Basic Information

Insect: Drosophila basisetae
Gene Symbol: stc
Assembly: GCA_035041595.1
Location: JAWNLB010000116.1:4388497-4392355[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4 1.2e+04 -3.6 0.5 15 18 358 361 357 362 0.79

2 16 2 1.6e+04 -4.1 1.6 15 19 385 389 384 389 0.81

3 16 0.015 1.2e+02 2.7 2.5 4 11 418 425 417 426 0.91

4 16 5.8e-07 0.0047 16.8 15.1 1 19 430 447 430 447 0.93

5 16 2 1.6e+04 -4.2 1.4 6 10 473 477 472 477 0.87

6 16 2.4e-08 0.00019 21.2 11.4 1 18 483 500 483 501 0.96

7 16 2 1.6e+04 -6.3 3.9 7 13 505 511 505 512 0.74

8 16 2e-09 1.6e-05 24.6 12.9 1 19 541 559 541 559 0.98

9 16 2 1.6e+04 -5.4 1.3 11 16 590 595 590 595 0.67

10 16 2.4e-05 0.19 11.6 17.0 4 19 607 622 600 622 0.88

11 16 0.062 5e+02 0.7 11.7 1 11 662 672 662 684 0.79

12 16 4.7e-10 3.8e-06 26.6 15.5 1 18 689 706 689 707 0.97

13 16 1.4 1.1e+04 -3.6 1.5 6 10 736 740 735 741 0.61

14 16 2 1.6e+04 -7.0 9.6 9 18 753 763 744 764 0.78

15 16 7e-08 0.00057 19.7 11.9 1 16 800 815 800 823 0.95

16 16 5.7e-08 0.00046 20.0 12.0 1 19 833 852 833 852 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4	1.2e+04	-3.6	0.5	15	18	358	361	357	362	0.79
2	16	2	1.6e+04	-4.1	1.6	15	19	385	389	384	389	0.81
3	16	0.015	1.2e+02	2.7	2.5	4	11	418	425	417	426	0.91
4	16	5.8e-07	0.0047	16.8	15.1	1	19	430	447	430	447	0.93
5	16	2	1.6e+04	-4.2	1.4	6	10	473	477	472	477	0.87
6	16	2.4e-08	0.00019	21.2	11.4	1	18	483	500	483	501	0.96
7	16	2	1.6e+04	-6.3	3.9	7	13	505	511	505	512	0.74
8	16	2e-09	1.6e-05	24.6	12.9	1	19	541	559	541	559	0.98
9	16	2	1.6e+04	-5.4	1.3	11	16	590	595	590	595	0.67
10	16	2.4e-05	0.19	11.6	17.0	4	19	607	622	600	622	0.88
11	16	0.062	5e+02	0.7	11.7	1	11	662	672	662	684	0.79
12	16	4.7e-10	3.8e-06	26.6	15.5	1	18	689	706	689	707	0.97
13	16	1.4	1.1e+04	-3.6	1.5	6	10	736	740	735	741	0.61
14	16	2	1.6e+04	-7.0	9.6	9	18	753	763	744	764	0.78
15	16	7e-08	0.00057	19.7	11.9	1	16	800	815	800	823	0.95
16	16	5.7e-08	0.00046	20.0	12.0	1	19	833	852	833	852	0.97

Sequence Information

Coding Sequence: ATGGCCGAAAAttggaaacagcagcaacaacaacagcagctacaacagcagcagcagcagccgccaacgcagcaacatcagctaacaaatggagcagcagctcatAATGACTCAGTCGCCGCTGCCTCTATCGCTGACGCTGCCTCAGTTGCTGCCTGTAATGGGCcgagtaacaacaacaacaactatgttAACTTCAATCAGTTCATCACGCAGCATAATTTACACAGCTCCAATCTCGGCTACAgcagtggcggcggcggcggcgtcggctGCGGCGGTGCCTTTGGCCTGACgcccgccagcagcagcggtagcGCTGCCAACAACTCCAGCTTTGGCCAATATGCGCCGCCTATTTTCGACCACCTGATTGGCGACGACGCTGGCCAAAATTATCCCAGTTTGCACTCGGCTCTTGGCAATAATCCATTTGCTGCGCGTGCTGCCGGCCGCGCCTTTTTCGATTTTAGCGCTTCCAAGCTGCAGGCGACGGCACCCGAATTTGTGCCCAACTTCGCCAAGCTCAGCCTGTCGACGagcaaaaccaacagcagcagcagtaatagcaataataataataatagcaacaacagcaacactgcCACAACACAGCACACGCCACATGAGGCAGCTAGCAGCAATGCTCAACGAGGCTTGGCGAAACCGCTGGCGGGCGGCAATAATACTCGGCAGAATCAGCGACGCCAGGACTATCGCGAAGATCGCCACGAGGATCGCTATGAGCGTGGCAAGAAgccgcagaagcagcagcgctaTGACAATCATCGCAGCAACAAAAGACGCGACGACTGGAATCGCAATCGTGATCGCATCAATGGCTATGCGCGCGCCGCCGACGAACTGGataccagcaacagcaacgacagtGCGCAGCCCTCGCCCGAGAAGCAGCCCGAGAAGCAACTGCCACACCAAGTCTCCCCTCGCCGAGCGCCCGACAATGAGAAGCTGTCGCAGCGGGAGAAGCTGATGCGCGACATCGAGCAGCGTCGACTGGAGTGCTTAGTGTGCGTGGAGCAGATCAAGGCGCATCATGGCACATGGTCTTGCCAGAACTGCTATCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCGAGCAGTTCCAAGTCGGCGGAGGGCTGGCGCTGTCCAGCCTGCCAGAATGTGCTGCAAGAGTTGCCGCGCGAATATCTCTGCTTCTGTGGCAAGCTGAAGAATCCGCCGCTCACACGTAACGAGCTGGCGCACACTTGCGGCGAACTGTGCTGTCGCGTCGAGGGCTGTAGTCATGCATGCACCCTGCTCTGTCATCCGGGCCCGTGTCCGCCGTGCCAGGCGAACGTGTTGCGCAGCTGTGGCTGCGGACGCACCTCCAAGCTGATGCAGTGCGCCAtgaagcagcaactgcagtgCGAGGCCACCTGCGACAAGCCACTCAACTGCGCCGAGCATCGTTGCCAGCAGTTGTGCCATGCGGGCAAATGTGAGCCGTGTGCGGAACAGGTGGAGCAACACTGCCactgtggcaagcagcagcgcGAGGTGCTCTGCACCAAGGAGAGTCAGGATAGGCGCAGCTATTCGTGCAAGGAGTGCTGCGGCAAGCCGTTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGCCACGCCGGCGCCTGTCGTCCGTGCAAGCTGAGTCCGCAGCAGATCACCAGTTGCCCCTGTGGCAAGTTGGCAGTGCCTCCGACGCAGCGCAGCAGCTGTCTGGATCCGGTGCCGACGTGCGAGGGCGCGTGTGGCAAGACGCTGCGCTGTGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAATGCCATTTGGGGCAGTGTCCGCCGTGCCCCAAACAGACGGCCGTCAAATGCCGTTGCGGCCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCGACCCGTGCGGACGATGCACGCTGCAAGCGCCGTTGCACGAAGAAACGCAGCTGTGGAAAGCACAAATGCAACGCGGAGTGTTGCATCGACATCGATCATGCCTGCCCGCTGCCCTGCAACCGAACGCTGAGCTGCGGCAAACACAAGTGCGATCAGCCATGCCATCGGGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGTGAGTGCGGCGCCGAAATGATCTTTCCACCGGTGCCGTGTGGCACCAAACGGCCGCCCTGCAAACGGCCCTGTTCGCGCGCCCACGGCTGCGAGCATGTGCCGCAGCACAGTTGCCATGCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAATCACGAGCAGCGCAAGACGATACCTTGCTCGCAGGGCAGCTTCAGCTGTGGCTTTCCCTGCGCCAAGCCGCTCGCGTGTGGCCGCCATAAATGCATCCGGTCGTGCCACGAGGGCGAGTGTCCGCAGCAGCCGGGCGAGCTGTGCCGCCAGAGCTGCACCAAGCCTCGTCTGTCGTGCGGCCACAAGTGTGCCGCTGTCTGCCACGATGGCGCCTGTCCAGATACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGTCGCAGCTGCCAGGAACTCGCCCGGGAGCACAGTCGCATTGCCACGGCCCAGCTGGCCTCCTCTATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAAATACTCGCAcccaccaaaaacaacaaatccaacaaaaCTTTGGACTGCAACGAGGAGTGTCGTCTGCTGGAACGCAATCGCCGATTGGCCATTGGACTGCAGACTCGGAATCCGGAGTCGCAGCTGAAGTCGTTGACGAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGTGCTGACTAAGAGCGTCTACGAAACGCTCAGCGACCTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCGCGCAGTCACTCGTTCCCCACGATGAATCGCGAGAAGCGTCAAATGGTGCACGAGCTGTGCGAAGTGTTTGGCGTGGAGTCCGTTTCCTATGACAAGGAGCCCAATCGCAACGTGGTCGCCACCGCGCACAAGGAACGCTGCTGGTTGCCCGCCACTAGCGTCATGGAGGTCCTGGCCCGCGAGTCTGGTCAGCGTCGCGTCCCGGTGCCCAGCAACAATGCCTGGGGAATCAAGAAGTAG
Protein Sequence: MAENWKQQQQQQQLQQQQQQPPTQQHQLTNGAAAHNDSVAAASIADAASVAACNGPSNNNNNYVNFNQFITQHNLHSSNLGYSSGGGGGVGCGGAFGLTPASSSGSAANNSSFGQYAPPIFDHLIGDDAGQNYPSLHSALGNNPFAARAAGRAFFDFSASKLQATAPEFVPNFAKLSLSTSKTNSSSSNSNNNNNSNNSNTATTQHTPHEAASSNAQRGLAKPLAGGNNTRQNQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYARAADELDTSNSNDSAQPSPEKQPEKQLPHQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVLRSCGCGRTSKLMQCAMKQQLQCEATCDKPLNCAEHRCQQLCHAGKCEPCAEQVEQHCHCGKQQREVLCTKESQDRRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLAVPPTQRSSCLDPVPTCEGACGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEMIFPPVPCGTKRPPCKRPCSRAHGCEHVPQHSCHAAATCPPCMMFTTKWCHGNHEQRKTIPCSQGSFSCGFPCAKPLACGRHKCIRSCHEGECPQQPGELCRQSCTKPRLSCGHKCAAVCHDGACPDTPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKNNKSNKTLDCNEECRLLERNRRLAIGLQTRNPESQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGIKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00496269;
90% Identity: iTF_00607498;
80% Identity: -