Blap021267.1
Basic Information
- Insect
- Brachypalpus laphriformis
- Gene Symbol
- stc
- Assembly
- GCA_945910015.1
- Location
- CAMDTZ010000694.1:281149-284316[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.93 6.6e+04 -4.0 1.6 15 19 321 325 320 325 0.81 2 14 0.033 2.3e+03 0.6 0.4 4 10 354 360 353 360 0.95 3 14 2.7e-07 0.019 16.9 15.1 1 19 366 383 366 383 0.93 4 14 1 7.1e+04 -4.6 1.4 6 10 409 413 408 413 0.87 5 14 7.7e-07 0.055 15.4 12.9 3 18 421 436 419 437 0.91 6 14 0.38 2.7e+04 -2.8 1.4 8 13 442 447 441 448 0.79 7 14 1.6e-07 0.012 17.6 17.5 1 19 477 495 477 495 0.98 8 14 0.0047 3.4e+02 3.3 15.6 4 18 543 557 536 558 0.86 9 14 0.022 1.6e+03 1.2 12.3 1 11 598 608 598 620 0.91 10 14 2.2e-10 1.6e-05 26.7 15.5 1 18 625 642 625 643 0.97 11 14 0.5 3.6e+04 -3.2 1.3 6 10 672 676 670 678 0.65 12 14 1 7.1e+04 -6.0 10.2 10 18 690 699 679 700 0.78 13 14 3e-09 0.00021 23.1 11.6 1 16 736 751 736 758 0.92 14 14 2.8e-07 0.02 16.8 10.7 1 18 768 786 768 787 0.89
Sequence Information
- Coding Sequence
- ATGTCAGACGCGTTCCGTCGGTACCACGATGGAGCAGGAGTCAGTGGCAGCAGCAGCAGCACCAGCAACAACAATAATTATGTAAACTTCAACCAGTTCATGATGCAGCACAACATCATCGGTGGAGGCGGCGGTGCGAGTGGTGACGGAGTCGATGCAGTGGCTGTGTCTTCGACGAACCCATTCCACTACAACGGGAGCTATGGTCATCAGTATCAGATGGATGACTACTACTTTGGCGGAAGTGGAGGGGGTGGAGGTGGACAGTCCAACTACAACAACTACCAGCCGCGCTATAACTACACGAACTCTACACTGCACGCGACTGCGGCTGAGTTCATTCCAAGATTCTCTAACTTGTCGCTGGGTGAGGTTGGAGCCAAGGCGAATGATGTGGCATCAGCCCCGACACCGGTCGCAGCTGACGTTCAGAATGCCAATACCAATGGGGTTGGTGGTCCATCGACCAGCCACCATGTGGACTCGCCGTCAAATAAGTCTCCGCCGCAGCGGTACACAGGTGCAACGAGTAAGAACCGCGACTCAACTTCACGGGGTGGGGTCACATCATCCTCCCGGCGGCAAAACGGTCGGGACTACCACCGGAATCAACGGTACGACAATCACCGGAGCAACAAGCGCCGGGATGACTGGAATAGGAACCGCGACCGCGTGAACTCGTTCAGGGAGGAGAAGTACACCCTCGAGAACGGAAAGGACAGTCCGCTGAACTCGCCCGAGAAGAAGTCTCCTACAAAGCCACACCCTGAGAACGAGAAACTGTCGCAGAGGGAGAAACTCATCCGAGAGATTGAGGCACGCCGCCTGGAGTGTCTGGTGTGCGTGGAGCCAATCAAGAGCCACAACTCGGTGTGGTCGTGTCACAATTGCTACCACATACTCCACCTCAACTGCATCATCAAGTGGGCATCTAGTTCTAAGTCCCAGGACGGCTGGCGTTGTCCCGCTTGCCAAAATGTCGAGAAAGACGTGCCACGCGACTATTACTGCTTCTGCGGGAAGGTGAAGAGCCCTCAGTTCAATCGCAATGACATTGCGCATAGTTGCGGCGAAGTTTGCGCCCGAATCGAGGGGTGCTCACACGCATGCACTTTGCTATGCCATCCGGGACCGTGCCCGCCGTGTCAGGCCAACGTGACACGGGAATGTGGCTGTGGCAAGACTACCAAGACGATGCAATGCTACTTGAAGGAGTCCATCGAGTGCGAAGCCAAGTGTCAAAAAATACTCAACTGCGAGCTGCACTCATGCGAGGACAAGTGCCACGAGGGCAAGTGTAAGCCCTGCGAGCAGAAGGTCGATCAAAAGTGCCACTGTGGGAAGCAGGATCGTCAGGTGGCGTGCACACGCGACTCACACGAGAAAAAGACGTACTCCTGTGGCAAACCTTGTGGAAGAGATCTGAGCTGCGGGAACCATAAGTGCAAGGACTGTTGTCATGCTGGAGAATGCCGCACATGCAAGGTGAGCCCAGAAATGGTGACTTCATGCCCCTGTGGCAAGATGCCGGTGGTGCTGGAGCAGAGAAAGTCCTGCTTGGACCCTATTCCTGTCTGCGATGGCATTTGTAACAAGACACTGCGATGTGGCAAGGCAGCCCACCCCCATCACTGCACGAGTAAATGTCATCTGAGCAACTGTCCACCCTGTAACAAGCAGACAGCGGTCAAGTGCAGGTGTGGCCACATGGATCAAATGATAAAATGCCGTCAATTGTCGACCCGAGCTGACGATGCACGCTGCAAGAAGCGTTGCGCAAAGAAACGCTCATGTGGTAAGCACAAGTGCAACCAGGAGTGCTGCATAGACATTGACCACATCTGCCCGATGCCCTGCAACTATACGCTTTCGTGTGGAAAGCACAAGTGCGATCAGCCATGCCATCGGGGAAATTGTCCCCCTTGCTATCGGAGCTCCTTCGAGGAATTGTACTGCGAGTGTGGTGCAGAGGTGATTTATCCGCCGGTGCCATGCGGCACAAAGAAACCCCCTTGTAAGCGGCCATGCTCCCGTCAGCATCCCTGTGACCATCCAGTTCAGCACAATTGCCACTCGGCAGCTAATTGCCCGCCGTGCATGATGTTCACGACAAAATGGTGCTTTGGACAGCACGAGCAGAGGAAAACCATTCCATGCAGCCAGGAGAGCTTCAGCTGCGGCCTGGCATGCAACAAACCGCTCACATGTGGGCGGCACAAATGCATCAAGCCTTGTCATGAGGGCCCATGCCAGGCGGTGGGCGAGATCTGCAAGCAGAATTGCACAACAGTGCGGGGAGGATGTGGCCACAAGTGCATGGCGGCCTGTCACGATGGAGATTGTCCCGAAACCGCGTGCAAAGAAATGGTGGAGGTGACCTGTGACTGTGGGAATCGAAAGCAGATGCGTGCTTGCTATGACTTTGCTCGAGAATACCGGCGAATTGCCACAGCACAGCTAGCTTCCTCAATGGCTGAGGTACAACGCGGCAACACAATCGAACTGAGCGACATCCTGGGACCAGTTAAGATGAACAACAACAAAGCCCTTGAATGCAACGATGAGTGCCGCACTTTGGAGCGCAATCGTCGACTCGCCATCGGTCTGCAAATCCGCAATCCCGATCTGCCACAGAAGCTACTTACCAAATATTCCGATTTCATCCGAGGTTATGCGAAGAAGGATCCGACTCTAGTGAAAACCATCCACGACTCGCTCACTAATCTCGTCAAACTGGCCAAGGAGAGCAAACAGAAGTCGCGGAGTCATTCGTTTCCGACAATGAATCGCGAGAAACGCCAACTGGTGCATGAGATGTGCGAAATGTTTGGAGTCGAGTCGGTGGCTTACGATGCGGAGCCCAATCGGAATGTTGTCGCAACCGCTTACAAGGAAAAGTCCTGGTTACCAGCGCAGAGTATCATGGAAGTCATACAACGCGAAAGTGGACAGCGTCGCGTTCCGGTGCCAAGTAACAATGCATGGGGCATCAAGCGGTAG
- Protein Sequence
- MSDAFRRYHDGAGVSGSSSSTSNNNNYVNFNQFMMQHNIIGGGGGASGDGVDAVAVSSTNPFHYNGSYGHQYQMDDYYFGGSGGGGGGQSNYNNYQPRYNYTNSTLHATAAEFIPRFSNLSLGEVGAKANDVASAPTPVAADVQNANTNGVGGPSTSHHVDSPSNKSPPQRYTGATSKNRDSTSRGGVTSSSRRQNGRDYHRNQRYDNHRSNKRRDDWNRNRDRVNSFREEKYTLENGKDSPLNSPEKKSPTKPHPENEKLSQREKLIREIEARRLECLVCVEPIKSHNSVWSCHNCYHILHLNCIIKWASSSKSQDGWRCPACQNVEKDVPRDYYCFCGKVKSPQFNRNDIAHSCGEVCARIEGCSHACTLLCHPGPCPPCQANVTRECGCGKTTKTMQCYLKESIECEAKCQKILNCELHSCEDKCHEGKCKPCEQKVDQKCHCGKQDRQVACTRDSHEKKTYSCGKPCGRDLSCGNHKCKDCCHAGECRTCKVSPEMVTSCPCGKMPVVLEQRKSCLDPIPVCDGICNKTLRCGKAAHPHHCTSKCHLSNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCAKKRSCGKHKCNQECCIDIDHICPMPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPPCKRPCSRQHPCDHPVQHNCHSAANCPPCMMFTTKWCFGQHEQRKTIPCSQESFSCGLACNKPLTCGRHKCIKPCHEGPCQAVGEICKQNCTTVRGGCGHKCMAACHDGDCPETACKEMVEVTCDCGNRKQMRACYDFAREYRRIATAQLASSMAEVQRGNTIELSDILGPVKMNNNKALECNDECRTLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRGYAKKDPTLVKTIHDSLTNLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKEKSWLPAQSIMEVIQRESGQRRVPVPSNNAWGIKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01542617;
- 90% Identity
- iTF_00310688;
- 80% Identity
- -