Basic Information

Insect: Drosophila infuscata
Gene Symbol: stc
Assembly: GCA_035042205.1
Location: JAWNLR010000677.1:117220-121272[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4 1.4e+04 -3.6 0.5 15 18 350 353 349 354 0.79

2 16 2 1.9e+04 -4.1 1.6 15 19 377 381 376 381 0.81

3 16 0.015 1.4e+02 2.7 2.5 4 11 410 417 409 418 0.91

4 16 5.8e-07 0.0056 16.8 15.1 1 19 422 439 422 439 0.93

5 16 0.057 5.6e+02 0.8 1.8 6 12 465 471 464 471 0.89

6 16 2.6e-07 0.0026 17.9 10.5 1 18 475 492 475 493 0.96

7 16 2 1.9e+04 -6.2 3.9 7 13 497 503 497 504 0.74

8 16 2e-09 1.9e-05 24.7 12.9 1 19 533 551 533 551 0.98

9 16 1.1 1.1e+04 -3.3 0.5 5 10 581 586 581 586 0.90

10 16 2.3e-05 0.23 11.6 17.0 4 19 599 614 592 614 0.88

11 16 0.057 5.6e+02 0.8 11.6 1 11 654 664 654 676 0.79

12 16 4.7e-10 4.6e-06 26.7 15.5 1 18 681 698 681 699 0.97

13 16 1.4 1.4e+04 -3.6 1.5 6 10 728 732 727 733 0.61

14 16 2 1.9e+04 -5.8 9.5 9 18 745 755 735 756 0.79

15 16 2.7e-08 0.00026 21.1 12.6 1 16 792 807 792 815 0.95

16 16 1.2e-07 0.0012 19.0 13.0 1 19 825 844 825 844 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4	1.4e+04	-3.6	0.5	15	18	350	353	349	354	0.79
2	16	2	1.9e+04	-4.1	1.6	15	19	377	381	376	381	0.81
3	16	0.015	1.4e+02	2.7	2.5	4	11	410	417	409	418	0.91
4	16	5.8e-07	0.0056	16.8	15.1	1	19	422	439	422	439	0.93
5	16	0.057	5.6e+02	0.8	1.8	6	12	465	471	464	471	0.89
6	16	2.6e-07	0.0026	17.9	10.5	1	18	475	492	475	493	0.96
7	16	2	1.9e+04	-6.2	3.9	7	13	497	503	497	504	0.74
8	16	2e-09	1.9e-05	24.7	12.9	1	19	533	551	533	551	0.98
9	16	1.1	1.1e+04	-3.3	0.5	5	10	581	586	581	586	0.90
10	16	2.3e-05	0.23	11.6	17.0	4	19	599	614	592	614	0.88
11	16	0.057	5.6e+02	0.8	11.6	1	11	654	664	654	676	0.79
12	16	4.7e-10	4.6e-06	26.7	15.5	1	18	681	698	681	699	0.97
13	16	1.4	1.4e+04	-3.6	1.5	6	10	728	732	727	733	0.61
14	16	2	1.9e+04	-5.8	9.5	9	18	745	755	735	756	0.79
15	16	2.7e-08	0.00026	21.1	12.6	1	16	792	807	792	815	0.95
16	16	1.2e-07	0.0012	19.0	13.0	1	19	825	844	825	844	0.96

Sequence Information

Coding Sequence: ATGGCCGAAtattggcaacagcagcaacaacaacagcagcagcagccgccaacacagcaacagcagctaacaAATGGAGCAGCAGCTCATAATGACTCAGTCGTCGCTGGTTCtatcgctgccgctgcctccGTCGCTGACTGCAATGGGcagagtaacaacaacaacaactatgtTAACTTCAATCAGTTCATCACGCAGCATAATTTACACAGCTCCAATCTCGGCTATAgcagcggcggtggcggcgtcGGCAGCGGCGGAGCATTTGGTCTGACGCCCGCtagctgcagcggcagcgctGCCAACAACTCCTCCAGCTTTGACGTCGGCCAATATGCGGCGCCTGTTTTTGGCTATCAGAATGGCGATAGCGTTGGCCAACATTATCCCAATTTGTACTCAGCCTTTGGCAATAATCCATTTGCTGCGCCTGCTGCCGGCGGCGCATCTTTCGATTTTAGTGCTTCCAAGCTGCAGGCAACGGCGCCCGAATTTGTGCCCAACTTCGCCAAGCTCAGCCTGTCGACGAGTAAAGccaacggcagcagcaccaatagcaataataataatagcaacaacagcaacactgcCACAACACAGCACACGCCACATgaggcagccagcagcaatgCTCAACGAGGCATGGCGAAGCCGCTGGTTGGAGGCAATAATactcggcagcagcagcgacgccaggACTATCGTGAGGATCGCCACGAGGATCGCTATGAGCGTGGCAAGAAGccacagaagcagcagcgctACGACAATCATCGCAGCAACAAAAGACGCGACGACTGGAATCGCAATCGTGATCGCATCAATGGCTACCCGCGCGCCGCCGACGAACTGgacacaagcaacagcaacgacagcgCCCAGCCCTCGCCCGAGAAGCAGCTGCCAAACCAACTGTCCCCTCGCCGTGCACCCGACAATGAGAAGCTGTCACAGCGGGAGAAGCTGATGCGCGACATCGAGCAGCGACGACTGGAGTGCTTGGTGTGCGTGGAGCAGATCAAGGCGCATCATGGCACGTGGTCGTGCCAGAACTGTTATCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCGAGCAGTTCCAAGTCGGCGGAAGGCTGGCGCTGTCCAGCCTGCCAGAATGTGCTGCAAGAACTGCCGCGCGAGTATCTCTGCTTCTGTGGCAAGCTTAAGAATCCGCCGCTCACACGCAACGAGCTGGCGCACACTTGCGGCGAACTCTGCTGCCGCGTCGAGGGCTGTAGTCATGCGTGCACCCTGCTCTGTCATCCGGGTCCGTGTCCGCCGTGCCAGGCGAACGTGTTGCGCAGCTGTGGCTGCGGACGCACCTCCAAGATGATGCAGTGCGCCATGAAGCAACCACTGCAGTGTGAGGCCGCCTGCCACAAGGCACTCAACTGCGCCGAGCATCTTTGCCAGCAGTTGTGCCATGCGGGCAAATGTGAGCCGTGTGCAGAGCAGGTGGAGCAACACTGCCactgtggcaagcagcagcgCGAGGTGCTCTGCACCAAGGAGAGTCAGGACAGGCGCAGTTACTCGTGCAAGGAGTGCTGTGGCAAGCCGTTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGCCACGCCGGCGCCTGTCGTCCCTGCAAGCTAAGTCCGCAGCAGATCACCAGTTGCCCCTGTGGCAAGTTGGCTGTGCCTCCGACGCAGCGCAGCAGCTGCCTAGATCCGGTGCCGACGTGCGAGGGCGTGTGTAGCAAGACGCTGCGCTGTGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAATGCCATTTGGGGCAGTGTCCGCCGTGCCCCAAACAGACGGCCGTCAAATGCCGTTGCGGCCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCGACCCGGGCGGACGATGCACGCTGCAAGCGCCGTTGCACGAAGAAACGCAGCTGtggcaaacacaaatgcaaCGCGGAATGTTGCATCGACATCGACCATGCCTGCCCGCTGCCCTGCAACCGAACGCTGAGCTGCGGCAAACACAAGTGCGATCAGCCCTGCCATCGCGGCAATTGTCCGCCCTGCTACCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGCGCCGAAGTGATCTATCCACCGGTGCCGTGTGGCACAAAGCGTCCCCCCTGCAAGCGTCCCTGTTCGCGCACCCACGGCTGCGAGCATGTGCCGCAGCACAGTTGCCATGCGGCGGCTAGCTGCCCGCCCTGCATGATGTTTACCACAAAGTGGTGCCACGGCAATCACGAGCAGCGCAAGACGATTCCCTGCTCGCAGTCTAGCTTCAGCTGTGGCTTCCCCTGCGCCAAGCCGCTCGCTTGTGGCCGCCATAAATGCATCCGGCCGTGCCACGAGGGCGAGTGCCCACAGCAGCCGGGCGAGCTCTGCCGCCAGAGCTGCACCAAGCCACGTCTGTTGTGCGGCCACAAGTGTGCTGCCGTGTGCCACGATGGCTCCTGTCCGGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAACTTGCCCGGGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAAATGTCGCGCGGCAACTACATGGAGCTCAGCGAAATATTCGCAcccaccaaaaacaacaaatccaaTAAAACCTTGGACTGCAATGAGGAGTGCCGCTTGCTGGAGCGCAATCGCCGCTTGGCCATTGGACTGCAGTCACGAAATCCGGAGTCGCAGCTCAAGTCGCTGACGAAGTACTCGGAATTCTTGCGCGGCTTTGCTAAACGCAATCCGGTGCTAACCAAGAGCGTCTACGAGACGCTCAGCGATCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCACGCAGTCACTCGTTCCCCACAATGAATCGAGAGAAGCGTCAAATGGTGCACGAACTGTGCGAAGTGTTTGGAGTCGAGTCCGTCTCATATGACAAGGAGCCCAATCGCAATGTGGTCGCCACCGCGCACAAGGAACGCtGCTGGTTGCCCGCCACTAGCGTTATGGAGGTCCTGGCCCGCGAGTCCGGTCAGCGTCGCGTTCCGGTGCCCAGCAACAATGCCTGGGGCCTCAAGAAGTAG
Protein Sequence: MAEYWQQQQQQQQQQPPTQQQQLTNGAAAHNDSVVAGSIAAAASVADCNGQSNNNNNYVNFNQFITQHNLHSSNLGYSSGGGGVGSGGAFGLTPASCSGSAANNSSSFDVGQYAAPVFGYQNGDSVGQHYPNLYSAFGNNPFAAPAAGGASFDFSASKLQATAPEFVPNFAKLSLSTSKANGSSTNSNNNNSNNSNTATTQHTPHEAASSNAQRGMAKPLVGGNNTRQQQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNSNDSAQPSPEKQLPNQLSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRSCGCGRTSKMMQCAMKQPLQCEAACHKALNCAEHLCQQLCHAGKCEPCAEQVEQHCHCGKQQREVLCTKESQDRRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLAVPPTQRSSCLDPVPTCEGVCSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHVPQHSCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQSSFSCGFPCAKPLACGRHKCIRPCHEGECPQQPGELCRQSCTKPRLLCGHKCAAVCHDGSCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEIFAPTKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPESQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00496269;
90% Identity: iTF_00607498;
80% Identity: -