Basic Information

Insect: Portevinia maculata
Gene Symbol: stc
Assembly: GCA_949715645.1
Location: OX454528.1:6552426-6555626[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.8 1e+05 -4.0 1.6 15 19 325 329 324 329 0.81

2 14 0.15 5.6e+03 0.0 0.3 4 10 358 364 357 366 0.93

3 14 4.2e-06 0.15 14.6 13.6 1 19 370 387 369 387 0.93

4 14 1.3e-06 0.047 16.2 11.4 3 18 425 440 423 441 0.91

5 14 1.8 6.8e+04 -3.4 2.5 7 13 445 451 442 452 0.77

6 14 3.5e-05 1.3 11.7 16.5 1 19 481 499 481 499 0.98

7 14 8.4e-05 3.1 10.4 16.3 4 18 547 561 540 562 0.86

8 14 0.065 2.4e+03 1.2 12.5 1 11 602 612 602 624 0.91

9 14 6.7e-10 2.4e-05 26.7 15.5 1 18 629 646 629 647 0.97

10 14 2 7.4e+04 -3.6 1.5 6 10 676 680 675 681 0.61

11 14 3 1.1e+05 -8.0 11.0 9 18 693 703 683 704 0.76

12 14 2.7e-07 0.0099 18.4 15.0 1 17 740 756 740 765 0.89

13 14 7e-07 0.026 17.1 10.3 1 18 772 790 772 791 0.90

14 14 2 7.4e+04 -3.6 0.1 8 12 807 811 806 811 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.8	1e+05	-4.0	1.6	15	19	325	329	324	329	0.81
2	14	0.15	5.6e+03	0.0	0.3	4	10	358	364	357	366	0.93
3	14	4.2e-06	0.15	14.6	13.6	1	19	370	387	369	387	0.93
4	14	1.3e-06	0.047	16.2	11.4	3	18	425	440	423	441	0.91
5	14	1.8	6.8e+04	-3.4	2.5	7	13	445	451	442	452	0.77
6	14	3.5e-05	1.3	11.7	16.5	1	19	481	499	481	499	0.98
7	14	8.4e-05	3.1	10.4	16.3	4	18	547	561	540	562	0.86
8	14	0.065	2.4e+03	1.2	12.5	1	11	602	612	602	624	0.91
9	14	6.7e-10	2.4e-05	26.7	15.5	1	18	629	646	629	647	0.97
10	14	2	7.4e+04	-3.6	1.5	6	10	676	680	675	681	0.61
11	14	3	1.1e+05	-8.0	11.0	9	18	693	703	683	704	0.76
12	14	2.7e-07	0.0099	18.4	15.0	1	17	740	756	740	765	0.89
13	14	7e-07	0.026	17.1	10.3	1	18	772	790	772	791	0.90
14	14	2	7.4e+04	-3.6	0.1	8	12	807	811	806	811	0.76

Sequence Information

Coding Sequence: ATGTCTGACACGTTTCAACGGTATCGCGACGGAGCTGGTGGCAGTGGTAGCGGCGGTAGTAGCAGagccaccaacaacaacaattatGTAAATTTCAACCAATTCATGATGCAGCACAATATCGTTGGTGGCACAGGGAGTGGAAATGATGGAGTTGATACAGCGTCAGCTACTTCGACAAATCCATTCCATTACAACGGTGAATACAGCGAACAGTACCCGGCGGATGATTACTACTTTAATGGTGGCACGGCGGCTGGTGGAGAAGTATCGTCCTACAACTACCATCCACGCTACAGCTATACAAATTCAACACTCCACGCAACCGCAGCAGAGTTCGTTCCGAGATTCTCCAACATGTCGCTGGGCGAAGCTGCTGCAAGCAAAGCAAACGACGTGGCTGCAACTCCAATAATCTATGCAAATGACATTCAGAATGCCAACACGAATGGAACTAGTGGCCCATCGACCAGCAATATGGGCCCAAATCACTTTGACAAGTCTCCGCCGCACCGATACACTGGTGCGACGAGCAAGAATCGCGATTCAACATCGCGTGGTGGTTCTGTGATAGGAGCATCTTCCTCACGGCGGCAGAATGGTCGCGACTATCACCGGAATCAACGGTACGACAATCACCGAAGCAACAAACGCAGGGATGACTGGAATAGGAACCGAGATCGCGTAAACGCCTTCAGGGACGAGAAGTACACCATTGAAAATGGCAAGGACAGTCCACTGAATTCGCCCGAAAAAAAATCGCCCAAGAAGCCGCATCTGGAGAACGAAAAACTGTCGCAGCGGGAGAAGCTTATCCGTGAGATCGAGGCACGCCGCCTGGAATGCCTTGTCTGTGTGGAATCTATCAAGAGTCATAACTCTGTTTGGTCCTGTCACAACTGCTACCATATTTTGCATCTCAACTGTATCATCAAGTGGGCATCCAGCTCCAAGTCCGAGGACGGCTGGCGTTGTCCAGCCTGTCAGAATGTGGAGAAGGACGTTCCACGGGACTACTTCTGCTTCTGCGGCAGGGTGAAGAATCCGCAGTTCAACCGCAATGACATTGCGCACAGTTGTGGCGAAACTTGTGGTCGCATCGAGGGCTGCTCTCACGCCTGCACCCTGCTTTGCCACCCGGGCCCCTGTCCAGCGTGCCAAGCCAACGTAACACGCGAATGTGGATGTGGCAAGACCACCAAAACGATGCAGTGCTATCTGAAGGAGTCTATCGAGTGCGACGCCAAGTGTCAGAAGCTGCTCAATTGTGAGTTGCACGCCTGCGAAGCCACATGTCATGATGGCAAGTGCAAACCCTGCGAACATAAGGTCGACCAGAAGTGCCACTGTGGCAAGCAGGATCGTCAAGTGGCGTGCACAAGAGATTCGCACGAAAAGAAGACCTATTCCTGCGGCAAACCATGCGCCAAGGACCTTAGCTGCGGTAACCATAAATGTAAAGACTGCTGCCACGCTGTTGAATGTCGCCCGTGCAAGCTCAGCCCAGAAATAGTAACTTCGTGCCCATGCGGCAAAATGCCGGTTGTGCTGGAACAGAGAAAGTCCTGCTTGGACGCAATACCCGTCTGTGATGGTATCTGCGACAAGACATTGCGTTGTGGCAAGGCAGCCCACCCTCATCACTGCACTAGTAAGTGTCACTTGGGAAACTGTCCGCCGTGTAACAAGCAAACGGCTGTTAAGTGCCGTTGCGGTCACATGGATCAGATGCTTAAATGCAGGCAGCTGTCGACCAGAGCTGATGATGCACGCTGCAAGAAGCGCTGCGTTAAGAAACGTTCGTGTGGCAAGCACAAGTGCAAACAGGAGTGCTGCATCGACATTGACCACATCTGCCCGATGCCCTGCAACTATACTCTCTCATGCGGCAAGCACAAGTGCGACCAGCCCTGTCACCGTGGCAATTGCCCTCCCTGCTATCGCAGCTCCTTCGAGGAGTTGTACTGCGAATGTGGAGCAGAGGTTATCTATCCGCCGGTTTCATGCGGCACAAAGCGACCTCCATGCAAGCGCCCTTGCTCTCGGCGCCACCCGTGTGACCATCCAGTTCAGCACAGTTGCCATTCGGCAGCCACTTGTCCACCGTGCATGATATTCACCACGAAATGGTGCTTTGGACAGCACGAGCAGAGGAAAATTATTCCATGCAGCCAGGAGAGTTTCAGCTGTGGCCTCGCCTGCAACAAGCCGCTGAGTTGCGGGCGCCATAAATGCATCAAGCCGTGCCACGAGGGCGCATGCCAGACACCTGGCGAAGTTTGCAAGCAGAGTTGCGCAACCGTGCGAGCCGGGTGTGGTCACAAATGCATGGCGGCCTGTCACGATGGAGACTGCCCCGATACTGCGTGTAAAGAAATCGTGGAAGTAACCTGTGAGTGTGGAAATCGGAAGCAGACCCGAGCTTGTCATGATTTTGCCAGAGAATACCGTCGTATTGCCACGGCACAGTTGGCCTCTTCCATGGCTGAGGTATCACGAGGCAACACCATCGAGCTAAGCGACATTCTTGGACCAGTCAAgatgaacaacaacaacaaatcGATTGAATGCAACGATGAGTGCCGGACGCTGGAGCGCAACCGCCGCTTGGCTATTGGCCTGCAAATCCGTAATCCCGATTTGCCTCAGAAGCTACTTACCAAATATTCCGATTTTATACGTGGATATGCGAAGAAGGACCCAACTCTCGTGAAAACCATTCACGACTCGCTGACCCATCTGGTCAAGCTGGCCAAGGAAAGCAAGCAGAAATCTCGCAGTCACTCGTTTCCCATAATGAACCGTGAGAAACGCCAGTTGGTACACGAGATGTGTGAGATGTTTGGCGTCGAATCGGTGGCCTATGACGCGGAGCCGAATCGGAATGTTGTTGCAACAGCTTACAAGGAGAAGTCATGGCTACCAGCGCAAAGTATCATGGATGTAGTACAACGCGAGAGTGGACAGCGTCGCGTTCCCGTGCCAAGCAACAATGCATGGGGCCTCAAGAGATAA
Protein Sequence: MSDTFQRYRDGAGGSGSGGSSRATNNNNYVNFNQFMMQHNIVGGTGSGNDGVDTASATSTNPFHYNGEYSEQYPADDYYFNGGTAAGGEVSSYNYHPRYSYTNSTLHATAAEFVPRFSNMSLGEAAASKANDVAATPIIYANDIQNANTNGTSGPSTSNMGPNHFDKSPPHRYTGATSKNRDSTSRGGSVIGASSSRRQNGRDYHRNQRYDNHRSNKRRDDWNRNRDRVNAFRDEKYTIENGKDSPLNSPEKKSPKKPHLENEKLSQREKLIREIEARRLECLVCVESIKSHNSVWSCHNCYHILHLNCIIKWASSSKSEDGWRCPACQNVEKDVPRDYFCFCGRVKNPQFNRNDIAHSCGETCGRIEGCSHACTLLCHPGPCPACQANVTRECGCGKTTKTMQCYLKESIECDAKCQKLLNCELHACEATCHDGKCKPCEHKVDQKCHCGKQDRQVACTRDSHEKKTYSCGKPCAKDLSCGNHKCKDCCHAVECRPCKLSPEIVTSCPCGKMPVVLEQRKSCLDAIPVCDGICDKTLRCGKAAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMLKCRQLSTRADDARCKKRCVKKRSCGKHKCKQECCIDIDHICPMPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVSCGTKRPPCKRPCSRRHPCDHPVQHSCHSAATCPPCMIFTTKWCFGQHEQRKIIPCSQESFSCGLACNKPLSCGRHKCIKPCHEGACQTPGEVCKQSCATVRAGCGHKCMAACHDGDCPDTACKEIVEVTCECGNRKQTRACHDFAREYRRIATAQLASSMAEVSRGNTIELSDILGPVKMNNNNKSIECNDECRTLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRGYAKKDPTLVKTIHDSLTHLVKLAKESKQKSRSHSFPIMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKEKSWLPAQSIMDVVQRESGQRRVPVPSNNAWGLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542617;
90% Identity: iTF_00725190;
80% Identity: -