Basic Information

Insect: Criorhina ranunculi
Gene Symbol: stc
Assembly: GCA_951813785.1
Location: OX638384.1:58094316-58097517[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.9 2.1e+04 -4.0 1.6 15 19 331 335 330 335 0.81

2 13 0.055 6.1e+02 0.9 0.2 4 10 364 370 363 371 0.95

3 13 5.5e-07 0.0062 16.9 15.1 1 19 376 393 376 393 0.93

4 13 3.1e-06 0.034 14.5 11.9 3 18 431 446 429 447 0.91

5 13 1.2 1.4e+04 -3.4 2.5 7 13 451 457 448 458 0.77

6 13 0.0001 1.1 9.6 20.6 1 19 487 505 477 505 0.85

7 13 5.6e-05 0.63 10.4 16.3 4 18 553 567 546 568 0.86

8 13 0.056 6.2e+02 0.9 12.7 1 11 608 618 608 630 0.89

9 13 4.5e-10 5e-06 26.7 15.5 1 18 635 652 635 653 0.97

10 13 1 1.1e+04 -3.2 1.3 6 10 682 686 680 688 0.65

11 13 2 2.2e+04 -6.5 10.4 10 18 700 709 689 710 0.78

12 13 3.7e-08 0.00042 20.6 14.6 1 17 746 762 746 771 0.93

13 13 1e-07 0.0011 19.2 10.6 1 18 778 796 778 797 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.9	2.1e+04	-4.0	1.6	15	19	331	335	330	335	0.81
2	13	0.055	6.1e+02	0.9	0.2	4	10	364	370	363	371	0.95
3	13	5.5e-07	0.0062	16.9	15.1	1	19	376	393	376	393	0.93
4	13	3.1e-06	0.034	14.5	11.9	3	18	431	446	429	447	0.91
5	13	1.2	1.4e+04	-3.4	2.5	7	13	451	457	448	458	0.77
6	13	0.0001	1.1	9.6	20.6	1	19	487	505	477	505	0.85
7	13	5.6e-05	0.63	10.4	16.3	4	18	553	567	546	568	0.86
8	13	0.056	6.2e+02	0.9	12.7	1	11	608	618	608	630	0.89
9	13	4.5e-10	5e-06	26.7	15.5	1	18	635	652	635	653	0.97
10	13	1	1.1e+04	-3.2	1.3	6	10	682	686	680	688	0.65
11	13	2	2.2e+04	-6.5	10.4	10	18	700	709	689	710	0.78
12	13	3.7e-08	0.00042	20.6	14.6	1	17	746	762	746	771	0.93
13	13	1e-07	0.0011	19.2	10.6	1	18	778	796	778	797	0.89

Sequence Information

Coding Sequence: ATGTCAGACGCGTTCCATCGATATCACGACGGGGTTGGTGGCAATGGTAGCAGCAGCAGTGCCACTGACAACAATAATTATGTTAATTTCAATCAGTTCATGATGCAACATAACATCATTGGTGGTGGTTCGAGCAGTGGAGGTGGAGACGGTGGAGTTGAGGCAGTGACAGCGGCGTCGACAAACCCATTCCATTACAATGGTGGCTATGGCAATCAGTATCAAATGGATGACTACTACTTTGGCGGTGGTGGGGGTGGATCGTCTTTGTACAACTATCAGCCGCGTTACAGTTACTCAAGTTCAACGCTTCACGCTACCGCAGCTGAATTTGTGCCACGATTTTCCAATTTGTCGCTAAATGACGTCGGTGTGAACGTGAACTCAAGTAAAACAAATGATGAGAGGACGCCTGCGCTAGCTCCCTTCACAGCTGATATTCAGAATGCTAATACCAATGGTGGTGCATCTACCAGCAAAGCAAGCACTCAGCTAAATAATTTAGATTCTCCACCGAATAAGTCTCCACCGCAGCGTTACACTGGTGCATCGAGTAAGAATCGTGATTCGACATACCGGGGAGGATCTGGTGTTGGAGTATCATCTCGACGGCAGAATGGGCGTGACTATCAACGAAATCAACGCTACGAAAACCACCGAAGTAATAAGCGAAGAGATGATTGGAATAGGAACCGTGATCGTGTTAATGCTTTCAGAGAGGAGAAGTACACACTGGAGAATGGAAAAGAGAGTCCATTGAACTCACCCGAGAAAAAGTCGCCCAAAAAGCTGCATCCAGAGAATGAGAAACTGTCGCAGAGAGAGAAGCTAATTCGTGAAATAGAGGCCCGACGCCTGGAGTGTCTTGTCTGCGTGGAACCAATCAAGAGTCACAACTCGGTATGGTCCTGTCACAATTGCTATCACATTCTTCATCTCAACTGCATAATTAAGTGGGCATCCAGCTCTAAATCTCAGGACGGCTGGCGCTGTCCTGCATGCCAAAACGTTGAGAAAGACGTGCCACGTGACTATTATTGCTTCTGCGGCAAGCTGAAGAATCCTCAATTCAATCGCAACGATATTGCGCACAGTTGTGGAGAAGTTTGTGGGCGCATCGAAGGATGCTCTCACGCTTGCACTCTTCTTTGCCATCCTGGGCCATGTCCCCCATGTCAAGCCAACGCTACGCGAGTGTGTGGTTGTGGCAAGACCACTAAAACCATGCAATGTTATCTGAAAGAGTCCATTGAGTGCGATGAAATTTGTCAGAAACTTCTCAATTGTGAGTTGCACATGTGCGAAGACAAGTGCCACGAGGGCAAATGTAAGCCCTGCGAACATAAGGTTGATCAGAAGTGTCATTGTGGCAAACAAGAGCGTCAGGTGGCGTGTACAAGAGATTCTCATGAGAAAAAGACATATTCTTGCGGCAAACCTTGCGGAAGGGATCTGAGTTGTGAGAATCACAAATGCAAGGACTGTTGCCATGCCGGTGAATGTCGGCCCTGTAAGGTTAGTCCGGAAATGGTTACTTCGTGCCCCTGTGGAAAGATGCCAGTAGTCCTGGACCAAAGGAAGTCATGTTTGGATCCGATTCCAGTTTGCGATGGTATTTGCAACAAAACACTACGTTGCGGCAAAGCGGCTCATCCTCATCATTGCACGAGTAAATGCCACCTTGGCAACTGTCCACCGTGTAACAAGCAGACTGCTGTCAAGTGCAGGTGTGGGCACATGGACCAGATGATAAAGTGCCGCCAGCTTTCGACTAGAGCTGACGACGCACGATGTAAGAAGCGCTGCGTTAAGAAACGCTCATGCGGTAAACATAAGTGTAACCAGGAGTGTTGCATCGACATTGACCACATCTGTCCAATGCCCTGTAGCTATACTCTATCGTGTGGCAAACACAAGTGCGACCAACCATGTCATCGGGGAAATTGTCCTCCATGCTATCGCAGCTCTTTCGAGGAGTTATACTGCGAGTGTGGGGCGGAGGTGATTTATCCGCCGGTGCCGTGTGGTACGAAGCGTCCACCATGCAAGCGTCCGTGCTCTCGTCAACATCCCTGTGACCATCCAGTTCAGCACAATTGTCACTCTGCAACCAATTGTCCACCGTGTATGATGTTTACTACAAAATGGTGCTTCGGACAACACGAGCAAAGAAAAACCATTCCATGCAGTCAGGAGAGTTTCAGCTGTGGCCTGGCTTGCAACAAGCCACTAACCTGTGGACGCCACAAGTGCATCAAGCCATGCCATGAAGGACCATGTCAAACCGTAGGTGAGATCTGCAAGCAAAGTTGTACAACAGTTAGAGCTGGGTGTGGACACAAGTGCATGGCAGTTTGTCATGATGGAGATTGCCCCGAGACAGCGTGTAAGGAAATGGTCGAAGTAACCTGTGAATGTGGTAACCGAAAGCAGTCGCGAGCTTGTTACGATTTTGCTCGGGAATACCGTCGCATTGCCACTGCACAGTTGGCCTCCTCTATGGCTGAGGTCCAACGTGGCAACACAATTGAATTAAGCGACATCCTGGGACCAGTGAAGATGAACAACAACAAGGCCCTTGAATGCAATGACGAATGCCGCACTTTAGAGCGCAACCGTAGGCTTGCCATTGGTCTGCAAATCCGTAATCCCGATCTGCCACAGAAGCTACTTACCAAATATTCCGATTTTATCCGAGGCTACGCAAAGAAGGACCCCGTTCTTGTGAAAACCATTCACGACTCTCTTACCAACTTGGTCAAATTGGCCAAGGAAAGCAAGCAAAAATCACGAAGCCATTCATTTCCAACAATGAATCGTGAGAAACGGCAACTGGTGCATGAGATGTGTGAAATGTTTGGAGTGGAATCGGTGGCCTATGacgcagagcccaatcggaatGTTGTCGCAACAGCTTACAAGGAAAAGTCTTGGTTGCCGGCGCAAAGTATTATGGAAGTCATACAACGCGAAAGTGGACAACGACGCGTTCCGGTGCCAAGCAACAATGCATGGGGTATAAAGAGGTAG
Protein Sequence: MSDAFHRYHDGVGGNGSSSSATDNNNYVNFNQFMMQHNIIGGGSSSGGGDGGVEAVTAASTNPFHYNGGYGNQYQMDDYYFGGGGGGSSLYNYQPRYSYSSSTLHATAAEFVPRFSNLSLNDVGVNVNSSKTNDERTPALAPFTADIQNANTNGGASTSKASTQLNNLDSPPNKSPPQRYTGASSKNRDSTYRGGSGVGVSSRRQNGRDYQRNQRYENHRSNKRRDDWNRNRDRVNAFREEKYTLENGKESPLNSPEKKSPKKLHPENEKLSQREKLIREIEARRLECLVCVEPIKSHNSVWSCHNCYHILHLNCIIKWASSSKSQDGWRCPACQNVEKDVPRDYYCFCGKLKNPQFNRNDIAHSCGEVCGRIEGCSHACTLLCHPGPCPPCQANATRVCGCGKTTKTMQCYLKESIECDEICQKLLNCELHMCEDKCHEGKCKPCEHKVDQKCHCGKQERQVACTRDSHEKKTYSCGKPCGRDLSCENHKCKDCCHAGECRPCKVSPEMVTSCPCGKMPVVLDQRKSCLDPIPVCDGICNKTLRCGKAAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPMPCSYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRQHPCDHPVQHNCHSATNCPPCMMFTTKWCFGQHEQRKTIPCSQESFSCGLACNKPLTCGRHKCIKPCHEGPCQTVGEICKQSCTTVRAGCGHKCMAVCHDGDCPETACKEMVEVTCECGNRKQSRACYDFAREYRRIATAQLASSMAEVQRGNTIELSDILGPVKMNNNKALECNDECRTLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRGYAKKDPVLVKTIHDSLTNLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKEKSWLPAQSIMEVIQRESGQRRVPVPSNNAWGIKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542617;
90% Identity: iTF_00310688;
80% Identity: -