Vbom035341.1
Basic Information
- Insect
- Volucella bombylans
- Gene Symbol
- stc
- Assembly
- GCA_949129095.1
- Location
- OX422141.1:23143025-23146291[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 4.8 9.3e+04 -4.1 1.6 15 19 348 352 347 352 0.81 2 14 0.19 3.7e+03 0.4 0.1 4 10 381 387 380 388 0.95 3 14 1.3e-05 0.26 13.7 16.4 4 19 395 410 393 410 0.93 4 14 2.7e-06 0.053 15.9 12.9 3 18 448 463 446 464 0.91 5 14 3.1 6.1e+04 -3.5 2.5 7 13 468 474 465 475 0.77 6 14 4.4e-07 0.0086 18.4 19.4 1 19 504 522 504 522 0.98 7 14 0.046 9e+02 2.4 17.5 4 18 570 584 563 585 0.86 8 14 0.016 3.2e+02 3.8 9.3 1 11 625 635 625 636 0.96 9 14 1.1e-08 0.00022 23.5 14.2 1 18 652 669 652 670 0.97 10 14 2.6 5e+04 -3.2 1.3 6 10 699 703 697 705 0.65 11 14 5 9.8e+04 -7.2 10.4 10 18 717 726 706 727 0.77 12 14 5.9e-08 0.0012 21.2 11.5 1 16 763 778 763 785 0.92 13 14 1e-06 0.02 17.2 12.6 1 18 795 813 795 814 0.89 14 14 1.2 2.3e+04 -2.1 0.6 7 12 829 834 823 834 0.68
Sequence Information
- Coding Sequence
- ATGTCCGACGCGTTCCATCGCTATCAAGACGGAGCTGGTGGCAGCGGTGGCAGTAGCACTAGCAATAACAATAACTACGTAAATTTCAATCAGTTCATGATGCAGCACAACATCATCGGTGGTGGGTCGAATGGAGCCCCGGAGAGTGATGGTGATGCACTGGCAGCTGCGTCGACGAATCCATTTCACTACAACGGCGGCTTTGGGCACCAGTATCAGATGGATGACTTTTACTTTGGTGGCGGAGGTGGCagtagtggtggtggtgtagGTTCTTCTGGAGGATTTTCGTTGTACAACTACCAGCCACACTACGATTTCTCAAATTCCAGGCTACATGCCAATGCTGCTGAGTTTGTCCCCCGTTTCTCCAATATGAGTCTGAGCGAAGCTATAAAAGCAAACGACGTGGCGCCGATATTAACTCCAACTCCCAGTGCAACTCTAACTCCATTTCTTACAGCAAATCCGAATCCCTTGGCAGCTGACATTCAGAATGCCAATACGAATGAAACTAACGGCCCATCCACGAGTAGGGCACGTCAGAATGATGTAGACTCACCGCCCGATAAGTCCCCACCGCAACGTTACACTGGTGCAACGAGTAAGAATCGTGAATCAACATCCAGAGCGGGTTCTGGTGTAGGTGCGTCATCTTCCCGCCGGCAGAATGGCCGTGACAATCGGAATCAGCGGTACGACAATCACCGCAGCAACAAGCGCCGAGATGACTGGAATAGGAATCGCGATCGTGTTAACGCCTTCCGGGAGGAGAAGTGCACCTTTGAAAATGGCAAAGACACTCCATTGAATTCGCCCGAAAAGAAATCGCCGAAAAAACCGATTCCCGAGAACGAGAAACTATCGCAGAGGGAGAAACTCATTCGGGAAATCGAATGCCGACGATTGGAGTGTCTAGTTTGTGTGGAGCAAATTAAGAGTCACAACTCGGTGTGGTCCTGTCACAACTGTTATCATATTCTCCATCTCAGCTGCATCATTAAGTGGGCATCGAGCTCCAAATCCCAGGATGGTTGGCGTTGTCCGGCGTGCCAAAATGTCGAGAAGGACGTGCCACGTGATTATTACTGTTTTTGTGGAAAAGTAAGGAATCCCACGTATAATCGCAGTGACATAGCGCACAGTTGTGGAGAGCTTTGTGGTCGCATTGAAGGCTGTCCTCATGCATGCACGCTGCTCTGTCATCCAGGCCCATGTCCTCCATGTCAGGCGCATGTGACAAGAAACTGCGGCTGTGGCAAAacaaccaagacaatgcaatgCTATCTGAAGGAGTCTATCGAATGCGATGCCCAGTGTCAGAAACTGCTTAACTGTGAATTGCATGCGTGCGAGGAGAAATGCCACGAGGGAAAGTGTAAGCCTTGTGAACACAAAGTCGATCAAAAATGTCACTGTGGCAAGCAAGATCGTCAGGTGGCATGTACAAGAGATTCTCATGAGAAGAAGGCCTACTCCTGTGGCAAGCCGTGCGGAAGAGATCTGAGCTGTGGCAATCACAAGTGTAAGGATTGCTGTCACACTGGAGAATGTCGTCCGTGTAAGTTTAGCCCTGAGGTGGTAACTTCCTGTCCCTGTGGCAAAATGCCGATCGTTTTGGAgcaaagaaaatcctgtttagATCCAATCCCAGTTTGTGATGGAACTTGTAACAAGACCCTACGTTGCGGCAAGCCAGCACACCCTCATCAGTGCGCTAGCAAATGTCATCATAGCAATTGCCCACCGTGCAACAAACAAACCGCCGTCAAGTGTCGTTGCGGCCATATGGACCAGATGATAAAATGCCGCCAGCTGTCAACCAGAGCTGACGATGCACGTTGCAAAAAACGTTGTGTGAAGAAGCGATCCTGCGGCAAACACAAATGCAACCAAGAGTGTTGCATCGATATTGATCACATTTGCCCGATGTCATGTAACTATACTCTATCCTGCGGCAAGCACAAGTGTGATCAACCATGCCATAGGGGTAACTGTCCTCGTTGCTATCGCAGCTCATTCGAGGAATTGTACTGCGAATGTGGAGCTGAAGTGATCTATCCCCCGGTGCCATGTGGCACAAAGAAACCGCCCTGCAAGCGCCCATGCTCACGCCAACACCCATGTGATCATCCAGTTCAACATAATTGCCATTCAGCAGCCAGTTGCCCACCGTGTATGATGTTCACCACGAAATGGTGCTTTGGGCAGCACGAACAGAGAAAAACCATTCCATGCAGCCAGGATAGCTTCAGCTGTGGCCTGGCGTGCAACAAGCCCTTAATTTGTGGTCGTCACAAGTGCATCAAATCATGTCACGAGGGTCCTTGTCAGGCGACAGGTGAAATCTGCAAGCAAAATTGCACAACAGTGAGGCCTAATTGCGGACATAAGTGCATGTCACCATGCCACGATGGGGACTGTCCGGAAACAGCGTGCAAAGAAATGGTGGAGGTAACTTGCGAGTGTGGTAATCGAAAGCAGCAGCGAGCTTGTCATGATTTCGCCCGAGAATACCGTCGAATCGCCACCGCACAACTGGCCACCTCAATGGCCGAAGTTCAACGTGGAAACACAATCGAGTTGCGCGACATTCTTGGACCAATCAAGATGAACAACAACAAAGCccTCGAGTGTAACGATGAATGCCGCACCATAGAACGCAATCGTCGCCTATCTATTGGTCTGCAAGTCCGCAATCCCGATTTGACACAAAAGCTACTCACCAAATATTCCGATTTCATTCGAAACTACGCCAAGAAAGATATAGTTCTTGTCAGATCCATCCATGATGCCCTAACCAATCTCGTTAAATTGGCCAAGGAAAGCAAGCAAAAGTCCCGCAGTCATTCATTTCCAACAATGAACCGCGAGAAGCGACAATTGGTGCATGAGATGTGCGAAATGTTTGGAGTCGAGTCGGTGGCTTATGatgcagaacccaatcggaatgTCGTGGCTACTGCCTACAAGGAGAAGTCTTGGTTGCCAGCACAAAGTATCATGGATGTCATACAACGTGAGAGTGGACAACGACGTGTTCCAGTGCCAAGCAACAATGCCTGGGGTTTTAAGAGATAA
- Protein Sequence
- MSDAFHRYQDGAGGSGGSSTSNNNNYVNFNQFMMQHNIIGGGSNGAPESDGDALAAASTNPFHYNGGFGHQYQMDDFYFGGGGGSSGGGVGSSGGFSLYNYQPHYDFSNSRLHANAAEFVPRFSNMSLSEAIKANDVAPILTPTPSATLTPFLTANPNPLAADIQNANTNETNGPSTSRARQNDVDSPPDKSPPQRYTGATSKNRESTSRAGSGVGASSSRRQNGRDNRNQRYDNHRSNKRRDDWNRNRDRVNAFREEKCTFENGKDTPLNSPEKKSPKKPIPENEKLSQREKLIREIECRRLECLVCVEQIKSHNSVWSCHNCYHILHLSCIIKWASSSKSQDGWRCPACQNVEKDVPRDYYCFCGKVRNPTYNRSDIAHSCGELCGRIEGCPHACTLLCHPGPCPPCQAHVTRNCGCGKTTKTMQCYLKESIECDAQCQKLLNCELHACEEKCHEGKCKPCEHKVDQKCHCGKQDRQVACTRDSHEKKAYSCGKPCGRDLSCGNHKCKDCCHTGECRPCKFSPEVVTSCPCGKMPIVLEQRKSCLDPIPVCDGTCNKTLRCGKPAHPHQCASKCHHSNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPMSCNYTLSCGKHKCDQPCHRGNCPRCYRSSFEELYCECGAEVIYPPVPCGTKKPPCKRPCSRQHPCDHPVQHNCHSAASCPPCMMFTTKWCFGQHEQRKTIPCSQDSFSCGLACNKPLICGRHKCIKSCHEGPCQATGEICKQNCTTVRPNCGHKCMSPCHDGDCPETACKEMVEVTCECGNRKQQRACHDFAREYRRIATAQLATSMAEVQRGNTIELRDILGPIKMNNNKALECNDECRTIERNRRLSIGLQVRNPDLTQKLLTKYSDFIRNYAKKDIVLVRSIHDALTNLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKEKSWLPAQSIMDVIQRESGQRRVPVPSNNAWGFKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01542617;
- 90% Identity
- iTF_01522263;
- 80% Identity
- -