Dneo001166.1
Basic Information
- Insect
- Drosophila neoperkinsi
- Gene Symbol
- stc
- Assembly
- GCA_037043555.1
- Location
- JBAMBG010000804.1:7482-10855[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.9 1.1e+04 -3.5 0.5 15 18 244 247 243 248 0.79 2 15 2.7 1.6e+04 -3.9 1.6 15 19 271 275 270 275 0.81 3 15 0.02 1.2e+02 2.9 2.5 4 11 304 311 303 312 0.91 4 15 7.7e-07 0.0046 16.9 15.1 1 19 316 333 316 333 0.93 5 15 2.8 1.7e+04 -4.0 1.4 6 10 359 363 358 363 0.87 6 15 3.2e-08 0.00019 21.4 11.4 1 18 369 386 369 387 0.96 7 15 3 1.8e+04 -6.1 3.9 7 13 391 397 391 398 0.74 8 15 2.7e-09 1.6e-05 24.8 12.9 1 19 427 445 427 445 0.98 9 15 3.1e-05 0.19 11.8 17.0 4 19 493 508 486 508 0.88 10 15 0.078 4.7e+02 1.0 11.6 1 11 548 558 548 570 0.79 11 15 6.3e-10 3.8e-06 26.8 15.5 1 18 575 592 575 593 0.97 12 15 2.1 1.3e+04 -3.6 1.8 6 10 622 626 620 627 0.61 13 15 3 1.8e+04 -5.7 9.6 9 18 639 649 629 650 0.79 14 15 3.6e-08 0.00021 21.2 12.6 1 16 686 701 686 709 0.95 15 15 1.1e-07 0.00064 19.7 12.5 1 19 719 738 719 738 0.96
Sequence Information
- Coding Sequence
- ATGTTGCAGCAATATGCGGCGCCTGTTTTTGGCTATCAGAATGGCGATGCCGCTGGCCAACATTATCCCAATTTGTACTCAGCCTTTGGCAGTAATCCATttgctgcgcctgctgctggcggcgccTCTTTCGATTTTAGCGCTTCCAAGCTGCAGGCGACGGCGCCTGAATTTGTGCCCAACTTCGCCAAGCTCAGCCTGTCGACGAGcaaagccaacagcagcagcagtaatagcaataataataataataatagcaacaacagcaacactgcCACAATACAGCACACGCCACATGAGGCAGCTAGCAGCAATGCTCAACGAGGCTTGGCGAAGCCGCTGGCTGGCGGCAATAATtctcggcagcagcagcgacgccaggACTATCGCGAAGATCGCCACGAGGATCGCTATGAGCGTGGCAAGAAGccgcagaagcagcagcgctATGACAATCATCGCAGCAACAAAAGACGCGACGACTGGAATCGCAATCGTGACCGCATCAATGGCTATCCGCGCGCCGCCGACGAACTggacaccagcaacagcaacgacagtGCGCAGCCTTCGCCCGAGAAGCAGCTGCCACACCAAGTCTCCCCTCGGCGAGCGCCCGACAATGAGAAGCTGTCGCAGCGGGAGAAGCTGATGCGCGACATCGAGCAGCGGCGACTGGAGTGCTTAGTGTGCGTGGAGCAGATCAAGGCGCATCATGGCACGTGGTCGTGCCAGAACTGCTATCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCGAGCAGTTCCAAGTCGGCGGAGGGCTGGCGCTGTCCAGCCTGCCAGAATGTGCTGCAAGAGTTGCCGCGCGAATATCTCTGCTTCTGTGGCAAGTTGAAGAATCCGCCGCTCACACGCAACGAGCTGGCGCACACTTGCGGCGAACTCTGCTGTCGCGTCGAGGGTTGCAGTCATGCGTGCACCCTACTCTGTCATCCGGGTCCGTGTCCGCCGTGCCAGGCGAACGTGTTGCGCAGCTGTGGCTGCGGACGCACCTCCAAGCTGATGCAGTGCGCCAtgaagcagcaactgcagtGCGAGGCCACCTGCGACAAGCCACTCAACTGCGCCGAGCATCGTTGCCAGCAGTTGTGCCATGCGGGCAAATGTGAGCCGTGTGCGGAGCAGGTGGAGCAACACTGCCactgtggcaagcagcagcgcGAGGTGCTCTGCACCAAGGAGAGTCAGGATAGGCGCAGCTATTCGTGCAAGGAGTGCTGCGGCAAGCCGTTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGCCACGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCGCAGCAGATCACCAGTTGCCCCTGTGGCAAGTTGGCAGTGCCTCCGACGCAGCGCAGCAGCTGTCTGGATCCGGTGCCGACGTGCGAGGGCGCGTGTAGCAAGACGTTGCGCTGTGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAATGCCATTTGGGGCAGTGTCCGCCGTGCCCCAAACAGACGGCCGTCAAATGCCGTTGCGGCCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCAACCCGTGCGGACGATGCACGCTGCAAACGCCGTTGCACGAAGAAACGCAGCTGTGGCAAGCACAAATGCAACGCGGAATGTTGCATCGACATCGACCATGCCTGCCCGCTGCCCTGCAATCGAACGCTGAGCTGCGGCAAACACAAGTGCGACCAGCCCTGCCACCGGGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGCGCCGAAGTGATCTATCCACCGGTGCCGTGTGGCACCAAACGGCCGCCCTGCAAACGGCCCTGTTCACGCACCCACGGCTGCGAGCATGTACCGCAGCACAGTTGCCATGCGGCGGCCAGCTGCCCGCCGTGCATGATGTTCACCACGAAGTGGTGCCACGGCAATCACGAGCAGCGCAAGACGATACCCTGTTCGCAGGCCAGCTTCAGCTGTGGCTTTCCCTGCGCCAAGCCGCTCGCGTGTGGCCGCCATAAATGCATCCGGCCGTGCCATGAGGGCGAGTGTCCGCAGCAGCCGGGCGAGCTGTGCCGCCAGAGTTGCACCAAGCCGCGTCCGTTGTGCGGCCACAAGTGTGCCGCTGTCTGCCACGATGGCGCCTGCCCGGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAACTTGCCCGAGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAAATACTCGCAcccaccaaaaacaacaaatccaaCAAAACTTTGGACTGCAACGAGGAGTGTCGTCTGCTCGAGCGCAATCGCCGCTTGGCCATTGGACTGCAGTCTCGGAATCCGGAGTCGCAGCTGAAGTCGCTGACGAAGTACTCGGAATTCCTGCGCGGCTTTGCCAAACGCAATCCGGTGCTAACCAAGAGCGTCTACGAAACGCTCAGCGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCACGCAGTCATTCGTTCCCCACGATGAATCGCGAGAAGCGTCAAATGGTGCACGAGCTGTGCGAAGTGTTTGGCGTGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGCAACGTGGTCGCCACCGCGCACAAGGAACGCTGCTGGTTGCCCGCCACTAGCGTCATGGAGGTCCTGGCCCGCGAGTCCGGTCAGCGTCGCGTCCCGGTGCCCAGCAACAATGCCTGGGGCCTCAAGAAGTAG
- Protein Sequence
- MLQQYAAPVFGYQNGDAAGQHYPNLYSAFGSNPFAAPAAGGASFDFSASKLQATAPEFVPNFAKLSLSTSKANSSSSNSNNNNNNSNNSNTATIQHTPHEAASSNAQRGLAKPLAGGNNSRQQQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNSNDSAQPSPEKQLPHQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRSCGCGRTSKLMQCAMKQQLQCEATCDKPLNCAEHRCQQLCHAGKCEPCAEQVEQHCHCGKQQREVLCTKESQDRRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLAVPPTQRSSCLDPVPTCEGACSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHVPQHSCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGFPCAKPLACGRHKCIRPCHEGECPQQPGELCRQSCTKPRPLCGHKCAAVCHDGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPESQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00496269;
- 90% Identity
- iTF_00514573;
- 80% Identity
- -