Mqua009304.1
Basic Information
- Insect
- Melangyna quadrimaculata
- Gene Symbol
- stc
- Assembly
- GCA_949320155.1
- Location
- OX439483.1:138028681-138042986[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.9 7.6e+04 -4.0 1.6 15 19 323 327 322 327 0.81 2 12 0.054 2.2e+03 0.9 0.2 4 10 356 362 355 363 0.95 3 12 5.5e-07 0.022 16.9 15.1 1 19 368 385 368 385 0.93 4 12 2.8e-06 0.11 14.6 12.3 3 18 423 438 421 439 0.91 5 12 1.3 5.3e+04 -3.5 3.1 8 13 444 449 440 452 0.68 6 12 1.2e-07 0.0048 19.0 18.6 1 19 479 497 479 497 0.98 7 12 0.00022 8.8 8.6 16.4 4 18 545 559 538 560 0.86 8 12 0.045 1.8e+03 1.2 12.3 1 11 600 610 600 622 0.91 9 12 4.4e-10 1.8e-05 26.7 15.5 1 18 627 644 627 645 0.97 10 12 2 8.1e+04 -9.6 12.6 10 18 692 701 678 702 0.67 11 12 3.5e-08 0.0014 20.7 14.6 1 16 738 753 738 763 0.88 12 12 4.4e-07 0.018 17.2 12.7 1 18 770 788 770 789 0.89
Sequence Information
- Coding Sequence
- ATGTCTGATGCATTCCATCATCGGTACCACGACGCAGGAGGACCTGGAAGCGGAAATAACAACTACATAGATTTCAATCAGTTTATGATGCAGCACAATATCATTCAAGGAGGTGGAAATGGTTCCGCCTCGGCGGCGTCTAATGTCAATGGAGGAGATATGGACCGAGGATCATCACCGAATCCTTTTCATTACAACGGAGGAGGCTACAATGGCTATCAGCCGGCGGCACAGCAAGCCGATGATTCTTATTACATGAACGGAGGAGGAACAGGTGGTTCCGGTAGATTGTCCAACTACACCCAACAACGCCAATCGAACTACTCCAATTCAAATCTTCATGCCAATGCAGCCGAGTTCGTCCCCAGATTTTCGAATCTTTCTCTCGGAGAATCCGGAGCTGCCTACAACTCCAATGACGTGTccgattttcaaaatgcaaaTAGTCCATCGACAAGTGAGAGACATGGCCACTCGCCAAAGTCTCCACCGCAGCGTTACACTGGTGCCACCAGTAAAAATCGTGAATCCACTTCTCGTGGTGGTTCCGGAGGTCCTGGTGCCTCTTCTCGGCGGCAGAATGGCCGAGACTACCAGCGAAATCAGCGATATGACAATCATCGAAGCAACAAGCGTCGCGACGACTGGAATAGAAATCGGGATCGATTGAACGCCTTCAGGGATGAGAAGTTCACTCTGGAGAATGGCAAGGACAGCCCACAGGCCTCACCCGAAAAGAAACTCTCACCCAAGAAGCCGGCAGCATTTCATGCCGAAAATGAGAAACTTTCTCAGCGCGAAAAACTGGTGCGAGAGATCGAGGGACGTCGTCTAGAGTGCCTGGTCTGCGTCGAGCTTATCAAGAGCCACAACTCGGTGTGGTCATGTCACAATTGCTATCACATCCTTCATCTGAATTGCATCATTAAATGGGCTTCTAGTTCAAAGTCGGAGGATGGCTGGCGTTGTCCAGCATGCCAAAACGTCGAGAAGGACGTTCCACGAGATTACTACTGCTTCTGTGGCAAAGTCAAGAGTCCGCAATTGAATCGCAACGACATAGCTCACTCTTGTGGCGAAGTGTGTGGACGCATCGAAGGCTGCTCACATGCCTGTACTTTGCTATGTCATCCCGGACCGTGTCCACCATGCCAGGCGAATGTTACACGTGAGTGCGGCTGTGGCAAGACTTCGAAGAGAATGCAGTGCTATTTGAAGGAGGCGATTGAGTGTGATGAGATTTGTCAGAAATTGCTCAATTGTGAGTTGCATGTGTGTGAGGAGAAGTGCCACGACGGCAAGTGTAAGCCGTGCGAGCATAAAGTTGATCAGAAGTGCCACTGTGGAAAACACGACAGACAGGTGGCTTGTACCCGTGACTCGCACGAAaaaaagaattactcttgcGGCAAGCCATGTGGAAGGGATCTTACTTGCGGGAATCACAAATGCAAGGACTGTTGTCATGCTGGCGAATGTCGTCCGTGCAAAGTAAGTCCCGAAGTGACAACATCATGTCCATGCGGTAAGATGCCGATAGTTTTGGAGCAAAGAAAATCCTGCCTGGACCCGATACCGGTGTGTGAAGGCATCTGCAACAAGACACTACGCTGCGGCAAGGCAGTCCATCCACATCATTGCACAACCAAGTGTCATTTGGGCAACTGTCCGCCGTGCAACAAACAAACAGCCGTCAAATGCCGCTGCGGTCACATGGACCAAATGATAAAATGCCGTCAGCTCTCGACCAGAGCCGATGATGCACGCTGCAAGAAGCGCTGCGTTAAAAAACGATCCTGCGGCAAGCACAAATGCAACCAAGAGTGCTGCATCGACATCGATCACATCTGCCCGATGCCCTGTAACTATACTCTCTCCTGTGGCAAGCACAAGTGCGACCAGCCATGCCATCGGGGAAATTGTCCTCCATGCTATCGCAGTTCATTCGAGGAGTTGTATTGCGAATGCGGTGCAGAGGTCATCTATCCACCGGTTCCCTGTGGCACTAAGAAACCAGTCTGTAAGCGCCATTGCTCGCGGCAGCATCCTTGCGAGCATCCAGTTCAACATAACTGCCATTCGGCGGCCACTTGCCCGCCGTGTATGATGTTCACCACCAAGTGGTGCTACGGACAGCACGAGCAGCGAAAAACCATTCCATGTGTCCAGGAGAGCTTCAGTTGTGGCCTGGCATGCAGCAAGCCGCTTTCCTGCGGTCGACACAAGTGCATCAAGCCCTGTCATGAGGGACCGTGTCAGGCGGCCGGAGAGGTTTGTAAGCAGAGTTGCACCACTCTGCGTGCAGGATGTGGCCATAAATGTATGGCGCCATGCCACGAAGGTGATTGCCCAGAGACGGCTTGTAAGGAGTTGGTTGAAATTACATGTGAGTGCGGCAACCGGAAGCAGACGCGGACTTGCCAGGATTTCTCCAGAGAGTACAGACGTATAGCTACGGCCCAGCTGGCTTCATCCATGGCTGAGGTGCAACGAGGCAACACTATCGAGCTAAGTGACATTCTAGGACCCGTCAAAATAAACAGTAACAAGGCACTTGAATGCAACGAAGAGTGCCGGACATTGGAACGCAATCGTCGCCTTGCCATCGGCTTGCAAATCCGTAATCCTGATCTGCCACAAAAGCTAACAACCAAATATTCTGATTTCATCCGCGGCTATGCTAAAAAAGACCCAGCTCTCGTTAAAAGCATTCATGACTCTCTCACCACTCTCGTCAAATTGGCCAAGGAGAGCAAGCAAAAGTCGCGTAGCCATTCATTTCCAACTATGAAACGAGAAAAACGCCAGTTAGTCCATGAGATGTGCGAGATGTTTGGTGTTGAGTCGGTGGCCTATGATGCAGAGCCGAATAGAAATGTAGTTGCTACGGCTTTTAAGGACAAGtcCTGGTTGCCAGCTACAAGTATCATGGAAGTTATTCAACGTGAAAGTGGACAAAGACGTGTTCCAGTACCGAGCAACAATGCCTGGGGCATAAAGCGATAA
- Protein Sequence
- MSDAFHHRYHDAGGPGSGNNNYIDFNQFMMQHNIIQGGGNGSASAASNVNGGDMDRGSSPNPFHYNGGGYNGYQPAAQQADDSYYMNGGGTGGSGRLSNYTQQRQSNYSNSNLHANAAEFVPRFSNLSLGESGAAYNSNDVSDFQNANSPSTSERHGHSPKSPPQRYTGATSKNRESTSRGGSGGPGASSRRQNGRDYQRNQRYDNHRSNKRRDDWNRNRDRLNAFRDEKFTLENGKDSPQASPEKKLSPKKPAAFHAENEKLSQREKLVREIEGRRLECLVCVELIKSHNSVWSCHNCYHILHLNCIIKWASSSKSEDGWRCPACQNVEKDVPRDYYCFCGKVKSPQLNRNDIAHSCGEVCGRIEGCSHACTLLCHPGPCPPCQANVTRECGCGKTSKRMQCYLKEAIECDEICQKLLNCELHVCEEKCHDGKCKPCEHKVDQKCHCGKHDRQVACTRDSHEKKNYSCGKPCGRDLTCGNHKCKDCCHAGECRPCKVSPEVTTSCPCGKMPIVLEQRKSCLDPIPVCEGICNKTLRCGKAVHPHHCTTKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPMPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRHCSRQHPCEHPVQHNCHSAATCPPCMMFTTKWCYGQHEQRKTIPCVQESFSCGLACSKPLSCGRHKCIKPCHEGPCQAAGEVCKQSCTTLRAGCGHKCMAPCHEGDCPETACKELVEITCECGNRKQTRTCQDFSREYRRIATAQLASSMAEVQRGNTIELSDILGPVKINSNKALECNEECRTLERNRRLAIGLQIRNPDLPQKLTTKYSDFIRGYAKKDPALVKSIHDSLTTLVKLAKESKQKSRSHSFPTMKREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAFKDKSWLPATSIMEVIQRESGQRRVPVPSNNAWGIKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01542617;
- 90% Identity
- iTF_00894449;
- 80% Identity
- -