Dpul010047.1
Basic Information
- Insect
- Drosophila pullipes
- Gene Symbol
- stc
- Assembly
- GCA_035043795.1
- Location
- JAWNMT010000644.1:218725-222538[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1.2e+04 -3.6 0.5 15 18 354 357 353 358 0.79 2 15 2 1.6e+04 -4.1 1.6 15 19 381 385 380 385 0.81 3 15 0.015 1.2e+02 2.7 2.5 4 11 414 421 413 422 0.91 4 15 5.8e-07 0.0047 16.8 15.1 1 19 426 443 426 443 0.93 5 15 2 1.6e+04 -4.2 1.4 6 10 469 473 468 473 0.87 6 15 2.4e-08 0.0002 21.2 11.4 1 18 479 496 479 497 0.96 7 15 2 1.6e+04 -6.3 3.9 7 13 501 507 501 508 0.74 8 15 2e-09 1.6e-05 24.7 12.9 1 19 537 555 537 555 0.98 9 15 2.4e-05 0.19 11.6 17.0 4 19 603 618 596 618 0.88 10 15 0.057 4.7e+02 0.8 11.6 1 11 658 668 658 680 0.79 11 15 4.7e-10 3.8e-06 26.7 15.5 1 18 685 702 685 703 0.97 12 15 1.4 1.2e+04 -3.6 1.5 6 10 732 736 731 737 0.61 13 15 2 1.6e+04 -5.8 9.5 9 18 749 759 739 760 0.79 14 15 2.7e-08 0.00022 21.0 12.6 1 16 796 811 796 819 0.95 15 15 8e-08 0.00065 19.5 12.5 1 19 829 848 829 848 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAAtattggcaacagcagcaacaacaacagcagctacaacagcagcagcagcagccgccaacgcagcaacagcagctaacaAATGGAGCAGCAGCTCATAATAACTCAGTCGCCGCTGCCTCTATCGCTGCCTCAGTCGCTGACTGCAATGGGcagagtaacaacaacaacaactatgtTAACTTCAATCAGTTCATCACGCAGCATAATTTACACAGCTCCAATCTTGGCtacagcagcggcggcggcggcgtcggcaGCGGCGGTGCCTTTGGCCTCACgcccgccagcagcagcggtagcGCTGCCAACAACTCCAGCTTTGGCGTCGGCCAATATGCGGCGCCTATTTTCGGCTACCAGAATGGCGATGGCGCTGGCCAAAATTGTCCCAATTTGAACTCAGCTTTTGGCAATAATCCATTTGCTGCGCCTGCTGCCGGCGGCACCGCTTTCGATTTTAGCGCTTCCAAGCTGCAGGCGACGGCACCCGAATTTGTGCCCAACTTCGCCAAGCTCAGCCTGTCGACGagcaaaaccaacagcagcagcagtaatagcaataataataataataatagcaacaacagcaacactgcCACAACACAGCAGACGCCACATgaggcagccagcagcaatgcTCAACGAGGTTTGGCGAAGCCGCTGGCTGGCGGCAATAATactcggcagcagcagcgacgccaggACTATCGCGAAGATCGCCACGAGGATCGCTATGAACGTGGCAAGAAGccgcagaagcagcagcgctATGACAATCATCGCAGCAACAAAAGACGCGACGACTGGAATCGCAATCGTGATCGCATCAATGGCTATCCGCGCGCCGCCGACGAACTggacaccagcaacagcaacgacagtGCGCAGCCCTCGCCCGAGAAGCAACTGCCACACCAAGTCTCCCCTCGCCGAGCGCCCGACAATGAGAAGCTGTCGCAGCGGGAGAAGCTGATGCGCGACATCGAGCAACGTCGACTGGAGTGCTTAGTGTGCGTGGAGCAGATCAAGGCGCATCATGGCACATGGTCGTGCCAGAACTGCTATCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCTAGCAGTTCCAAGTCGGCGGAGGGCTGGCGCTGTCCAGCCTGCCAGAATGTGCTGCAAGAGTTGCCGCGCGAATATCTCTGCTTCTGTGGCAAGCTGAAGAATCCGCCGCTCACACGTAACGAGCTGGCGCATACTTGCGGCGAACTCTGCTGTCGCGTCGAGGGCTGCAGTCATGCGTGCACCCTGCTCTGTCATCCGGGCCCGTGTCCGCCGTGCCAGGCGAACGTGTTGCGCAGCTGTGGCTGCGGACGCACTTCCAAGCTGATGCAGTGCGCCAtgaagcagcaactgcagtgCGAGGCCACCTGCGACAAGCCACTCAACTGCGCCGAGCATCGTTGCCAGCAGTTGTGCCATGCGGGCAAATGTGAGCCGTGTGCGGAACAGGTGGAGCAACACTGCCactgtggcaagcagcagcgcGAGGTGCTCTGCACCAAGGAGAGTCAGGATAGGCGCAGCTATTCGTGCAAGGAGTGTTGCGGCAAGCCGTTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGCCACGCCGGCGCGTGTCGTCCCTGCAAGCTGAGTCCGCAGCAGATCACCAGTTGCCCCTGTGGCAAGTTGGCAGTGCCTCCGACGCAGCGCAGCAGCTGTCTGGACCCGGTGCCGACGTGCGAGGGCGCGTGTAGCAAGACGCTGCGCTGTGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAATGCCATTTGGGGCAGTGTCCGCCGTGCCCCAAACAGACGGCCGTCAAATGCCGTTGCGGCCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCGACCCGGGCGGACGATGCACGCTGCAAGCGCCGTTGCACGAAGAAACGCAGCTGTGGAAAGCACAAATGCAACGCGGAATGTTGCATCGACATCGACCATGCCTGCCCGCTGCCCTGCAACCGAACACTGAGCTGCGGCAAACACAAGTGCGACCAGCCCTGCCATCGGGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGTGAGTGCGGCGCCGAAGTGATATATCCACCGGTGCCGTGTGGCACCAAACGGCCGCCCTGCAAACGGCCCTGTTCGCGCACCCACGGCTGCGAGCATGTGCCGCAGCACAGTTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAATCACGAGCAGCGCAAGACGATACCCTGCTCGCAGGCCAGCTTCAGCTGTGGCTTTCCCTGCGCCAAGCCGCTCGCGTGTGGCCGCCATAAATGCATCCGGCCGTGCCACGAGGGCGAGTGTCCGCAGCAGCCGGGCGAGCTGTGCCGTCAGAGCTGCACCAAGCCTCGTCTGTTGTGCGGCCACAAGTGTGCCGCTGTCTGCCACGATGGCGCCTGTCCAGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAATGCGGCAATCGCAAGCAAAGCCGCAGCTGCCAGGAACTTGCCCGGGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAATTACATGGAGCTAAGCGAAATACTTGCACccatcaaaaacaacaaatccaaCAAAACTTTGGACTGCAATGAGGAGTGTCGTCTGCTGGAGCGCAATCGTCGCTTGGCCATTGGACTGCAGTCTCGGAATCCGGAGTCGCAACTAAAGTCGCTGACGAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGTGCTAACCAAGAGCGTCTACGAAACGCTCAGCGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCGCGCAGTCACTCGTTCCCCACGATGAATCGCGAGAAGCGTCAAATGGTGCATGAGCTGTGCGAAGTGTTTGGCGTGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGAAACGTGGTCGCCACCGCGCACAAGGAACGCTGCTGGTTGCCCGCCACTAGCGTCATGGAGGTCCTGGCCCGCGAATCCGGTCAGCGTCGCGTCCCGGTGCCCAGCAACAATGTCTGGGGAATCAAGAAGTAG
- Protein Sequence
- MAEYWQQQQQQQQLQQQQQQPPTQQQQLTNGAAAHNNSVAAASIAASVADCNGQSNNNNNYVNFNQFITQHNLHSSNLGYSSGGGGVGSGGAFGLTPASSSGSAANNSSFGVGQYAAPIFGYQNGDGAGQNCPNLNSAFGNNPFAAPAAGGTAFDFSASKLQATAPEFVPNFAKLSLSTSKTNSSSSNSNNNNNNSNNSNTATTQQTPHEAASSNAQRGLAKPLAGGNNTRQQQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNSNDSAQPSPEKQLPHQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRSCGCGRTSKLMQCAMKQQLQCEATCDKPLNCAEHRCQQLCHAGKCEPCAEQVEQHCHCGKQQREVLCTKESQDRRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLAVPPTQRSSCLDPVPTCEGACSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHVPQHSCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGFPCAKPLACGRHKCIRPCHEGECPQQPGELCRQSCTKPRLLCGHKCAAVCHDGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPIKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPESQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNVWGIKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00496269;
- 90% Identity
- iTF_00607498;
- 80% Identity
- -