Curb018944.1
Basic Information
- Insect
- Cheilosia urbana
- Gene Symbol
- stc
- Assembly
- GCA_946477595.1
- Location
- CAMLCJ010000156.1:1844226-1847436[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.9 4.1e+04 -4.0 1.6 15 19 325 329 324 329 0.81 2 13 0.054 1.2e+03 0.9 0.2 4 10 358 364 357 365 0.95 3 13 5.5e-07 0.012 16.9 15.1 1 19 370 387 370 387 0.93 4 13 1.9e-06 0.041 15.2 12.0 3 18 425 440 423 441 0.91 5 13 0.76 1.7e+04 -2.8 1.4 8 13 446 451 445 452 0.79 6 13 1.2e-07 0.0026 19.0 18.6 1 19 481 499 481 499 0.98 7 13 0.01 2.3e+02 3.2 15.6 4 18 547 561 540 562 0.86 8 13 0.036 8e+02 1.5 11.8 1 11 602 612 602 624 0.91 9 13 4.4e-10 9.8e-06 26.7 15.5 1 18 629 646 629 647 0.97 10 13 1 2.2e+04 -3.2 1.3 6 10 676 680 674 682 0.65 11 13 2 4.4e+04 -6.0 10.2 10 18 694 703 683 704 0.78 12 13 6.4e-09 0.00014 23.0 11.7 1 16 740 755 740 762 0.92 13 13 5.7e-07 0.013 16.8 10.7 1 18 772 790 772 791 0.89
Sequence Information
- Coding Sequence
- ATGTCCGACACGTTTTATCGGTACCACGATGCAGCTGGCGGCAGTGGTAGCAACAGTAGCGCTACAACCGACAACAACAATTATGTAAATTTCAACCAGTTCATGATGCAGCACAACATCATTGGCGGTGGAGCTGATGCGTCGCCAGCAACCTCCACAAATCCATTTCATTACAACGGTGGATCACAATACGATCAACAATATTCAGTCGATGAATTCTACTTCAATGGGAGTTCACGTAATGGCGGAACGTCGAGGTATAACCATCAGCCACGCCATAGTTACTCCAATTCGACACTTCATGCGACTGCGGCTGAGTTTATTCCCAGGTTCTCCAGCTTGTCGCTGGGCGAGACTGCTGTGAGTAAACCAAATGACGTGGCAGCCACGCAAATACAAACCGCAGCTGACGTTCAGAATGCGAATGCCAACAGCAATGGAGTGAGTGGTCCATCGAGCAGTAAATCAGGCTCAAATCACTTTGAATCCTCTTTAAATAAATCTCCTCCACAACGTTACACCGGTGCCACGGGTAAGAATCGCGACTCCACTTCAAGAGGTAGTTCGGCTGTGAACGCCAATTCCTCTCGACGACAGAATGGCCGTGACTATCACAGAAATCAACGGTACGATAACAATCGCAGCAACAAGCGCAGGGATGACTGGAATAGAAACCGCGATCGTGTGAATGCCTTCAGGGAGGAGAAGTACACAATTGAGAATGGCAACGACAGTCCGCTTAACTCGCCCGAAAAGAAATCGCCGAAGAAGCCACAACCCGAGAACGAGAAACTGTCACAGAGGGAAAAACTCATCCGAGAGATCGAGGCACGTCGCTTAGAGTGTCTTGTTTGCGTGGAGCCAATCAAGAGTCACAACCCAGCCTGGTCCTGTCACAACTGCTACCACATTCTCCATCTTAACTGCATCATCAAGTGGGCATCGAGCTCCAAATCTGAGGACGGCTGGCGCTGTCCCGCATGTCAAAACGTTGAAAAGGACGTGCCACGAGACTACTTCTGCTTCTGTGGGACTGTTAAGAATCCACAACTGAATCGCAACGATATTGCACACAGTTGCGGAGAAGTTTGTGGTCGCATCGAGGGATGCTCGCATGCCTGCACCCTCCTATGCCATCCGGGACCCTGTCCACCGTGTCAAGCTAACGTAACACGAGAATGCGGCTGTGGTAAGACCACCAAAACCATGCAGTGCTATCTAAAGGAGTCTATCGAGTGTGACGCCAAATGCCAGAAGCTGCTCAACTGCGAGCTACACTCGTGCGAAGATAGCTGTCATGAGGGCAAGTGCAAGCCCTGTGATCAGAAGGTCGATCAGAAGTGCCACTGCGGCAAGCAGGATCGTCAGGTTGCATGCACAAGAGACTCGCACGAAAAGAAGAACTATTCGTGTGGCAAGCCTTGCGGCAAAGACTTGAGCTGCGGAAACCACAAGTGTAAAGACTGCTGTCACGCTGGAGAATGCCGCCCGTGCAAGTTCAGTCCGGAGATAGTCACCTCATGCCCGTGTGGAAAGATGCCGGTGGCACTCGAACAGAGAAAGTCGTGCCTGGACCCGATTCCCGTCTGCGACGGCATCTGCAGCAAGACACTCCGATGTGGCAAGGCCGCCCATCCTCATCACTGCACAAGCAAGTGCCACTTGAACAACTGTCCGCCGTGCAACAAGCAAACGGCCGTCAAGTGTAGGTGTGGACACATGGATCAGATGATAAAATGCCGACAACTGTCGACTAGAGCCGACGATGCACGCTGCAAGAAGCGCTGCGTTAAAAAACGCTCGTGTGGCAAGCACAAGTGCAGCCAAGAGTGCTGCATCGACATTGACCACATCTGCCCGATGCCCTGCAACTATACTCTCTCGTGTGGCAAGCACAAGTGCGACCAACCCTGTCATCGGGGCAATTGCCCTCCGTGCTATCGCAGCTCCTTTGAGGAGCTGTACTGCGAATGTGGAGCTGAGGTAATCTACCCACCGGTACCATGTGGCACAAAGAAACCACCGTGCAAGCGGCCGTGTTCTCGCCAACATCCATGCGACCATCCAGTTCAGCACAATTGCCATTCGGCAGCCAACTGTCCACCGTGTATGATGTTCACCACGAAATGGTGCTTTGGACagcatgagcagcgtaaaaccATTCCATGCAGCCAGGAGAGCTTCAGCTGTGGCCTGGCTTGCAATAAGCCGCTGAACTGCGGCCGCCACAAATGCATCAAGCCGTGCCACGAGGGCCCTTGCCAAGCAGCCGGCGAGATCTGCAAGCAGAATTGTACCACAGTGCGAGCGGCCTGCGGACACAAGTGCATGGCGGCTTGTCATGACGGAGATTGTCCTGAGACTGCGTGCAAGGAGATCGTGGATGTGACTTGTGAATGCGGCAACCGAAAGCAGACACGATCATGCTACGACTTCGCTCGTGAATACCGTCGTATTGCCACGGCACAGTTGGCTTCCTCAATGGCAGAGGTTTCACGCGGAAACACTGTCGAACTTAGTGACATCCTGGGAACTGTCAAGATTAACAACGATAAGGCGATTGAATGCAACGATGAATGCCGTACGCTCGAGCGAAATCGTCGGCTTGCCATTGGCCTGCAAATCCGTAATCCCGATCTGCCACAGAAGCTACTTACCAAATATTCCGATTTTATACGCGGCTATGCGAAGAAGGACCCTACTCTGGTGAAATCCATTCACGACTCTCTGACCAACCTCGTCAAACTGGCCAAGGAGAGCAAACAGAAGTCCCGAAGTCACTCGTTTCCCATAATGAACCGCGAGAAACGTCAGCTAGTTCACGAGATGTGCGAAATGTTTGGCGTCGAGTCCGTCGCCTACGATGCCGAGCCCAATCGGAATGTTGTCGCAACAGCTTACAAGGAGAAGTCCTGGTTGCCAGCACAAAGTATCATGGATGTCGTACAGCGTGAGAGTGGACAGCGACGCGTCCCAGTGCCAAGCAACAATGCTTGGGGCATCAAGAGGTAA
- Protein Sequence
- MSDTFYRYHDAAGGSGSNSSATTDNNNYVNFNQFMMQHNIIGGGADASPATSTNPFHYNGGSQYDQQYSVDEFYFNGSSRNGGTSRYNHQPRHSYSNSTLHATAAEFIPRFSSLSLGETAVSKPNDVAATQIQTAADVQNANANSNGVSGPSSSKSGSNHFESSLNKSPPQRYTGATGKNRDSTSRGSSAVNANSSRRQNGRDYHRNQRYDNNRSNKRRDDWNRNRDRVNAFREEKYTIENGNDSPLNSPEKKSPKKPQPENEKLSQREKLIREIEARRLECLVCVEPIKSHNPAWSCHNCYHILHLNCIIKWASSSKSEDGWRCPACQNVEKDVPRDYFCFCGTVKNPQLNRNDIAHSCGEVCGRIEGCSHACTLLCHPGPCPPCQANVTRECGCGKTTKTMQCYLKESIECDAKCQKLLNCELHSCEDSCHEGKCKPCDQKVDQKCHCGKQDRQVACTRDSHEKKNYSCGKPCGKDLSCGNHKCKDCCHAGECRPCKFSPEIVTSCPCGKMPVALEQRKSCLDPIPVCDGICSKTLRCGKAAHPHHCTSKCHLNNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCSQECCIDIDHICPMPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPPCKRPCSRQHPCDHPVQHNCHSAANCPPCMMFTTKWCFGQHEQRKTIPCSQESFSCGLACNKPLNCGRHKCIKPCHEGPCQAAGEICKQNCTTVRAACGHKCMAACHDGDCPETACKEIVDVTCECGNRKQTRSCYDFAREYRRIATAQLASSMAEVSRGNTVELSDILGTVKINNDKAIECNDECRTLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRGYAKKDPTLVKSIHDSLTNLVKLAKESKQKSRSHSFPIMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKEKSWLPAQSIMDVVQRESGQRRVPVPSNNAWGIKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01542617;
- 90% Identity
- iTF_00312266;
- 80% Identity
- -