Waur006708.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Wasmannia auropunctata
Gene Symbol
ZNF236
Assembly
GCA_000956235.1
Location
NW:3391323-3412153[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 0.0003 0.022 14.7 1.7 2 23 182 203 181 203 0.96
2 27 9.8e-05 0.0072 16.2 0.6 1 23 209 231 209 231 0.98
3 27 2.4e-05 0.0018 18.1 0.3 2 23 237 258 237 258 0.97
4 27 0.0056 0.41 10.7 0.2 3 23 266 286 264 286 0.96
5 27 0.00012 0.0086 15.9 0.6 2 23 297 318 297 318 0.98
6 27 6.6e-07 4.8e-05 23.0 1.2 1 23 339 361 339 361 0.99
7 27 1.5e-05 0.0011 18.7 0.3 1 19 367 385 367 386 0.97
8 27 1e-05 0.00074 19.3 1.2 1 23 395 418 395 418 0.96
9 27 0.003 0.22 11.5 1.9 1 23 427 450 427 450 0.97
10 27 7.3e-07 5.3e-05 22.9 0.3 1 23 573 595 573 595 0.98
11 27 0.00046 0.034 14.1 0.8 1 23 601 623 601 623 0.99
12 27 0.0046 0.34 10.9 3.5 1 23 629 651 629 651 0.97
13 27 8.7e-05 0.0064 16.3 2.7 1 23 655 677 655 677 0.98
14 27 0.002 0.14 12.1 7.0 1 23 732 754 732 754 0.98
15 27 2.7e-05 0.0019 18.0 4.9 1 23 760 782 760 782 0.99
16 27 4.1e-06 0.0003 20.5 1.7 1 23 788 810 788 810 0.98
17 27 0.00037 0.027 14.4 8.7 1 23 816 838 816 838 0.98
18 27 1.6 1.2e+02 2.9 1.7 2 23 1194 1215 1193 1215 0.87
19 27 1e-05 0.00073 19.3 2.6 1 23 1221 1243 1221 1243 0.99
20 27 0.12 8.6 6.5 3.0 2 23 1250 1271 1249 1271 0.96
21 27 2.4e-08 1.7e-06 27.6 1.4 2 23 1341 1362 1340 1362 0.98
22 27 0.00019 0.014 15.3 4.9 1 23 1368 1390 1368 1390 0.99
23 27 0.00024 0.018 14.9 4.0 1 23 1396 1418 1396 1418 0.97
24 27 2.8e-05 0.0021 17.9 2.6 1 23 1424 1446 1424 1446 0.98
25 27 1.3e-06 9.9e-05 22.0 0.6 2 23 1685 1706 1684 1706 0.97
26 27 0.00011 0.0077 16.1 6.2 1 23 1712 1734 1712 1734 0.98
27 27 7.8e-05 0.0057 16.5 7.4 1 23 1740 1763 1740 1763 0.97

Sequence Information

Coding Sequence
ATGTTGACGGAACAGAATGTGATTATGGAGCTGACCGATTCCAGCGACACAGTGCCGATTGGTTTTATCACTACGGAAGACGGTCATACGATACTGGCAATAGGCGAACATGAGGACGGCACGCTTGAATTCATGACGACGCCAGTCACATTAATGCCACAAAATAACATGGTATCTCCGGCACTGATAAAGACTGTGgatggaaattttattttacagccGTCTGTTTTCCAATTGAATGTGGAGAATCTGTCAGGAACTGCGACGCAACAGACAAATCTACTACCGTTGATGCAACACTTTGAGAATGGATCCGCAATCACGGAGCAATTAAAAGTACAGGATACTAATGAGTGCTCAGTCACGGAATTTTTACCATCCATCAGAGATAACAGCAGTGTGTTGTCAGACAAAGGGCAGCCGACAGTTGAGAGCCGTGCTAAATGCAAGTCTACGTCCGTATCTACGATACAAAATGCACGCAAAAGATCTCCAGGAAGACCAAAAAAGACTGGAGTAACTTCGCAGAATGTGCAGTCTCTGAAGTGTGATATATGCAGGCAGGAGTTCACTAAGCAAACATTGTACCGCAGACACATGGAAAACCATGCCCAAGAGAAGCCACATAGATGTCCCAAATGTCCGGCATCGTTTAATATTCCAACAAATTTCACGCTTCATATGGCAACGCATAATACCGGTGACCCAAAATGCCCCGAATGCGGTAGGAAATACGCGAGGATGGCGAGTCTCAAGTCTCACATGTTGCTGCACGAGAAGGAGGAGAATCTCTTTTGCACGGAGTGCGAGGACGCCTTTTCGACGAAGGCCCAACTGGACGCGCATTTGAAGCTTCACGGAGAAAAGTGGGCGAGCGAGGATGTGCGAAAGTGCAAATTATGCAACAAACAATTCGTGCAGCCCGCGCTCTACCGGATGCACATTCGCGAGCATtacaggTTACAGACGAAGATAGTAAAGCAGACTAAGAGGGGAACGAAGCATAAAACAATGTACAAATGCACCATATGCTTGAAGACTTTCCAAAAACCGAGCCAACTGATGCGACACATCAGAGTGCATACGGGAGAAAAGCCTTTTAAGTGCACCGTCTGCAACCGGGCGTTCACGCAAAAGAGTTCGCTGCAAATCCACGCATGGCAACACAAGGGCATTCGGCCGCACACCTGCAGCCTCTGTAACGCCAAGTTCAGTCAGAAAGGAAACCTAAAGGCGCATATACTCAGAGTGCACAATGCACCAGAAGGCGAACCCACGTACGCGTGTTCATATTGTTCTTGCATCTTTAAGAAGCTAGGCAGTCTAAATGGACACATAAAGCGAATGCACTCTGTTTCCTCGGAGGAATCTGCCGCCAAATCCTTGGAAGCTAATTCTAGTATCTCGTCGGAAGCTGAGATGCGTGCGACCGTCGACAGCGTTATATCGCAACTGGCATCTTTGGAGTCCGCTGTGAATAATACTGTAAATTCCACAAAAACTACGACCTTAAGCGCGGAGCAGAATGATATCTTGCAGCAGGCATTAAAAAACAGCGGTTTGCCGAACAAAAACGAAGTTACTTCGAAAGAAACCATAGAACCGAAGAAGACGGATTCGCCAACGTCGTATGTCACGCTATTGGACAGAACCGCTGGTGGTACTtcgagGAAGTATCTCACTATAAAACAACGCTGCGTAGGAAACGTACGGTGGTATGCATGCTCGTTTTGCCCGAAAGAATTCAAAAAGCCGTCTGATTTGATACGTCATTTGCGCGTACATACCCAAGAGAAACCCTTCAAgTGTATGTATTGCGTGCGTTCTTTCGCGCTAAAATCGACAATGATAGCGCATGAGCGGACTCATACCGGAGTGAAGAAATACGCCTGCGATTCCTGCGACAAAACCTTTGCGTGCCACAGCAGTCTTACCGCTCATACGAGATTACACACAAAACCGCACAAGTGCAACATATGCGACAAGTCATTTAGTGCGAGCACCATCCTGAAAAATCATATGAAGAGCCACACCCGGGAGAAGCCCAAGATATCGCCCGAGGCGGAGAGCCTGGTGCCGCAGGTGGTGCTGCAAGAGCCGCTCGTCATCAGCGACGCCGGTAATAAAATCAGCGTGGCGCAGGTGCAGTCGAAGCAGAAACAATTGTACGAGAGCGTCGGCGTGGCCAGGCCGCACAAGTGTTGGGTCTGTCACGCGGCGTTCCGGAAAATCAGCCACTTGAAGCAACATTATCGTAGGCACACGGGCGAGCGTCCTTACAAGTGCTCCAAGTGCGACAGGAGATTTACATCGAACAGTGTCCTGAAATCCCATCTGCACACGCACGACGACGCGAGACCGTACAGTTGTTCGGTATGCGACACGAAATTCTCCACGCAGAGCAGCATGAAGAGGCACTTGGTCACGCATAGCAATAAAAGGCCGTACATGTGTCCGTACTGCCACAAGACGTTTAAGACGTACGTCAATTGCCGAAAGCACATGAAAAGACACAAGCACGAGCTGGCGCAGCGGCAATTGGATGAACAAAAGACGCAAGTGCAGAAGGATCAACAGCCCTTGAGCGAGAATAAAGAAGCTACCTCGACGTTACCGGAGAGCATCGCTCTCGCCGAAGATATGGAGGTGTCGTTCCAACCGCAAATGGCGCCGGATTTCACGCAGGCTTTCTCCGACCAGTTTCAAAATATCAGTgcggaaaaagaaaagtcCTTTTTACTGCCGGACAACGCAACGTCGATAGTGAATCaaaatttatctGTCGACGCAACTAACTTAGGAACGTCGCAAACTCTACACGCCGATGAAACCGGTACTATCACGCTACCTCATTACTCAGGAGATCAAACTCTCACGCCGGAAAGCATACGAGAGATCGAGGAGACTCTGAATCAGCAGCTGTTTAACATCGGCATGAATCTCGGGCTGGGAGCGAACGGTCTGCCGAGGCAGATGGACGAGGCGAACGCGAGTTCTCTCGACACATCCAGGGAACAACCGATgctcaatattatatatgagcaTAACAAGACTCTGGACTCGTCAGGCAATACCATATTCATGTCTCAATTCGATTCATTCGATATGAATCAAATTACGTTACAGGCGGATAACGATATAGACATCGGTTTAAATCCGAGCAACTCCACGAGTATATCCAGTATCTTGCCCAGATCCGTGGGAAGCAACCAGCAAGATGAGCAACGAGCTGCTCCAGCAACCACCGCCAGCAATATAGACGCTTCTCAGATCACGAGAAACACTCATCTGGTGGTGATAAGTCCTAAGGAGAATTGTTCGGAATTGGTGAAGCTCTCGCAGGTATGTCCGCCGAAGTACTCGAAAGTCATCGCGAAGGCGGATACCACAAACGGATCGGAGATGCAAGGCGTGAATGAACATGAGAAGACACCGCAGAAAAGTAACGCTGCGTCGTACGAAAACGAAAGAAATCCCTTGTTCATGAAGAACTTTCAAAGTGCAATGCAGCCGGAGACGCTTGTTTCTTCTGGCGTGACGGACGACCCGGCCGAAATATCGGAGTGTAGCACTCTGCTGCAGTGCCACATGTGCGGCGATCAAGGTTTCACGACAGAGAGATTGAAGGAACATCTGAAGTCCCATCGCGGTGCCAAAGAGTACGAGTGCTCGGAGTGTTCCCAGCGATTCTGCACGAACGGCGGTCTCAGCAGGCACATGAAGATGCACACGAACAAGCAGCGATGGAAATGCACGACCTGCCAGAAGATACTGGGCAGCAAACTGCAATTGAAGCATCACAACAAAATGCACACCGAGGCTTGGAATGTTTCGTCCATGGAGCCGGACAGCTCCCAGAAGGATCTCATCTCCTCCGGTCTACCGACGATAACGACGCTGAACGTCCGAGTAGATCCGAACTCGTCAGTTTCCGAGAAGGTTTTGATGGCCACGGTCGCCGAGAAGAGCATAGACTGCGCTGACGAGAATGTGAAGAAAGAGCCAAGGGAATACACTAATAAATGTAAGTACTGTCCGAAAACGTTCCGTAAACCAAGCGACCTCATCAGGCACATTCGCACGCACACGGGCGAACGACCGTACAAGTGCGAGCACTGCAGCAAGAGCTTCGCGGTCAAGTGCACTTTGGACTCGCATATGAAGGTCCACACGGGCAAGAAGACGTTCTGCTGCCACGTCTGCAGCAGCATGTTCGCTACGAAGGGCAGTTTAAAGGTCCACATGCGATTGCATACGGGCTCGAAACCGTTCAAGTGTCCCGTGTGCGATCTCCGATTCCGCACGTCGGGTCACAAGAAGGTACACATGCTGAAGCACGCGAGGGAGCACAAGGGCGGCGCGAAGCGCAAGCCGAAGCACTCGAAGATCGCCGCGGTGGCGGAAGCGGCGGCCAGCCTCGAGAAGATCGTTTCTCTGGATAATATGTCGATgaccacgacgacgacggcgaccgCTGCCGTGATCAACGACGAAGCCGCGCCATCGCAGCCTCTGGATTATCCCGCGTTGGAGCAGACGGTGAATCTCGATACCGCGGTGCACCTGCCGAATCAAATCGCGTTCAACCACGCCGACGCGACGTCGACGATTCTCAACAACAATTCCATCCTGTCCGTGAACGAGAACAACGAGCTGGTGGCGAATCTGCAGTTCTTGCTGGCGAACGGCCTCGTCACCATTCAAACGGACGACACTCTGCTGACGCCGCAGCCGGCGGCGAACGACGCCGCCGGAGTGCCGACCAACGTGATCGAGTTGGTCAATCCGGATCCCTTCCAGGAGGCCTGCAACCTGGGTAACGCCAGTCACGTGGTGATAACCAGCCAGGTGCCGACGGAGACGACGACCGCGGAGACGAGCAGCGCGACGGTCATTCAGATGAACGACTGCATGCCTCCTGTGTCCATGATACAGATGCAGACTCCGAGTACAAACGGCGCCGGTGTGTCCGAAGCGAGAACCAGCGATCaaatgacgatgacgacgacgacgacagcgGTGGCGAGGGCCGCGGCGCAGCCCTCCAAGAAGGAGTGCGACGTGTGCGGCAAAACGTTCATGAAACCGTACCAGCTGGAGCGGCACAGGCGCATTCACACGGGCGAGCGGCCGTACAAGTGCGAGCAGTGCGGCAAGTCGTTCGCGCAGAGGTTCACGCTGCATCTGCACCAGAAGCACCACACCGGCGACCGGCCGTACGCCTGCCCGCATTGCAAGCACATGTTCACGCAGAAGTGCAATCTGCAGACGCATCTCAGACGCGTCCACCAGCTGGTCATGCTCGACGTCAAGAAGCTGAAGAGCGGCCAGCAGATGCTGGGGGCGCTTCTGCAGGACAATCAGGACGGCGACACCAAGCTGCTGAACCTGGACGACATACTGGTGGTAGATTTTCTCAAGTGA
Protein Sequence
MLTEQNVIMELTDSSDTVPIGFITTEDGHTILAIGEHEDGTLEFMTTPVTLMPQNNMVSPALIKTVDGNFILQPSVFQLNVENLSGTATQQTNLLPLMQHFENGSAITEQLKVQDTNECSVTEFLPSIRDNSSVLSDKGQPTVESRAKCKSTSVSTIQNARKRSPGRPKKTGVTSQNVQSLKCDICRQEFTKQTLYRRHMENHAQEKPHRCPKCPASFNIPTNFTLHMATHNTGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRMHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKTFQKPSQLMRHIRVHTGEKPFKCTVCNRAFTQKSSLQIHAWQHKGIRPHTCSLCNAKFSQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRMHSVSSEESAAKSLEANSSISSEAEMRATVDSVISQLASLESAVNNTVNSTKTTTLSAEQNDILQQALKNSGLPNKNEVTSKETIEPKKTDSPTSYVTLLDRTAGGTSRKYLTIKQRCVGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACDSCDKTFACHSSLTAHTRLHTKPHKCNICDKSFSASTILKNHMKSHTREKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQVQSKQKQLYESVGVARPHKCWVCHAAFRKISHLKQHYRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDARPYSCSVCDTKFSTQSSMKRHLVTHSNKRPYMCPYCHKTFKTYVNCRKHMKRHKHELAQRQLDEQKTQVQKDQQPLSENKEATSTLPESIALAEDMEVSFQPQMAPDFTQAFSDQFQNISAEKEKSFLLPDNATSIVNQNLSVDATNLGTSQTLHADETGTITLPHYSGDQTLTPESIREIEETLNQQLFNIGMNLGLGANGLPRQMDEANASSLDTSREQPMLNIIYEHNKTLDSSGNTIFMSQFDSFDMNQITLQADNDIDIGLNPSNSTSISSILPRSVGSNQQDEQRAAPATTASNIDASQITRNTHLVVISPKENCSELVKLSQVCPPKYSKVIAKADTTNGSEMQGVNEHEKTPQKSNAASYENERNPLFMKNFQSAMQPETLVSSGVTDDPAEISECSTLLQCHMCGDQGFTTERLKEHLKSHRGAKEYECSECSQRFCTNGGLSRHMKMHTNKQRWKCTTCQKILGSKLQLKHHNKMHTEAWNVSSMEPDSSQKDLISSGLPTITTLNVRVDPNSSVSEKVLMATVAEKSIDCADENVKKEPREYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCEHCSKSFAVKCTLDSHMKVHTGKKTFCCHVCSSMFATKGSLKVHMRLHTGSKPFKCPVCDLRFRTSGHKKVHMLKHAREHKGGAKRKPKHSKIAAVAEAAASLEKIVSLDNMSMTTTTTATAAVINDEAAPSQPLDYPALEQTVNLDTAVHLPNQIAFNHADATSTILNNNSILSVNENNELVANLQFLLANGLVTIQTDDTLLTPQPAANDAAGVPTNVIELVNPDPFQEACNLGNASHVVITSQVPTETTTAETSSATVIQMNDCMPPVSMIQMQTPSTNGAGVSEARTSDQMTMTTTTTAVARAAAQPSKKECDVCGKTFMKPYQLERHRRIHTGERPYKCEQCGKSFAQRFTLHLHQKHHTGDRPYACPHCKHMFTQKCNLQTHLRRVHQLVMLDVKKLKSGQQMLGALLQDNQDGDTKLLNLDDILVVDFLK