Onob018830.1
Basic Information
- Insect
- Orthonevra nobilis
- Gene Symbol
- stc
- Assembly
- GCA_963555765.1
- Location
- OY743226.1:79701255-79704413[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.8 2.5e+04 -4.0 1.6 15 19 313 317 312 317 0.81 2 12 0.054 7.2e+02 0.9 0.2 4 10 346 352 345 353 0.95 3 12 5.1e-06 0.069 13.8 16.4 4 19 360 375 358 375 0.93 4 12 6.1e-07 0.0082 16.7 10.5 3 18 413 428 411 429 0.91 5 12 0.75 1e+04 -2.8 1.4 8 13 434 439 433 440 0.79 6 12 3.2e-07 0.0043 17.6 17.5 1 19 469 487 469 487 0.98 7 12 7.2e-05 0.96 10.1 16.7 4 18 535 549 528 550 0.86 8 12 0.043 5.7e+02 1.2 12.2 1 11 590 600 590 612 0.91 9 12 8e-10 1.1e-05 25.9 14.2 1 18 617 634 617 635 0.97 10 12 2 2.7e+04 -13.0 15.4 10 18 682 691 664 692 0.72 11 12 3.2e-08 0.00043 20.8 14.2 1 16 728 743 728 753 0.92 12 12 5.3e-07 0.0072 16.9 11.0 1 18 760 778 760 779 0.89
Sequence Information
- Coding Sequence
- ATGTCCGACGCATTTCATCGTTTCCACGACGGAGCTGATGGCAGCAGCAGCGCCGCGAGCAACAACAATTATGTAAACTTCAACCAGTTCATGATGCAGCACAATTTATTCAGCGGTGATAATGGTGGAGAAGCTGTAACTGAGGCGACGACCTCGTCCTCGATTAATCCATTCCAGTATCACAGCGGCTATGGCCGACAGCACCAAGTGGAAGACTATTTCTTCGGAGCTGGTGGTGGCGGAATGTCCGTGTATAATTATCAGCCGCAGTTCAACTACACAAATTCTACGCTCCATGCAACGGCGGCTGAGTTCGTGCCGAGGTTCTCCAATTTGTCTCTGGATGAGGCTGTGCCGCCCGCAGCAACATCGCGTCCTGTTGACTTCCAGAATGCCAATGGAACAAATGGGCCATCGACCAGCAGAGGCGAACCGCAGGCGCATGACGATTCTTCACCAAACAAGTCACCTCCGCAACGTTACTTTGGATCAGCAAGTAAAAGTCGCGATTCAACATTCCGAAGCAGCCTCGGGGCTGGTGCTTCTTCCTCGCGAAGGCAGAACGGACGTGACTATAACCGGAATCAGCGGTATGAGAACCATCGTAGTAACAAGCGTAGAGACGACTGGAATCGCAACCGCGAACGGGTAAATGCCTTCAGGGATGAGAAGTTCAATGTGGAGAATGGCAAAGACAGTCCGCAGACATCGCCCGAGAAGAAATCGCCACAAAAGCAGCATCCAGAGAACGAGAAATTGTCGCAACGGGACAAACTGATCCGTGAAATCGAAGTTCGTCGCCTCGAGTGTCTCGTCTGTGTTGAAGCAATCAAAAGTCACAACTCCGTATGGTCATGTCAGAACTGCTATCATATCCTTCACCTTAATTGCATCATCAAGTGGGCGTCCAGCTCCAAGTCTCAGGACGGTTGGCGTTGTCCTGCGTGCCAGAATGTCGAAAAAGATGTGCCACGCGACTATCTATGCTTTTGCGGCAAGGTGAAGGATCCAACGCTGAACCGCAACGAGATCGCGCACAGTTGCGGTGAAGTCTGCGGCCGTGTAGAGGGCTGTCCTCACGCCTGCACCCTGCTATGCCATCCCGGACCTTGTCCACCATGTCAAGCCAGCGTCACTCGAATGTGCGGCTGCGGAAGAACCACCAAGATCATGCAGTGCTATCTGAAGGAATCAATCGAATGCGGTGCCAAGTGCGAAAAACTTCTCAACTGCGAGCTGCACACGTGTGTGGATCTGTGTCACGAGGGAAAATGTAAGCCCTGCGACAACAAAGTCGATCAAAAGTGCCACTGCGGCAAGCAAGATCGCCAAGTCACCTGCACAAGGGACTCGCACGATAAAACAAGTTATTCCTGTGGCAAACCATGCGGACGGGATTTAACATGTGGGAATCACAAGTGCAAGGACTGTTGCCACGCTGGTGAATGTCGCACGTGCAAGTCGAGTCCCGAGATGGTCACTTCATGCCCCTGTGGAAAGATGCCCGTTGTTCTCGAGCAACGAAAGTCGTGCTTGGACCCCATTCCGGTCTGCGAAGGGGTTTGCGATAAGACCTTGCGCTGTGGAAAATCAGCCCATCCCCATCACTGCACCAGCAAATGCCACTTGGGCAACTGTCCCCCGTGCAACAAACAGACTGCAGTTAAATGTCGCTGCGGTCATATGGACCAGATGATCAAATGTCGTCAACTGTCGACCAGAGCTGACGACGCACGCTGCAAGAAGCGCTGCGTTAAGAAACGTTCGTGCGGGAAGCACAAATGCAACCAAGAATGCTGCATCGATATCGACCACATCTGCCCGATGCCCTGTAACTATACTCTCTCGTGCGGCAAGCACAAATGCGATCAATCGTGTCATCGGGGCAATTGCCCTCCATGCTATCGCAGCTCCTTCGACGAGTTGTATTGCGAATGCGGAGCTGAAGTGATTTATCCACCGGTGCCATGTGGCACAAAGCGTCCACCGTGCAAGCGCATGTGCTCGCGCCAACATCCTTGCGAACATCCGGTATCGCACAATTGCCATTCGGCGACCACTTGCCCGCCATGCGTGGTGTTCACCACGAAATGGTGTTTCGGCCAGCACGAGCAAAGGAAAACCATTCCATGCAGCCAGGAGAGCTTCAGCTGTGGTCTCGCCTGCAACAAACCGCTGTCTTGCGGACGCCACAAGTGCATCAAGCCATGCCATGAGGGACCATGCCAAGTCGCTGGCGAAATATGCAAGCAGAGCTGCACTACATTGAGGGCAGGTTGTGGCCACAAATGCATGGCGGCCTGCCACGAAGGAGACTGCCCCGAATCTGCTTGCAAGGAAATGgttGAAGTAATCTGTAAGTGTGGAAATCGAAAGCAATCTAGACCATGCTTCGACTTTGCACGTGAATACCGTCGGATTGCCACGGCGCAGTTGGCCTCGTCCATGGCTGAGGTCCATCGCGGCAACACAGTCGAATTGAGCGAAATCATGGGACCACTCAAGATGAACAGCAACAAGGCGCTTGACTGTAACGATGAATGCAAAACGCTGGAGCGCAACCGTCGGCTAGCGATTGGCCTGCAAATCCGTAATCCCGATGTGCAGCAAAAGCTACTAACCAAATATTCCGATTTCATTCGAGGCTACGCAAAGAAAGACCCGGCACTTGTGAAGAGCATCTACGACTCGCTGACAACTCTGGTTAAGCTGGCCAAGGAAAGCAAGCAGAAATCACGCAGCCACTCGTTCCCAACGATGAACAGGGACAAGCGGCACTTGGTACACGAGATGTGCGAGATGTTTGGCGTCGAATCGGTGGCCTACGATGCAGAACCCAATCGCAATGTTGTCGCAACTGCATACAGGGAAAAGtcATGGCTGCCAGCCCAGAGCATAATGGAGGTAATGCAACGTGAGAGTGGACAACGACGCGTCCCAGTGCCAAGTAACAATGCATGGGGCATCAAACGGTAG
- Protein Sequence
- MSDAFHRFHDGADGSSSAASNNNYVNFNQFMMQHNLFSGDNGGEAVTEATTSSSINPFQYHSGYGRQHQVEDYFFGAGGGGMSVYNYQPQFNYTNSTLHATAAEFVPRFSNLSLDEAVPPAATSRPVDFQNANGTNGPSTSRGEPQAHDDSSPNKSPPQRYFGSASKSRDSTFRSSLGAGASSSRRQNGRDYNRNQRYENHRSNKRRDDWNRNRERVNAFRDEKFNVENGKDSPQTSPEKKSPQKQHPENEKLSQRDKLIREIEVRRLECLVCVEAIKSHNSVWSCQNCYHILHLNCIIKWASSSKSQDGWRCPACQNVEKDVPRDYLCFCGKVKDPTLNRNEIAHSCGEVCGRVEGCPHACTLLCHPGPCPPCQASVTRMCGCGRTTKIMQCYLKESIECGAKCEKLLNCELHTCVDLCHEGKCKPCDNKVDQKCHCGKQDRQVTCTRDSHDKTSYSCGKPCGRDLTCGNHKCKDCCHAGECRTCKSSPEMVTSCPCGKMPVVLEQRKSCLDPIPVCEGVCDKTLRCGKSAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPMPCNYTLSCGKHKCDQSCHRGNCPPCYRSSFDELYCECGAEVIYPPVPCGTKRPPCKRMCSRQHPCEHPVSHNCHSATTCPPCVVFTTKWCFGQHEQRKTIPCSQESFSCGLACNKPLSCGRHKCIKPCHEGPCQVAGEICKQSCTTLRAGCGHKCMAACHEGDCPESACKEMVEVICKCGNRKQSRPCFDFAREYRRIATAQLASSMAEVHRGNTVELSEIMGPLKMNSNKALDCNDECKTLERNRRLAIGLQIRNPDVQQKLLTKYSDFIRGYAKKDPALVKSIYDSLTTLVKLAKESKQKSRSHSFPTMNRDKRHLVHEMCEMFGVESVAYDAEPNRNVVATAYREKSWLPAQSIMEVMQRESGQRRVPVPSNNAWGIKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01542617;
- 90% Identity
- -
- 80% Identity
- -