Xsyl006950.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xylota sylvarum
Gene Symbol
stc
Assembly
GCA_905220385.1
Location
LR999957.1:96048690-96051901[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 1.9 2.6e+04 -4.0 1.6 15 19 330 334 329 334 0.81
2 14 0.055 7.5e+02 0.9 0.2 4 10 363 369 362 370 0.95
3 14 5.5e-07 0.0075 16.9 15.1 1 19 375 392 375 392 0.93
4 14 2 2.7e+04 -4.6 1.4 6 10 418 422 417 422 0.87
5 14 6.5e-06 0.09 13.4 12.1 3 18 430 445 428 446 0.91
6 14 0.77 1.1e+04 -2.8 1.4 8 13 451 456 450 457 0.79
7 14 0.0001 1.4 9.6 20.6 1 19 486 504 476 504 0.85
8 14 0.0072 99 3.7 15.2 4 18 552 566 545 567 0.86
9 14 0.045 6.2e+02 1.2 12.3 1 11 607 617 607 629 0.91
10 14 4.5e-10 6.1e-06 26.7 15.5 1 18 634 651 634 652 0.97
11 14 1 1.4e+04 -3.2 1.3 6 10 681 685 679 687 0.65
12 14 2 2.7e+04 -6.0 10.2 10 18 699 708 688 709 0.78
13 14 5.3e-09 7.3e-05 23.3 11.9 1 16 745 760 745 767 0.87
14 14 1e-07 0.0014 19.2 10.6 1 18 777 795 777 796 0.89

Sequence Information

Coding Sequence
ATGTCAGACGCGTTCCATCGATATCACGAAGGAGCAGGAGGcagtggcagcagcagcagtaccaGCACCAACAATAATTATGTGAACTTCAATCAGTTTATGATGCAGCACAACATCATTGGAGGCGGTGCGAATAGTGCGGTAGGTGACGGCGGAGTCGATGCAGTGACTGCGTCCTCAACCAACCCCTTCCATTACAATGGTGGTTATGGGCATCAGTATCAAATGGATGACTACTACTGCGGCGGAAGTGGTGGCGGTGGACTGTACAACTACCAACCAAGATATAATTACACAAATTCGACGCTACATGCTACTGCAGCTGAGTTTGTTCCGAGATTCTCCAACTTATCGCTGGGCGAGGTTGCCATGAGCGCAGTTAAATCAAATGACGTGGCATCCGCAGTGACTTCCATCGCAGCTGACATTCAAAATGCAAACACCAACGGAGTTTGTGGTCCTTCCACCAGCAAAGCCGGACCACATCAGAATAGcgcagattcaccacgaaataAGTCGCCGCCGCAGCGTTACACTGGTGCAATGAGCAAGAGTCGCGATTCAACGTCACGTGGTGGCGTCGGTGTTGGTGGATCATCTTCACGTCGACAGAATGGTCGAGATTATCACCGGAATCAACGGTATGACAACCACCGGAGTAACAAGCGCAGAGACGACTGGAACAGGAACCGTGATCGGGTGAATGCTTTCAGGGAAGAGAAGTACACCTTGGATAATGGAAAAGATAGTCCGCTTAATTCGCCTGAGAAAAAGTCGCCTAAGAAACCGCATCCTGATAATGAAAAACTGTCGCAGAGGGAGAAACTCATCCGAGAAATTGAAGCACGCCGCCTGGAGTGTCTTGTGTGCGTGGAGCCAATCAAGAGTCACAATTCGGTCTGGTCCTGTCACAATTGCTATCATATTCTTCACCTTAACTGTATCATTAAGTGGGCATCTAGTTCCAAGTCTCAGGACGGCTGGCGTTGTCCTGCATGTCAAAACGTTGAGAAAGACGTGCCACGCGACTACTATTGCTTCTGTGGTAAGGTGAAAAGCCCACAGTTCAACCGCAACGACATCGCACACAGCTGTGGAGAAGTTTGTGGTCGTATCGAGGGATGCTCGCACGCCTGCACTCTCTTATGCCACCCCGGACCATGTCCACCGTGTCAAGCCAACGTTACACGGGAGTGTGGATGCGGTAAGACCACCAAGACCATGCAGTGCTATTTGAAAGAGTCCATCGAGTGTGAAGCCAAGTGTCAGAAGCTACTCAACTGCGAACTGCACTTGTGCGAGGACAAATGCCACGAAGGCAAGTGTAAGCCCTGTGAACAGAAGGTTGATCAGAAGTGTCACTGCGGGAAGCAGGATCGTCAGGTAGCTTGCACAAGAGATTCCCACGAGAAGAAGACTTATTCGTGTGGCAAACCTTGTGGAAGAGATCTGAGTTGCGAGAATCACAAGTGTAAGGATTGTTGTCACGCTGGAGAATGTCGACCGTGCAAATTTAGCCCAGAAATGGTCACTTCATGTCCCTGCGGCAAAATGCCGGTAGTTTTGGAGCAGAGGAAATCTTGTCTGGACCCGATTCCTGTCTGCGATGGCATCTGTAACAAGACACTGCGATGTGGCAAAGCAGCCCATCCTCATCATTGCACAAGTAAATGCCATCTTGCGAATTGTCCACCGTGCAACAAGCAAACAGCTGTTAAGTGCAGATGTGGCCACATGGACCAGATGATAAAATGCCGCCAGCTGTCGACAAGAGCTGACGATGCACGCTGTAAGAAGCGCTGCGTAAAGAAACGTTCGTGTGGCAAACACAAATGTAACCAAGAGTGTTGCATAGACATTGACCACATCTGCCCGATGCCCTGCAACTATACTCTCTCATGTGGCAAGCACAAGTGCGACCAACCATGCCATCGAGGTAATTGTCCTCCATGCTACCGCAGCTCATTTGAGGAATTGTACTGCGAGTGTGGAGCGGAGGTGATCTACCCGCCAGTACCCTGCGGCACTAAGAGGCCGCCTTGCAAGCGGCCATGTTCCCGCCAACACCCTTGTGACCATCCAGTTCAACACAATTGCCACTCTGCAGCCAATTGTCCACCCTGTATGATGTTCACCACGAAATGGTGCTTTGGGCAACACGAACAGAGAAAAACCATTCCATGCAGTCAGGAGAGCTTCAGCTGCGGCCTGGCGTGCAACAAGCCGCTAACATGTGGGCGTCACAAGTGCATCAAGCCTTGTCATGAAGGTCCATGCCAGGCAGTGGGCGAGGTCTGTAAGCAGAATTGTACAACCGTACGAGGTGGGTGTGGACATAAGTGTATGGCAGTTTGCCATGATGGGGACTGCCCCGAGACGGCATGCAAGGAAATGGTGGAGGTGACTTGCGAGTGCGGTAATCGAAAGCAGATGCGAGCTTGCTATGACTTTGCTCGGGAATATCGCCGAATCGCCACAGCACAATTGGCCTCCTCTATGGCTGAGGTTCAACGCGGTAATACAATCGAACTAAGTGACATCCTGGGACCAGTCAAGATGAACAACAACAAAGCCCTTGAATGCAACGATGAATGCCGAACGTTAGAGCGTAATCGCCGTCTTGCTATTGGTCTGCAAATCCGTAATCCCGATCTGCCACAGAAGCTACTTACCAAATATTCCGATTTTATCCGAGGCTATGCGAAGAAGGACCCGGTTCTTGTCAAAAGCATTCACGACTCCCTAACCAATTTGGTCAAACTGGCCAAAGAGAGCAAGCAAAAATCTCGCAGTCACTCATTCCCCACGATGAATCGTGAGAAACGCCAACTCGTACATGAAATGTGTGAAATGTTCGGAGTCGAATCGGTGGCTTACGATGCGGAGCCCAATCGGAATGTTGTCGCAACGGCTTACAAGGAAAAGTCTTGGTTACCAGCTCAAAGTATCATGGAAGTCATACAACGCGAAAGTGGACAACGACGCGTTCCGGTGCCAAGTAACAATGCATGGGGTATCAAGAGATAG
Protein Sequence
MSDAFHRYHEGAGGSGSSSSTSTNNNYVNFNQFMMQHNIIGGGANSAVGDGGVDAVTASSTNPFHYNGGYGHQYQMDDYYCGGSGGGGLYNYQPRYNYTNSTLHATAAEFVPRFSNLSLGEVAMSAVKSNDVASAVTSIAADIQNANTNGVCGPSTSKAGPHQNSADSPRNKSPPQRYTGAMSKSRDSTSRGGVGVGGSSSRRQNGRDYHRNQRYDNHRSNKRRDDWNRNRDRVNAFREEKYTLDNGKDSPLNSPEKKSPKKPHPDNEKLSQREKLIREIEARRLECLVCVEPIKSHNSVWSCHNCYHILHLNCIIKWASSSKSQDGWRCPACQNVEKDVPRDYYCFCGKVKSPQFNRNDIAHSCGEVCGRIEGCSHACTLLCHPGPCPPCQANVTRECGCGKTTKTMQCYLKESIECEAKCQKLLNCELHLCEDKCHEGKCKPCEQKVDQKCHCGKQDRQVACTRDSHEKKTYSCGKPCGRDLSCENHKCKDCCHAGECRPCKFSPEMVTSCPCGKMPVVLEQRKSCLDPIPVCDGICNKTLRCGKAAHPHHCTSKCHLANCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPMPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRQHPCDHPVQHNCHSAANCPPCMMFTTKWCFGQHEQRKTIPCSQESFSCGLACNKPLTCGRHKCIKPCHEGPCQAVGEVCKQNCTTVRGGCGHKCMAVCHDGDCPETACKEMVEVTCECGNRKQMRACYDFAREYRRIATAQLASSMAEVQRGNTIELSDILGPVKMNNNKALECNDECRTLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRGYAKKDPVLVKSIHDSLTNLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKEKSWLPAQSIMEVIQRESGQRRVPVPSNNAWGIKR*