Belo028607.1
Basic Information
- Insect
- Baccha elongata
- Gene Symbol
- stc
- Assembly
- GCA_951217065.1
- Location
- OX578272.1:84678001-84685726[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2.8 5.5e+04 -4.0 1.6 15 19 321 325 320 325 0.81 2 15 0.081 1.6e+03 0.9 0.2 4 10 354 360 353 361 0.95 3 15 1.3e-06 0.026 16.2 14.5 4 19 368 383 366 383 0.91 4 15 1.4 2.7e+04 -3.0 1.4 6 10 409 413 408 413 0.90 5 15 2.9e-06 0.057 15.1 12.4 3 18 421 436 419 437 0.91 6 15 2 3.9e+04 -3.5 3.1 8 13 442 447 438 450 0.68 7 15 2.6e-07 0.005 18.5 19.4 1 19 477 495 477 495 0.98 8 15 0.00032 6.4 8.6 16.4 4 18 543 557 536 558 0.86 9 15 0.067 1.3e+03 1.2 12.3 1 11 598 608 598 620 0.91 10 15 4.3e-09 8.5e-05 24.1 14.9 1 18 625 642 625 643 0.97 11 15 2.4 4.6e+04 -3.8 0.9 6 10 672 676 672 677 0.81 12 15 3 5.9e+04 -8.6 11.1 10 18 690 699 679 700 0.71 13 15 8e-09 0.00016 23.3 11.7 1 16 736 751 736 758 0.93 14 15 3.2e-07 0.0063 18.2 11.0 1 18 768 786 768 787 0.89 15 15 0.68 1.3e+04 -2.0 0.5 7 12 802 807 796 807 0.71
Sequence Information
- Coding Sequence
- atgtctgaTGCATTCCATCACCATTATCACGACACAGGACCTGGAGGCgggaataacaacaacaactacgtTGATTTCAATCAATTTATGATGCAGCACAATATAATCCAAGGAGGAGGTGGATCCTCATCTTCTAGGAATCCCAATGGAGACATTGAACGAGAATCATCGTCAAATCCATTCCATTATAATGGAGGTGGTTACGGTGGATATCAGCAGCACCAGAGCGATGACTCTTTCTATACGAATGGAGTAGGAACTGGCTCTGGTAGAATGTCCACATACAACAACTACTCCCAGCCACGAAATAACTCTTACTCCAATTCAAATCTACATGCCAACGCAATCGAATTTGTTCCCAGATTCTCAAATATGTCCCTCGAGGCTGGAACTGCTTTCAAATCTAATGATGTGACTGACATCCAGAATGCCAATGGTCCTTCAACAAGCAAGGTACAACATGGAGGAGATTCTTCAAAGTCACCTCCACAACGTTACACTGGCGCCACGAGCAAAAATCGCGATTCCACATCTCGTGGTGGTTTTGGAGGAGCTGGTGCTTCTTCACGTCGCCAAAATGGAAGAGACTATCAAAGGAATCAGCGTTATGACAATCATCGAAGTAACAAACGTCGAGATGACTGGAATAAGAATCGGGATAGAATGATGGCTTTCAGAGGTGAATACACTTTGGAAAACGGAAAAGACAGTCCACAAGCTTCCCCCGAAAAGAAGTCTTCACCCAAAAAGCCAGCCCAACAGCACTCGGAGAATGAGAAACTCTCCCAGCGAGAGAAACTCATTCGAGAAATCGAAGGACGTCGTCTAGAGTGCCTAGTTTGTGTAGAACTTATAAAAAGTCACAATTCAGTTTGGTCATGTCACAATTGCTATCATATACTCCATCTTAATTGCATTATCAAATGGGCTTCGAGTTCCAAGTCTGAGGATGGGTGGCGTTGTCCAGCATGCCAAAATGTTGAGAAAGATGTTCCACGTGATTATTATTGCTTCTGTGGCAATGTCAAGAGCCCACAGTTGAATCGCAATGACATTGCACACTCTTGCGGCGAAGTATGTGGACGAATTGAAGGATGTGCACATGCTTGCACTTTGTTGTGTCATCCGGGACCATGTCCACCATGCCAGGCTAATGTTACACGAGAGTGTGGATGTGGCAAAACATCAAAGACAATGCAATGTTATTTAAAGGAATCGATTGAGTGTGAAGAGATTTGCCAGAAATTGCTCAATTGTGAGCTGCATGCATGTGAAGATAAATGCCACGAAGGGAAGTGTAAGCCATGTGAGCATAAAGTTGATCAGAAGTGTCACTGTGGAAAACATGATAGACAGGTCGCCTGCACGCGAGATtcgcatgaaaaaaaaacttactccTGTGGCAAACCTTGTGGAAAGGATTTAAGTTGCGGCAACCATAAGTGTAAGGACTGTTGTCATACGGGTGAGTGTCGTCCCTGCAAATCGAGTCCCGAAATGGTCACTTCGTGTCCATGTACCAAGATGCCAATTGTTTTGGAGCAAAGAAAATCCTGCCTGGATCCCATTCCTGTGTGTGAGGGAATCTGCAACAAGACATTGCGATGTGGCAAAGCAGTTCATCCTCATCATTGCACAACCAAGTGCCATTTGGGTAATTGTCCACCTTGCAACAAGCAAACAGCTGTCAAATGTCGTTGCGGTCACATGGATCAGATGATAAAATGCCGACAATTATCGACTAGAGCAGATGACGCTCGTTGTAAGAAGCGCTGCGTCAAAAAACGCTCATGTGGCAAGCACAAATGTAACCAAGAGTGCTGCATCGATATTGATCACATCTGTCCGATGCCCTGTAACTATACTCTATCGTGTGGCAAACATAAGTGCGATCAGCAATGTCATCGAGGAAATTGTCCCCCATGCTACCGCAGCTCATTCGAAGAGTTGTATTGCGAATGTGGAACGGAAGTCATTTATCCGCCAGTTCCATGTGGCACTAAGAAGCCAGTGTGTAAGCGTCCCTGTTCAAGGTCACATCCATGCGAGCATCCAGTTCAACATAACTGCCATTCGGCGGCTACTTGCCCGCCCTGTATGATGTTCACAACGAAGTGGTGCTTCGGGCAACACGAACAGCGCAAAACCATTCCATGCATCCAGGTGAGCTTCAGCTGTGGCCTGGCGTGCAACAAGCCACTGTCCTGTGGACGTCACAAATGCATCAAACCTTGTCATGAGGGGCCGTGTCAAGTTGCCGGTGAGATTTGTAAGCAGAATTGCACCACTCTTCGCCCAAGTTGTGGCCACAAGTGTATGGCGCCGTGTCATGATGGAAATTGTCCAGAGATTGCTTGCAAGGAGATGGTCGAAATAACGTGTGAATGTGGCAATAGGAAGCAGACAAGGACTTGTCATGACTTCGCCAGGGAGTATAGACGTATAGCCACGGCACAATTAGCTTCATCGATGGCTGAGGTTCAACGAGGCAATAGCATCGAACTGAGTGATATTCTTGGTCCAGTTAAGATCAACAGTAATAAAGCACTTGAATGCAACGATGAGTGTCGGACATTAGAGCGCAATCGACGCCTTGCAATTGGTTTGCAAATCCGTAATCCCGATCTGCCACAGAAGCTATTAACCAAATATTCTGATTTCACTCGCGGTTATGCTAAGAAAGACCCAACTTTGGTCAAGAGCATTCATGATTCGTTGACAACTCTCGTCAAATTGGCCAAAGAGAGTAAGCAGAAGTCACGTAGCTATTCTTTCCCGACTATGAATCGAGAGAAAAGACAATTGGTTCATGAGATGTGCGAAATGTTTGGAGTAGAATCGGTGGCTTATGATGCAGAGCCGAATAGGAATGTAGTTGCAACAGCTTTTAAAGAGAAGtcCTGGTTGCCAGCTCAGAGTATCATGGAGGTTATTCAACGAGAAAGTGGACAAAGGCGTGTTCCAGTGCCGAGTAATAATGCTTGGGGCATTAAGCGATAG
- Protein Sequence
- MSDAFHHHYHDTGPGGGNNNNNYVDFNQFMMQHNIIQGGGGSSSSRNPNGDIERESSSNPFHYNGGGYGGYQQHQSDDSFYTNGVGTGSGRMSTYNNYSQPRNNSYSNSNLHANAIEFVPRFSNMSLEAGTAFKSNDVTDIQNANGPSTSKVQHGGDSSKSPPQRYTGATSKNRDSTSRGGFGGAGASSRRQNGRDYQRNQRYDNHRSNKRRDDWNKNRDRMMAFRGEYTLENGKDSPQASPEKKSSPKKPAQQHSENEKLSQREKLIREIEGRRLECLVCVELIKSHNSVWSCHNCYHILHLNCIIKWASSSKSEDGWRCPACQNVEKDVPRDYYCFCGNVKSPQLNRNDIAHSCGEVCGRIEGCAHACTLLCHPGPCPPCQANVTRECGCGKTSKTMQCYLKESIECEEICQKLLNCELHACEDKCHEGKCKPCEHKVDQKCHCGKHDRQVACTRDSHEKKTYSCGKPCGKDLSCGNHKCKDCCHTGECRPCKSSPEMVTSCPCTKMPIVLEQRKSCLDPIPVCEGICNKTLRCGKAVHPHHCTTKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPMPCNYTLSCGKHKCDQQCHRGNCPPCYRSSFEELYCECGTEVIYPPVPCGTKKPVCKRPCSRSHPCEHPVQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCIQVSFSCGLACNKPLSCGRHKCIKPCHEGPCQVAGEICKQNCTTLRPSCGHKCMAPCHDGNCPEIACKEMVEITCECGNRKQTRTCHDFAREYRRIATAQLASSMAEVQRGNSIELSDILGPVKINSNKALECNDECRTLERNRRLAIGLQIRNPDLPQKLLTKYSDFTRGYAKKDPTLVKSIHDSLTTLVKLAKESKQKSRSYSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAFKEKSWLPAQSIMEVIQRESGQRRVPVPSNNAWGIKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01542617;
- 90% Identity
- -
- 80% Identity
- -