACACTGAGCTGCGGCAAACACAAGTGCGATCAGCCCTGCCATCGGGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGTGAGTGCGGCGCCGAAGTGATCTATCCACCGGTGCCGTGTGGCACCAAACGGCCGCCCTGCAAACGGCCCTGTTCGCGCACTCACGGCTGCGAGCATGTGCCGCAGCACAGTTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAATCACGAGCAGCGCAAGACGATACCCTGCTCGCAGGCCAGCTTCAGCTGTGGCTTTCCCTGCGCCAAGCCGCTCGCGTGTGGCCGCCATAAATGCATCCGGCCGTGCCACGAGGGCGAGTGTCCGCAGCAGCCGGGCGAGCTGTGCCGCCAGAGCTGCACCAAGCCTCGTCTGTTGTGTGGCCATAAGTGTGCCGCTGTCTGCCACGATGGCGCCTGTCCAGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAACTTGCCCGGGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAATTACATGGAGCTCAGCGAAATACTTGCACCCACCAAAAACAACAAATCCAACAAAACTTTGGACTGCAACGAGGAGTGTCGTCTGCTGGAGCGCAATCGCCGCTTGGCCATTGGACTGCAGTCTCGGAATCCGGAGTCGCAGCTGAAGTCGCTGACGAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGTGTTAACCAAGAGCGTCTACGAAACGCTCAGCGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCGCGCAGTCACTCGTTCCCCACGATGAATCGCGAGAAGCGTCAAATGGTGCACGAGCTGTGCGAAGTGTTTGGCGTGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGCAACGTGGTCGCCACCGCGCACAAGGAACGCTGCTGGTTGCCCGCCACTAGCGTCATGGAGGTCCTGGCCCGCGAGTCCGGTCAGCGTCGCGTCCCGGTGCCCAGCAACAATGCCTGGGGAATCAAGAAGTAG
- Protein Sequence
- MTRYLRDNTCEIASASTAAAASVDACNGQSNNNNNYVNFNQFITQHNLHSSNLGYSSGSGDGGVGSGGDGSGGAFGLTPASSSGSAANNSSFGVGQYGVPIFGYQNGDGAGQNYPNLYSSFGNYPFAAPAAGGAAFDFSASKLQATAPEFVPNFAKLSLSTXXXXXXXXXXXXXXXXXXXXXXXXATTQHTPHEAASSNAQRGLAKPLPGGNNTRQQQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNSNDSAQPSPEKQLPHQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRSCGCGRTSKLMQCAMKQQLQCEATCDKPLNCVEHRCQQLCHAGKCEPCAELVEQHCHCGKQQREVLCTKESQDRRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLAVPPTQRSSCLDPVPTCEGACGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHVPQHSCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGFPCAKPLACGRHKCIRPCHEGECPQQPGELCRQSCTKPRLLCGHKCAAVCHDGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPESQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGIKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00496269;
- 90% Identity
- iTF_00514573;
- 80% Identity
- -