Basic Information

Insect: Ferdinandea cuprea
Gene Symbol: stc
Assembly: GCA_963576555.1
Location: OY754961.1:84905599-84908804[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.9 3.1e+04 -4.0 1.6 15 19 325 329 324 329 0.81

2 13 0.054 8.9e+02 0.9 0.2 4 10 358 364 357 365 0.95

3 13 5.5e-07 0.009 16.9 15.1 1 19 370 387 370 387 0.93

4 13 8.6e-07 0.014 16.2 11.4 3 18 425 440 423 441 0.91

5 13 1.2 2e+04 -3.4 2.5 7 13 445 451 442 452 0.77

6 13 1.2e-07 0.0019 19.0 18.6 1 19 481 499 481 499 0.98

7 13 0.00022 3.6 8.6 15.7 4 18 547 561 540 562 0.86

8 13 0.045 7.3e+02 1.2 12.3 1 11 602 612 602 624 0.91

9 13 4.4e-10 7.3e-06 26.7 15.5 1 18 629 646 629 647 0.97

10 13 2 3.3e+04 -12.8 15.8 10 18 694 703 680 704 0.67

11 13 6.3e-08 0.001 19.9 15.9 1 17 740 756 740 765 0.90

12 13 1.2e-05 0.19 12.6 10.9 4 18 774 790 772 791 0.85

13 13 1.3 2.2e+04 -3.6 0.1 8 12 807 811 806 811 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.9	3.1e+04	-4.0	1.6	15	19	325	329	324	329	0.81
2	13	0.054	8.9e+02	0.9	0.2	4	10	358	364	357	365	0.95
3	13	5.5e-07	0.009	16.9	15.1	1	19	370	387	370	387	0.93
4	13	8.6e-07	0.014	16.2	11.4	3	18	425	440	423	441	0.91
5	13	1.2	2e+04	-3.4	2.5	7	13	445	451	442	452	0.77
6	13	1.2e-07	0.0019	19.0	18.6	1	19	481	499	481	499	0.98
7	13	0.00022	3.6	8.6	15.7	4	18	547	561	540	562	0.86
8	13	0.045	7.3e+02	1.2	12.3	1	11	602	612	602	624	0.91
9	13	4.4e-10	7.3e-06	26.7	15.5	1	18	629	646	629	647	0.97
10	13	2	3.3e+04	-12.8	15.8	10	18	694	703	680	704	0.67
11	13	6.3e-08	0.001	19.9	15.9	1	17	740	756	740	765	0.90
12	13	1.2e-05	0.19	12.6	10.9	4	18	774	790	772	791	0.85
13	13	1.3	2.2e+04	-3.6	0.1	8	12	807	811	806	811	0.76

Sequence Information

Coding Sequence: ATGTCTGATAAGTTTCGTCGCTATCACGACGGAGCtggtggcagtggcagtggagGCAGCAGCAGTGCCACTACCAGCAACAACAACTATGTAAATTTTAACCAGTTCATGATGCAGCACAACATCATCGGCGGCACAACCAGTGGTGGAGTTGAGACAGCGCCAGCTACTTCGACTAATCCATTCCATTACAACGGTGGCTACAACAGCAATCAGTATGATTACCAATTGGATGGCGGTTCATCGGGTGGAGGAGGGTCGTCCTCCTCGCACAGCTACCAGCCACGTTATGGCTACACAAACTCAACACTTCATGCCAATGCAGCGGAATTCGTTCCGAGATTCTCCAACATGTCACTGGGCGAAGGTAATTCTGCAGGCAAAGCAAATGACGTCGCGCAAACGCCATCGCTCATGTCGGCTGACATTCAAAATGCCAACATGAATGGAATCGGTGGTCCGTCGACCAGCAAACCGGGCCCGAATCCCTTTGACAAGTCTCCGCCGCAGCGCTACACTGGAGCGACGAGCAAGAATCGTGAGTCCACATCACGGGGTGGTTCAGTGGTGGGAGCATCCTCGTCACGGCGGCAGAATGGCCGCGACTATCATCGAAATCAGCGGTACGACAATCATCGAAGCAACAAGCGCCGCGATGACTGGAACAGGAACCGCGATCGCGTGAACGCCTTCAGAGACGAGAAGTACACCATTGAGAATGGGAAGGACAGCCCACTGAATTCGCCCGAGAAGAAATCGCCCAAGAAACCATCGCACTCGGATAACGAAAAACTGTCGCAGCGTGAGAAGCTTATTCGGGAGATCGAGGGACGCCGGTTGGAGTGCCTTGTCTGCGTGGAATCAATCAAGAGTCACAACTCCGTGTGGTCCTGTCACAACTGCTATCACATTTTGCATCTCAGCTGCATCATTAAGTGGGCTTCGAGTTCCAAGTCCGAGGACGGCTGGCGTTGTCCCGCCTGTCAGAATGTGGAGAAGGACGTGCCACGAGACTACTTCTGCTTCTGCGGCCGAGTGAAGAATCCACAGTTCAATCGCAATGACATTGCGCACAGTTGTGGCGAAGTGTGTGGCCGCATCGAGGGTTGCTCGCATGCCTGCACTCTGCTCTGCCATCCGGGACCATGTCCTCCGTGTCAGGCGAACGTAACACGGGAGTGTGGTTGCGGCAAGACCACCAAAACTATGCAGTGCTATCTGAAGGAGGCCATTGAGTGCGACGCCAAGTGTCAAAAGTTGCTCAATTGTGAGTTACACGCCTGTGAAGCCACCTGCCACGATGGCAAGTGCAAGCCGTGCGAACATAAGGTCGACCAGAAGTGCCACTGTGGGAAGCAAGATCGCCAGGTGGCGTGCACCAGAGACTCGCACGAAAAGAAGAATTACTCGTGCGGCAAACCATGTGCCAAGGACCTTAGCTGCGGTAACCACAAGTGCAAAGACTGCTGCCACGCTGGGGAATGTCGTCCATGCAAGTTGAGTCCGGAGATAGTCACCTCGTGCCCGTGTGGCAAGATGCCTGTAGTTTTGGAGCAGAGAAAATCCTGCCTGGATCCGATCCCTGTCTGCGACGGTGTCTGCAACAAAACGTTGCGCTGTGGCAAGGCTGTCCACCCTCATCACTGTGTCAGCAAATGCCACTTGGGTAATTGCCCGCCGTGCAACAAACAAACAGCAGTCAAGTGCCGTTGCGGGCACATGGATCAGATGATTAAATGCCGACAGCTGTCGACCAGAGCCGACGACGCACGCTGCAAGAAGCGCTGCGTGAAGAAACGCTCTTGCGGCAAGCACAAGTGCAACCAGGAGTGTTGCATCGACATTGACCACATCTGCCCGATGCCCTGCAACTACACGCTCTCCTGTGGCAAGCACAAGTGCGATCAGCCCTGTCATCGCGGCAATTGCCCGCCATGCTACCGCAGCTCCTTCGAGGAGTTGTACTGCGAATGCGGTGCCGAAGTTATCTATCCGCCGGTGTCGTGCGGCACAAAGCGTCCACCTTGCAAGCGTCCCTGCTCTCGACAACACCCATGCGAGCATCCAGTTCAGCACAACTGCCATTCGGCAGCTACTTGCCCGCCGTGCATGATGTTCACCACGAAATGGTGCTTTGGACAGCACGAGCAGAGGAAAACCATTCCATGTAGCCAGGAGAGTTTCAGCTGCGGCCTGGCCTGCAACAAGCCGCTGAGTTGCGGCCGTCACAAGTGCATCAAGCCGTGCCACGAGGGCCCATGCCAGTCACCCGGCGAAGTTTGCAAGCAGAGTTGCACCACCGTGCGAGCAGCCTGTGTCCACAAATGCATGGCACCCTGTCACGATGGAGAATGTCCCGAAACTGCGTGCAAAGAAATTGTGGAAGTGACCTGTGAGTGTGGTAATCGAAAGCAGACGCGAGCTTGTCATGACTTTGCTCGAGAATATCGTCGCATTGCCACTGCGCAGTTGGCCTCCTCCATGGCGGAGGTATCGCGCGGCAACACCATCGAACTAAGCAACATTCTGGGACCACTCAagatgaacaacaacaaatcaattgaatgcaacgatGAATGCCGCACATTGGAGCGCAACCGCCGGCTGGCTATTGGCCTACAAATCCGTAATCCCGATGTGACTCAGAAGCTACTTACCAAATATTCCGATTTTGTACGCGGCTATGCGAAGAAGGACCCAACTCTGGTGCGGAGCATTCATGACTCGCTGACCAATCTGGTTAAGCTGGCCAAGGAGAGCAAGCAAAAGTCACGCAGTCACTCGTTTCCCATAATGAACCGCGAGAAACGCCAGTTGGTTCATGAAATGTGCGAAATGTTTGGCGTCGAGTCGGTGGCCTATGACGCGGAACCTAATCGGAATGTTGTCGCAACAGCTTACAAGGAGAAGTCATGGCTGCCAGCACAGAGCATCATGGATGTCGTACAACGCGAGAGCGGACAGCGTCGCGTTCCCGTGCCAAGCAACAATGCATGGGGCCTCAAGAGGTAG
Protein Sequence: MSDKFRRYHDGAGGSGSGGSSSATTSNNNYVNFNQFMMQHNIIGGTTSGGVETAPATSTNPFHYNGGYNSNQYDYQLDGGSSGGGGSSSSHSYQPRYGYTNSTLHANAAEFVPRFSNMSLGEGNSAGKANDVAQTPSLMSADIQNANMNGIGGPSTSKPGPNPFDKSPPQRYTGATSKNRESTSRGGSVVGASSSRRQNGRDYHRNQRYDNHRSNKRRDDWNRNRDRVNAFRDEKYTIENGKDSPLNSPEKKSPKKPSHSDNEKLSQREKLIREIEGRRLECLVCVESIKSHNSVWSCHNCYHILHLSCIIKWASSSKSEDGWRCPACQNVEKDVPRDYFCFCGRVKNPQFNRNDIAHSCGEVCGRIEGCSHACTLLCHPGPCPPCQANVTRECGCGKTTKTMQCYLKEAIECDAKCQKLLNCELHACEATCHDGKCKPCEHKVDQKCHCGKQDRQVACTRDSHEKKNYSCGKPCAKDLSCGNHKCKDCCHAGECRPCKLSPEIVTSCPCGKMPVVLEQRKSCLDPIPVCDGVCNKTLRCGKAVHPHHCVSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPMPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVSCGTKRPPCKRPCSRQHPCEHPVQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQESFSCGLACNKPLSCGRHKCIKPCHEGPCQSPGEVCKQSCTTVRAACVHKCMAPCHDGECPETACKEIVEVTCECGNRKQTRACHDFAREYRRIATAQLASSMAEVSRGNTIELSNILGPLKMNNNKSIECNDECRTLERNRRLAIGLQIRNPDVTQKLLTKYSDFVRGYAKKDPTLVRSIHDSLTNLVKLAKESKQKSRSHSFPIMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKEKSWLPAQSIMDVVQRESGQRRVPVPSNNAWGLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542617;
90% Identity: iTF_01254486;
80% Identity: -