Bscu047746.1
Basic Information
- Insect
- Brachyopa scutellaris
- Gene Symbol
- stc
- Assembly
- GCA_949775065.1
- Location
- OX459115.1:84656406-84659592[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.9 5.2e+04 -4.0 1.6 15 19 328 332 327 332 0.81 2 14 0.054 1.5e+03 0.9 0.2 4 10 361 367 360 368 0.95 3 14 5.5e-07 0.015 16.9 15.1 1 19 373 390 373 390 0.93 4 14 3.9e-06 0.11 14.1 12.4 3 18 428 443 426 444 0.91 5 14 0.76 2.1e+04 -2.8 1.4 8 13 449 454 448 455 0.79 6 14 0.0012 34 6.2 24.6 1 19 484 502 474 502 0.87 7 14 4.3e-05 1.2 10.8 16.2 4 18 550 564 543 565 0.86 8 14 0.045 1.2e+03 1.2 12.3 1 11 605 615 605 627 0.91 9 14 4.5e-10 1.2e-05 26.7 15.5 1 18 632 649 632 650 0.97 10 14 1.5 4.2e+04 -3.7 1.8 6 10 679 683 677 684 0.61 11 14 0.38 1e+04 -1.8 11.5 9 18 696 706 686 707 0.84 12 14 3.7e-08 0.001 20.6 14.2 1 16 743 758 743 768 0.92 13 14 7.6e-06 0.21 13.2 12.2 1 18 775 793 775 794 0.89 14 14 1.4 3.7e+04 -3.6 0.1 8 12 810 814 809 814 0.76
Sequence Information
- Coding Sequence
- ATGTCAGACGCGTTTCATAGGTATCATGATGGTGCTGGAGGCAATGGAGCCAGCAGCAGTACCGCCAACAATAACTATGTCAATTTCAGCCAGTTCATGATGCAGCACAATCTCATTGGTGCCGGTGGGAGTAATGGTAGCGGAGACGGTGGACTTGACGCAGTGGCTACGTCTTCGACAAATCCATTCCATTATAATGGTGACTATGGTAATCAATATCAAATGGATGACTACTACTTTGGCGGTGGAGGAACTGCAGTGACAACGAGTAACTACCAACCACGTCACAATTATTCAAATTCGACGCTTCACGCTGCCGCTGCTGAATTTGTTCCGAGATTTTCCAATTTGTCGCTGGGTGAGCCTGTCATCGGTGCAGTTAAAGAAAATAACGGTGCCCCTGCGCCAACTCCAATGACAGCTGACATTCAGAATGCTAATATAAACGGCACTGGTGGTCCATCTTCCAGCAAACCAGGACCGCAGCAAAATTATGGCGACTCGCAACTAAATAGGTCGCCTCCCCAGCGTTTCACTGGTTCAAAGAATCGTGATTCGTCATCACGCGGGGGCACTGGAGTTGGTTCCTCATCTTCTCGACGACAGAATGGTCGCGACTTTCACCGGAATCAACGGTATGAAAATCACCGTAGCAACAAGCGAAGGGACGACTGGAACAGGAACCGCGATCGTGTAAATTCTTTCCGGGATGAGAAGTACACCCTAGAGAACGGAAAAGACAGTCCACTGAACTCGCCGGAGAAGAAATCACCTAAAAAGCCGCATCCTGAGAACGAGAAACTGTCACAAAGGGAGAAGCTCATCCGAGAGATCGAGGCACGCCGCCTGGAGTGCCTTGTCTGCGTAGAAGCCATCAAGAGTCACAACTCAGTCTGGTCCTGCCACAATTGCTACCATATTCTTCATCTCAGCTGTATTATTAAGTGGGCATCCAGCTCGAAGTCTCAGGACGGCTGGCGCTGTCCTGCATGTCAGAATGTTGAGAAGGACGTGCCCCGTGACTATTACTGCTTCTGTGGTAAGGCTAAGAGTCCACAATTCAATCGCAACGATATCGCACACAGTTGTGGAGAAGTTTGTGGTCGAATCGAAGGCTGTTCTCACGCCTGCACTCTTCTATGTCACCCCGGACCATGTCCACCATGTCAAGCCAACGTCAAGCGAGAGTGTGGTTGTGGCAAAACCACAAAATCTATGCAGTGCTATCTGAAAGAGTCCATCGAGTGTGATGCCAAGTGTCAGAAGTTGCTCAACTGTGAGTTGCACTCGTGCGATGACAAGTGCCACGAGGGCAAGTGTAAGCCATGCGAACAGAAGGTTGATCAGAAGTGTCACTGCGGCAAGCAGGATCGTCAAGTAGCATGTACCAGAGATTCGCACGAGAAGAAGACGTATTCCTGCGGTAAACCTTGTGGAAGAGATCTATGTTGCGACAACCACAAGTGCAAGGACTGTTGTCACACTGGAGAGTGTCGTCCGTGCAAACTTAGCCCAGAAATGGTCACCTCCTGCCCCTGTGGCAAGATGCCAGTTGTTCTAGAGCAGAGAAAGTCGTGTTTGGATCCGATTCCCATCTGCGATGGCATCTGTAACAAAACACTACGATGTGGTAAAGCAGCGCATCCCCATCACTGCAGCAGTAAATGCCACTTGGGCAACTGTCCACCATGCAACAAGCAGACAGCTGTCAAGTGTAGATGTGGGCACATGGATCAGATGATAAAATGCCGCCAGTTGTCAACCAGAGCTGATGATGCACGCTGTAAGAAACGTTGCGTTAAGAAACGCTCATGTGGCAAACATAAATGCAACCAGGAGTGCTGCATCGATATTGACCATATTTGCCCGATGCCCTGCAACTACACTCTCTCGTGTGGCAAGCACAAGTGCGATCAGCCATGTCATCGGGGAAATTGTCCCCCATGCTATCGCAGCTCCTTCGAAGAGTTATATTGCGAGTGTGGAGCGGAGGTGATTTATCCGCCGGTGCCTTGTGGAACAAAGCGACCACCGTGCAAGCGTCCATGCTCTCGTCAACATCCCTGTGACCATGCGGTACAGCACAATTGTCACTCTGGACCCTCTTGTCCACCGTGTATGATGTTCACCACGAAATGGTGTTTCGGACAGCACGAGCAGCGAAAAACCATTCCATGCAGCCAGGAGAGCTTCAGCTGTGGCCTGGCATGCAACAAGCCGCTGACATGCGGACGCCACAAGTGCATCAAGCCATGTCATGAAGGGCCGTGCCAGGCGGTGGGCGAGATCTGCAAGCAGAGTTGCACTACAGTGAGGGTGGGTTGTGGACACAAGTGCATGGCGGCTTGTCATGGTGGCGACTGCCCTGAGACAGCGTGCAAGGAAATCGTAGAAGTAACTTGTGAATGTGGTAATCGAAAGCAGACGAGGGCATGCCATGATTTTGCTCGAGAATACCGACGTATTGCCACAGCACAGTTGGCTTCCTCAATGGCTGAGGTTCAACGTGGCAACACAATTGAACTGAGCGATATCCTCGGGCCAGTCAAGATGAACAACAACAAGGCTCTCGAATGCAACGATGAATGCCGTACGTTGGAGCGTAATCGCCGTCTTGCTATTGGTCTGCAAATCCGTAACCCCGATCTGCCACAGAAGCTACTTACCAAATATTCAGATTTCATTCGAGGTTACGCGAAGAAGGATCTAGTTTTGGTGAAAACCATTCACGACTCACTAACCAATCTTGTCAAACTAGCTAAGGAGAGTAAGCAAAAGTCACGGAGTCATTCGTTTCCCACCATGAATCGCGAGAAACGTCAACTGGTGCATGAGATGTGCGAAATGTTTGGAGTGGAGTCGGTGGCCTACGATGCGGAGCCCAATCGAAACGTCGTCGCAACAGCGTACAAGGAAAAGTCTTGGTTGCCAGCGCAAAGTATAATGGAAGTCATACAACGCGAAAATGGACAACGTCGTCCCCCGGTGCCAAGCAACAATGCATGGGGCCTCAAGAGATAG
- Protein Sequence
- MSDAFHRYHDGAGGNGASSSTANNNYVNFSQFMMQHNLIGAGGSNGSGDGGLDAVATSSTNPFHYNGDYGNQYQMDDYYFGGGGTAVTTSNYQPRHNYSNSTLHAAAAEFVPRFSNLSLGEPVIGAVKENNGAPAPTPMTADIQNANINGTGGPSSSKPGPQQNYGDSQLNRSPPQRFTGSKNRDSSSRGGTGVGSSSSRRQNGRDFHRNQRYENHRSNKRRDDWNRNRDRVNSFRDEKYTLENGKDSPLNSPEKKSPKKPHPENEKLSQREKLIREIEARRLECLVCVEAIKSHNSVWSCHNCYHILHLSCIIKWASSSKSQDGWRCPACQNVEKDVPRDYYCFCGKAKSPQFNRNDIAHSCGEVCGRIEGCSHACTLLCHPGPCPPCQANVKRECGCGKTTKSMQCYLKESIECDAKCQKLLNCELHSCDDKCHEGKCKPCEQKVDQKCHCGKQDRQVACTRDSHEKKTYSCGKPCGRDLCCDNHKCKDCCHTGECRPCKLSPEMVTSCPCGKMPVVLEQRKSCLDPIPICDGICNKTLRCGKAAHPHHCSSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPMPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRQHPCDHAVQHNCHSGPSCPPCMMFTTKWCFGQHEQRKTIPCSQESFSCGLACNKPLTCGRHKCIKPCHEGPCQAVGEICKQSCTTVRVGCGHKCMAACHGGDCPETACKEIVEVTCECGNRKQTRACHDFAREYRRIATAQLASSMAEVQRGNTIELSDILGPVKMNNNKALECNDECRTLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRGYAKKDLVLVKTIHDSLTNLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKEKSWLPAQSIMEVIQRENGQRRPPVPSNNAWGLKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01542617;
- 90% Identity
- -
- 80% Identity
- -