Csor021957.1
Basic Information
- Insect
- Cheilosia soror
- Gene Symbol
- stc
- Assembly
- GCA_948107745.1
- Location
- OX443564.1:4066540-4069736[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.8 2.7e+04 -4.0 1.6 15 19 329 333 328 333 0.81 2 13 0.082 7.9e+02 0.9 0.2 4 10 362 368 361 369 0.95 3 13 1.3e-06 0.013 16.2 14.5 4 19 376 391 374 391 0.91 4 13 1.2e-05 0.12 13.1 11.2 3 18 429 444 427 445 0.91 5 13 1.1 1.1e+04 -2.8 1.4 8 13 450 455 449 456 0.79 6 13 1.8e-07 0.0017 19.0 18.6 1 19 485 503 485 503 0.98 7 13 0.016 1.5e+02 3.2 15.6 4 18 551 565 544 566 0.86 8 13 0.054 5.3e+02 1.5 11.8 1 11 606 616 606 628 0.91 9 13 6.7e-10 6.5e-06 26.7 15.5 1 18 633 650 633 651 0.97 10 13 1.5 1.5e+04 -3.2 1.3 6 10 680 684 678 686 0.65 11 13 3 2.9e+04 -7.1 10.4 10 18 698 707 687 708 0.77 12 13 1.5e-08 0.00014 22.5 12.8 1 17 744 760 744 766 0.93 13 13 6.1e-07 0.0059 17.3 12.2 1 18 776 794 776 795 0.89
Sequence Information
- Coding Sequence
- ATGTCAGACACGTTCTATCGGTACCACGAAGGAGCTAGTGGCAGTGGTAGCAACAGTAGTGCtacaaccaacaacaacaattatgTAAATTTCAACCAGTTCATGATGCAGCACAACATCATTGGCGGTGGGTCTGGTGGAAATGGTGGAGTTGATGCTGTGCCAGCAACTTCAACAAACCCATTTCATTACAATGGCGGATACGATCAACAATATACAGGAGATGATTTTTACTTCACTGGAAGTTCGCGTAGTGGAGGATTGTCGCGGTATAGCCATCAGCCAATCTATAATTACTCCAATTCGACACTCCATGCAACCGCGGCTGAGTTTGTTCCCAGATTAGCCAATTTGTCGCTGGATGGATCCGCTGTGAGTAAACCAAATGATATGGCACCTGCTCAACCACAAACGGCAGCTGACGTACAGAATGCAAATGCCAACACCAATGGAGTAAGTGGTCCATCGAGCAGCAAATCAGGCTCAAATCACTTTGAATCATCTCTAAATAAATCTCCGCCACAGCGTTACACGGGTGCAACGGGTAAGAATCGCGACTCTACCTCAAGGGGTGGTTCTGCTGTGAACGCATCTTCCTCACGACGGCAGAATGGCCGTGACTATCACCGAAATCAACGGTACGATAACAATCGCAGCAATAAGCGCAGGGATGACTGGAATAGAAACCGCGACCGTGTGAATGCCTTTAGAGAGGAGAAATACACGATTGAAACTGGCAATGATAGTCCGGTTAACTCGCCCGAAAAGAAATCGCCCAAGAAGCCACAACCTGAGAACGAGAAGCTATCGCAGAGAGAAAAACTCATCCGAGAGATCGAGGCGCGTCGCTTAGAATGTCTTGTCTGTGTGGAACCAATCAAGAGTCACAACCCGGTCTGGTCCTGTCACAATTGCTACCACATTCTCCATCTTAACTGCATCATCAAGTGGGCATCGAGCTCCAAATCTGAGGACGGCTGGCGCTGTCCAGCATGTCAAAACGTTGAAAAGGACGTGCCACGAGATTACTTCTGCTTCTGCGGTACTGTGAAGAATCCACAACTGAATCGCAACGACATCGCACATAGTTGTGGAGAAGTTTGTGGCCGCATCGAGGGATGTGCCCATGCCTGCACCCTCCTATGTCATCCGGGACCATGCCCCCCGTGTCAAGCTAACGTAACGCGAGGTTGTGGCTGTGGTAAGACCACCAAAACCATGCAGTGTTATCTGAAGGAGTCCATCGAGTGTGATGCCAAGTGCCAGAAACTGCTCAACTGTGAGTTGCACTTGTGTGAAGATAGCTGTCATGAGGGCAAGTGCAAGCCCTGTGATCAGAAGGTTGATCAAAAGTGTCACTGTGGCAAGCAGGATCGTCAGGTTGCATGCACACGGGACTCGCACGAAAAGAAGAACTATTCTTGTGGCAAGCCGTGCGGTAAAGACCTGAGCTGCGGAAATCACAAGTGTAAAGATTGCTGTCACGCTGGAGAATGTCGTCCGTGCAAGTTCAGTCCGGAGATAGTCACTTCCTGCCCGTGTGGCAAGATGCCAGTGGTGCTGGAACAGAGAAAGTCCTGCTTGGACCCAATTCCCGTCTGCGACGGCATCTGCAGCAAGACCCTGCGATGTGGCAAGGCTGCCCATCCTCATCACTGTACAAGCAAGTGCCACTTAAACAACTGTCCACCATGCAACAAGCAAACGGCCGTCAAATGCAGATGTGGACACATGGATCAGATGATAAAATGCAGACAGTTGTCGACCAGAGCGGACGATGCTCGCTGCAAGAAGCGCTGCGTAAAAAAACGTTCATGTGGCAAGCACAAGTGCAGCCAAGAGTGCTGCATCGACATTGACCACATCTGCCCGATGCCCTGCAACTACACTCTCTCGTGTGGCAAGCACAAGTGTGACCAACCCTGTCATCGGGGCAATTGTCCTCCATGCTATCGCAGCTCCTTTGAGGAGTTGTACTGCGAATGTGGCGCTGAGGTAATTTACCCACCGGTACCATGTGGCACAAAAAAACCACCCTGCAAACGGCCGTGTTCTCGCCAACATCCGTGCGACCATCCAGTTCAGCACAATTGTCATTCGGCAGCCAGCTGTCCGCCGTGTATGATGTTCACCACGAAATGGTGCTTTGGACAGCACGAGCAGCGTAAAACCATTCCATGCAGCCAGGAGAGCTTCAGCTGTGGCCTGGCGTGCAATAAGCCACTGAACTGCGGCCGTCACAAATGCATCAAGCCGTGCCACGAAGGCCCCTGCCAGACAACCGGTGAGATCTGCAAGCAGAATTGTACCACCGTGCGAGCCGGTTGCGGACACAAGTGCATGGCGCCTTGCCATGACGGAGATTGTCCTGAAACAGCGTGCAAGGAGATCGTGGATGTGACTTGTGAGTGTGGCAATCGAAAGCAGACGCGGGCTTGTTACGATTTTGCTCGTGAATACCGCCGTATTGCCACGGCACAATTGGCTTCCTCAATGGCAGAGGTCTCACGCGGAAACACTGTCGAACTAAGCGACATCCTGGGAACGGTcaaaatcaacaacaataaGGCGATTGAATGCAACGACGAGTGCCGCACACTGGAGCGTAATCGTCGGCTTGCCATTGGCCTGCAAATCCGTAATCCCGATCTGCCACAGAAGCTACTTACCAAATATTCCGATTTTATACGCGGCTATGCGAAGAAGGACCCGACTCTGGTGAGATCCATTCACGACTCTCTGACTAACCTCGTCAAACTGGCCAAGGAGAGCAAACAAAAGTCGCGAAGTCACTCGTTTCCCATAATGAACCGTGAGAAACGTCAACTGGTTCACGAGATGTGTGAAATGTTTGGCGTCGAGTCGGTGGCCTACGATGCGGAGCCCAATCGGAATGTCGTCGCAACAGCTTATAAAGAGAAGtcCTGGTTGCCAGCACAAAGTATCATGGACGTCGTACAGCGCGAGAGTGGACAACGACGCGTCCCAGTGCCAAGCAACAATGCTTGGGGCATCAAGAGGTAA
- Protein Sequence
- MSDTFYRYHEGASGSGSNSSATTNNNNYVNFNQFMMQHNIIGGGSGGNGGVDAVPATSTNPFHYNGGYDQQYTGDDFYFTGSSRSGGLSRYSHQPIYNYSNSTLHATAAEFVPRLANLSLDGSAVSKPNDMAPAQPQTAADVQNANANTNGVSGPSSSKSGSNHFESSLNKSPPQRYTGATGKNRDSTSRGGSAVNASSSRRQNGRDYHRNQRYDNNRSNKRRDDWNRNRDRVNAFREEKYTIETGNDSPVNSPEKKSPKKPQPENEKLSQREKLIREIEARRLECLVCVEPIKSHNPVWSCHNCYHILHLNCIIKWASSSKSEDGWRCPACQNVEKDVPRDYFCFCGTVKNPQLNRNDIAHSCGEVCGRIEGCAHACTLLCHPGPCPPCQANVTRGCGCGKTTKTMQCYLKESIECDAKCQKLLNCELHLCEDSCHEGKCKPCDQKVDQKCHCGKQDRQVACTRDSHEKKNYSCGKPCGKDLSCGNHKCKDCCHAGECRPCKFSPEIVTSCPCGKMPVVLEQRKSCLDPIPVCDGICSKTLRCGKAAHPHHCTSKCHLNNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCSQECCIDIDHICPMPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPPCKRPCSRQHPCDHPVQHNCHSAASCPPCMMFTTKWCFGQHEQRKTIPCSQESFSCGLACNKPLNCGRHKCIKPCHEGPCQTTGEICKQNCTTVRAGCGHKCMAPCHDGDCPETACKEIVDVTCECGNRKQTRACYDFAREYRRIATAQLASSMAEVSRGNTVELSDILGTVKINNNKAIECNDECRTLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRGYAKKDPTLVRSIHDSLTNLVKLAKESKQKSRSHSFPIMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKEKSWLPAQSIMDVVQRESGQRRVPVPSNNAWGIKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01542617;
- 90% Identity
- iTF_00312266;
- 80% Identity
- -