Basic Information

Insect: Drosophila longiperda
Gene Symbol: stc
Assembly: GCA_035042125.1
Location: JAWNLV010000145.1:1335154-1339388[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.4 1.3e+04 -3.6 0.5 15 18 353 356 352 357 0.79

2 14 2 1.7e+04 -4.1 1.6 15 19 380 384 379 384 0.81

3 14 0.015 1.3e+02 2.7 2.5 4 11 413 420 412 421 0.91

4 14 5.8e-07 0.0051 16.8 15.1 1 19 425 442 425 442 0.93

5 14 2.3e-08 0.0002 21.3 10.9 1 18 478 495 478 496 0.96

6 14 2 1.8e+04 -6.3 3.9 7 13 500 506 500 507 0.74

7 14 2e-09 1.8e-05 24.7 12.9 1 19 536 554 536 554 0.98

8 14 3.3e-05 0.3 11.2 16.3 4 19 602 617 595 617 0.87

9 14 0.057 5.1e+02 0.8 11.6 1 11 657 667 657 679 0.79

10 14 4.7e-10 4.2e-06 26.7 15.5 1 18 684 701 684 702 0.97

11 14 1.4 1.3e+04 -3.6 1.5 6 10 731 735 730 736 0.61

12 14 2 1.8e+04 -7.7 9.7 10 18 749 758 738 759 0.76

13 14 1.2e-08 0.00011 22.2 11.4 1 16 795 810 795 813 0.96

14 14 8.1e-08 0.00072 19.5 13.0 1 19 828 847 828 847 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.4	1.3e+04	-3.6	0.5	15	18	353	356	352	357	0.79
2	14	2	1.7e+04	-4.1	1.6	15	19	380	384	379	384	0.81
3	14	0.015	1.3e+02	2.7	2.5	4	11	413	420	412	421	0.91
4	14	5.8e-07	0.0051	16.8	15.1	1	19	425	442	425	442	0.93
5	14	2.3e-08	0.0002	21.3	10.9	1	18	478	495	478	496	0.96
6	14	2	1.8e+04	-6.3	3.9	7	13	500	506	500	507	0.74
7	14	2e-09	1.8e-05	24.7	12.9	1	19	536	554	536	554	0.98
8	14	3.3e-05	0.3	11.2	16.3	4	19	602	617	595	617	0.87
9	14	0.057	5.1e+02	0.8	11.6	1	11	657	667	657	679	0.79
10	14	4.7e-10	4.2e-06	26.7	15.5	1	18	684	701	684	702	0.97
11	14	1.4	1.3e+04	-3.6	1.5	6	10	731	735	730	736	0.61
12	14	2	1.8e+04	-7.7	9.7	10	18	749	758	738	759	0.76
13	14	1.2e-08	0.00011	22.2	11.4	1	16	795	810	795	813	0.96
14	14	8.1e-08	0.00072	19.5	13.0	1	19	828	847	828	847	0.96

Sequence Information

Coding Sequence: ATGGCCGAAtattggcaacagcagcaacaacaacagccgccaccatcgcagcaacagcagctaacaAATGGAGTAGCAGCTCATATTGACTCAGTCGCCGCTGCTTCTATCGCAGCCGGTACCTCTGTCGCTGCCTGCAACGggcagagcaacaacaacaacaactatgtTAACTTCAATCAGTTCATCTCGCAGCATAATTTTCACAGCTCCAATCTCGGGTATAGCGAGTATAGCGGCGTTGGCGGTGGCGGTGCATTCGGCTTGACGCCGGCCAGCTGCAGCGGTAGCGCTGCCAACAACTCCTCCAGCTTCGGCGTCGGCCAATATGCGGCACCTAGTTTTGGCTATCAAAATGGCGATGGGGCTGGCCAACATAATCCCAATTTGTACTCCACCTTTGGCAATAACCCATTTGCTGCGCCTGTTGCCGGCGGAGCCGCTTTCGATTTTAGCACTTCCAAGCTGCAGGCAACGGCACCCGAATTTGTGCCCAACTTCGCCAAGCTCAGCCTGTCGACGAGcaaagccaacagcagcagcagcagcagcaacaatagcaataataacaataatagcaacaacagcaacactgcCACAACCCAGCACACGCCACATGAGGCTCCCAGCAGCCATGCTCAACGAGGCTTGACGAAGCCGCTcgctggcagcaacaatacTCGCCAGCAACAGCGACGCCAGGACTATCGCGAGGATCGCCATGATGATCGGTATGAACGTGGCAAAAAGCCGCAGAAGCAACAGCGCTACGACAATCATCGCAGCAACAAAAGACGCGACGACTGGAATCGCAATCGTGATCGCATCAACGGCTATCCGCGCGCCGCCGACGAACtggacaacagcaacgacagcgCCCAGCCCTCGCCTGAGAAGCAGACcgaaaaacaactgcaacaccaAGTCTCCCCTCGCCGTGCGCCCGACAATGAGAAGCTGTCGCAGAGGGAGAAGCTAATGCGCGACATTGAGCAGCGGAGACTGGAGTGCTTGGTGTGCGTGGAGCAGATCAAGGCGCATCATGGCACGTGGTCGTGCCAGAACTGCTATCATGTGCTGCATCTGAAATGCACCATCACCTGGGCGAGCAGTTCCAAGTCGGCGGAGGGCTGGCGTTGTCCAGCCTGCCAGAATGTGCTGCAAGAGGTGCCGCGCGAGTATCTCTGCTTCTGTGGCAAGCTAAGGAATCCGCCACTCACACGCAACGAGCTGGCGCACACTTGCGGCGAACTCTGCTGCCGCGTCGAGGGCTGCAGTCATGCGTGCACCCTGCTCTGTCATCCGGGTCCGTGTCCGCCGTGCCAGGCAAACGTGTTGCGCAGCTGTGGCTGCGGACGCACCTCCAAACTGATGCAGTGCGCCAtgaagcagcagttgcagtgcGAGGACGCTTGCGACAAGCCACTCAATTGCGCCGAGCATCGTTGCGAGCAGCTGTGCCATGCGGGAAAATGTGAGCCGTGTGTGGAGCAGGTGGAGCAACACTGTCACTGTGGTAAGCAGCAGCGCGAGGTGCTCTGCACCAAGGAGAGTCAGGACAAGCGTAGCTACTCGTGCAAGGAGTGCTGTGGCAAGCCGTTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGTCACGCCGGCGCATGTCGTCCCTGCAAGCTGAGTCCGCAGCAGATCACTAGTTGCCCCTGTGGCAAGTTGGCTGTCCCTCCGACGCAGCGTAGCATCTGCCTGGATCCGGTGCCTACGTGCGAGGGCGCGTGTAGCAAGACGCTGCGCTGTGGCAAGCCGGCGCATCCTCATCAGTGTGCCAGCAAATGCCATTTGGGGCAGTGTCCGCCATGCCAAAAGCAAACGGCCGTTAAATGCCGTTGCGGCCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCTTCCCGGGCGGACGATGCGCGCTGCAAACGTCGTTGCACGAAGAAACGCAGCTGTggcaaacacaaatgcaatgcGGAATGTTGCATCGACATAGACCATGCCTGCCCACTGCCCTGCAACCGTACGCTGACCTGCGGCAAGCACAAGTGCGATCAGCCCTGCCATCGCGGCAATTGTCCACCTTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGCGAATGCGGCGCCGAAGTGATCTACCCACCGGTGCCGTGTGGCACAAAGCGGCCGCCCTGCAAGCGGCCCTGTTCTCGCACCCACGGCTGCGAGCATGTGCCGCAGCACAATTGCCATGCGGCGACTACCTGTCCGCCGTGCATGATTTTCACCACGAAGTGGTGCCACGGTAATCACGAGCAGCGCAAGACGATTCCCTGCTCGCAGGCTAGCTTTAGCTGTGGCTTTCCCTGCGCGAAGCAGCTCGCGTGTGGCCGCCATAAGTGCATCCGGCCGTGCCACGAGGGCGAGTGTCCACAGCAGCCGGGCGAGCTGTGCCGCCAAAACTGCACCAAGCCGCGTCTGCTGTGCGGTCACAAGTGTTCCGCTGTCTGCCACGATGGTGCCTGCCCCGAAACGCCCTGCAAGGAGCTCGTCGAAGTGCAGTGCGAGTGCGGCAATCGCAAACAGAACCGCAGCTGCCAGGAACTTGCCCGGGAGCACAGTCGCATTGCCACTGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAAATACTCGCAcccaccaaaaacaacaaatccaATAAAACCTTGGACTGCAATGAGGAGTGTCGCCTACTGGAGCGCAATCGCCGCTTGGCCATTGGACTGCAATCTCGGAATCCGGAGTCGCAGCTCAAGACGCTGACGAAGTACTCGGAATTCATGCGCGGTTTTGCGAAACGCAATCCGGTGCTAACCAAGAGCGTCTACGAAACGCTCAGTGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCACGCAGTCACTCGTTCCCCACGATGAATCGCGAGAAGCGTCAAATGGTGCACGAACTGTGCGAAGTGTTTGGCCTGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGCAACGTGGTCGCCACCGCGCACAAGGAACGCtgCTGGTTGCCCGCCACTAGCGTCATGGAGGTTCTGGCCCGCGAGTCCGGTCAGCGTCGCGTCCCGGTGCCCAGCAACAATGCCTGGGGCCTCAAGAAGTAG
Protein Sequence: MAEYWQQQQQQQPPPSQQQQLTNGVAAHIDSVAAASIAAGTSVAACNGQSNNNNNYVNFNQFISQHNFHSSNLGYSEYSGVGGGGAFGLTPASCSGSAANNSSSFGVGQYAAPSFGYQNGDGAGQHNPNLYSTFGNNPFAAPVAGGAAFDFSTSKLQATAPEFVPNFAKLSLSTSKANSSSSSSNNSNNNNNSNNSNTATTQHTPHEAPSSHAQRGLTKPLAGSNNTRQQQRRQDYREDRHDDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDNSNDSAQPSPEKQTEKQLQHQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQEVPREYLCFCGKLRNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRSCGCGRTSKLMQCAMKQQLQCEDACDKPLNCAEHRCEQLCHAGKCEPCVEQVEQHCHCGKQQREVLCTKESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLAVPPTQRSICLDPVPTCEGACSKTLRCGKPAHPHQCASKCHLGQCPPCQKQTAVKCRCGHMDQLIKCRQLSSRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLTCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHVPQHNCHAATTCPPCMIFTTKWCHGNHEQRKTIPCSQASFSCGFPCAKQLACGRHKCIRPCHEGECPQQPGELCRQNCTKPRLLCGHKCSAVCHDGACPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPESQLKTLTKYSEFMRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGLESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00496269;
90% Identity: iTF_00607498;
80% Identity: -