Basic Information

Insect: Acromyrmex charruanus
Gene Symbol: ZNF236_1
Assembly: GCA_017607545.1
Location: JAANIC010000615.1:1955875-1971211[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00016 0.0085 15.6 0.7 2 23 182 203 181 203 0.96

2 25 0.0001 0.0052 16.2 0.6 1 23 209 231 209 231 0.98

3 25 2.5e-05 0.0013 18.1 0.3 2 23 237 258 237 258 0.97

4 25 0.0058 0.3 10.7 0.2 3 23 266 286 264 286 0.96

5 25 0.00012 0.0063 16.0 0.6 2 23 297 318 297 318 0.98

6 25 6.3e-07 3.3e-05 23.2 0.9 1 23 337 359 337 359 0.99

7 25 2.8e-05 0.0015 17.9 0.2 1 19 365 383 365 384 0.97

8 25 2.2e-05 0.0011 18.3 0.7 1 23 393 416 393 416 0.95

9 25 0.00026 0.014 14.9 1.8 1 23 425 448 425 448 0.97

10 25 7.5e-07 3.9e-05 22.9 0.3 1 23 570 592 570 592 0.98

11 25 9e-05 0.0047 16.4 2.7 1 23 616 638 616 638 0.98

12 25 0.0063 0.33 10.6 6.0 1 23 693 715 693 715 0.97

13 25 2.7e-05 0.0014 18.0 4.9 1 23 721 743 721 743 0.99

14 25 4.2e-06 0.00022 20.6 1.7 1 23 749 771 749 771 0.98

15 25 0.00038 0.02 14.4 8.7 1 23 777 799 777 799 0.98

16 25 1.3 65 3.3 1.3 2 23 1149 1170 1148 1170 0.87

17 25 0.00014 0.0071 15.8 3.7 1 23 1176 1198 1176 1198 0.99

18 25 0.044 2.3 7.9 1.1 2 23 1205 1226 1204 1226 0.96

19 25 2.5e-08 1.3e-06 27.6 1.4 2 23 1301 1322 1300 1322 0.98

20 25 7.7e-05 0.004 16.6 5.0 1 23 1328 1350 1328 1350 0.99

21 25 0.0023 0.12 12.0 3.9 1 23 1356 1378 1356 1378 0.97

22 25 0.00029 0.015 14.8 3.1 1 23 1384 1406 1384 1406 0.99

23 25 2.7e-06 0.00014 21.2 0.6 2 23 1640 1661 1639 1661 0.97

24 25 0.00011 0.0057 16.1 6.0 1 23 1667 1689 1667 1689 0.98

25 25 0.00036 0.019 14.5 7.8 1 23 1695 1718 1695 1718 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00016	0.0085	15.6	0.7	2	23	182	203	181	203	0.96
2	25	0.0001	0.0052	16.2	0.6	1	23	209	231	209	231	0.98
3	25	2.5e-05	0.0013	18.1	0.3	2	23	237	258	237	258	0.97
4	25	0.0058	0.3	10.7	0.2	3	23	266	286	264	286	0.96
5	25	0.00012	0.0063	16.0	0.6	2	23	297	318	297	318	0.98
6	25	6.3e-07	3.3e-05	23.2	0.9	1	23	337	359	337	359	0.99
7	25	2.8e-05	0.0015	17.9	0.2	1	19	365	383	365	384	0.97
8	25	2.2e-05	0.0011	18.3	0.7	1	23	393	416	393	416	0.95
9	25	0.00026	0.014	14.9	1.8	1	23	425	448	425	448	0.97
10	25	7.5e-07	3.9e-05	22.9	0.3	1	23	570	592	570	592	0.98
11	25	9e-05	0.0047	16.4	2.7	1	23	616	638	616	638	0.98
12	25	0.0063	0.33	10.6	6.0	1	23	693	715	693	715	0.97
13	25	2.7e-05	0.0014	18.0	4.9	1	23	721	743	721	743	0.99
14	25	4.2e-06	0.00022	20.6	1.7	1	23	749	771	749	771	0.98
15	25	0.00038	0.02	14.4	8.7	1	23	777	799	777	799	0.98
16	25	1.3	65	3.3	1.3	2	23	1149	1170	1148	1170	0.87
17	25	0.00014	0.0071	15.8	3.7	1	23	1176	1198	1176	1198	0.99
18	25	0.044	2.3	7.9	1.1	2	23	1205	1226	1204	1226	0.96
19	25	2.5e-08	1.3e-06	27.6	1.4	2	23	1301	1322	1300	1322	0.98
20	25	7.7e-05	0.004	16.6	5.0	1	23	1328	1350	1328	1350	0.99
21	25	0.0023	0.12	12.0	3.9	1	23	1356	1378	1356	1378	0.97
22	25	0.00029	0.015	14.8	3.1	1	23	1384	1406	1384	1406	0.99
23	25	2.7e-06	0.00014	21.2	0.6	2	23	1640	1661	1639	1661	0.97
24	25	0.00011	0.0057	16.1	6.0	1	23	1667	1689	1667	1689	0.98
25	25	0.00036	0.019	14.5	7.8	1	23	1695	1718	1695	1718	0.98

Sequence Information

Coding Sequence: ATGTTGACGGAACAGAATGTGATTATGGAACTAACTGGTTCTAGTGATACAGTGATTGGTTTTATTACTACCGATGACGGTCATGCGCTACTGATAGTAGATGaacgTGAGGACGGTACACTAGAATTTATGACAACACCAATCACATTTATGCCACAGAATAACATGGTATCTCCAACATTGATAAAGACGGAGGacggaaattttattttacattcgcCTATTTTCCAAATGAATGTGCAGGGTCTGTCGGGAACTGCGATGCAACAAACAAATCTACTGCCACGGATGCAATATTTAGAAACTAGATCTGCAATTACGGAACAATTAAAAGTACAAGATACGAATGAATGTGCAGTTACAGAATATCTATTACCTATTAGAGATAATAACAGTGTGTTATCAGACAAAGGACAATTGACAATTAACAATCATACTAAAAGCAAATCTACGCCTGTATTTAATACTGTACAAAACGTCTACAAAAGATCTCCAGGGAGACCAAAGAAGAACGAAGTAAATCCGCAaaaTACGCAGTTTCTGCAGTGTGATATATGCAGTCAAGAATTTACTAAACAAGCATTATACCGTAAACATATGGAAAATCATGCCGAAGAAAAACCGCATAGATGTCCTAAATGTCCAGCATCATTTAATATTCCAACAAATTTCACGCTTCATATGGCAACGCATAATACCGGTGACCCAAAATGCCCCGAATGCGGTAGGAAATATGCTAGAATGGCGAGTCTCAAGTCTCATATGTTGCTGCACGAAAAGgaggaaaatctcttttgCACGGAGTGTGAGGATGCCTTTTCGACGAAGGCCCAATTGGATGCGCATTTAAAACTTCACGGAGAAAAGTGGGCGAGCGAGGATGTGCGGAAATGCAAATTATGCAACAAACAATTCGTGCAGCCCGCACTCTACCGAATGCACATTCGCGAGCATTACAGGACGAAGATAGTAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTACAAATGTACCATATGTTTGAAGACTTTCCAAAAACCGAGCCAATTAATACGACATATCAGAATACATACCGGAGAAAAGCCCTTTGAGTGTACGGTCTGCAACAGGGCGTTTACGCAAAAAAGTTCGCTACAAATCCATGCATGGCAACACAAGGGCATTCGGCCACATGCCTGCAGTCTCTGTAACGCCAAGTTTAGTCAGAAAGGAAATTTAAAGGCGCATATACTCAGAGTGCATAATGCACCAGAAGGTGAATCAACGTATGCGTGTTCCTATTGTTCCTGCGTCTTTAAGAGGCTGGGCAGTTTAAATGGACACATAAAGCGAATGCATTCTGTTACCTCGGAGGAATTTAGCGCAAAATCCTCAGAAACTAATCCTATCTCGTCGGAAGCTGAAATGCGCGCGACCGTCGACAGTGTTATATCACAATTGGCATCTTTGGAATCTGTTGTGAATAATACAGCAGATTCCACAAAAACTACGACCTTAAGTGCAGAACAGAATGATATTTTGCAACAGGCATTAAAAAACAGCGGTTTACCAAACAAAAACGATGTCATTCTGAAAGAAACCGCAGAACCAAAAAAGACTGATTCATCAACGTCGTATGTCACGCTAGTAGACAGAACTGCTGGTGGTACTTCGagGAAGTATCTCACTATAAAACAACGCTGCGTAGGAAACGTACGGTGGTATGCGTGTTCATTTTGCCCAAAAGAATTCAAAAAGCCGTCGGATCTGATACGTCATTTGCGCGTACACACCCAAGAGAAACCCTTCAAgtttattttgtttgaaaatgtAGATTGCgatcacTTACACACGAAACCGCACAAGTGCAATATATGCGACAAATCATTTAGCGCAAGCACCATTCTAAAAAATCACATGAAAAGCCACACGCGGGAGAAGCCCAAGATATCGCCGGAAGCGGAAAGTTTGGTGCCACAAGTGGTACTGCAAGAACCACTTGTCATTAGTGACGCTGGTAATAAAATCAGCGTGGCACAGGTGCAGTCAAAACAGAAACAATTATACGAAAATGTCGGCGTGACCAGACCGCATGAATGTTGGGTTTGTCACGCGGCATTCAGGAAAATTAGTCATTTGAAGCAACATTTTCGCAGGCATACAGGCGAACGTCCTTACAAATGTTCCAAATGCGATAGGAGATTCACATCGAACAGTGTTCTGAAATCTCACTTACATACGCACGATGATACGAGGCCATACAGTTGTTCTGTGTGCGACACGAAATTCTCCACGCAGAGCAGCATGAAGAGACATTTGGTCACACATAGCAATAAAAGGCCATACATGTGTCCATACTGTCACAAAACGTTTAAGACATATGTCAATTGCCGAAAGCACATGAAGAGACACAAACATGAACTGGCACAACGGCAATTGGAAGAACAAAAGATGCAAGCTCAGAAAGATTCACAGCCTTCGAGCGAAGCTAAGGAAGCTACATCATCATTATCGGAGAGCATCACTCTCACCGAAGATATGGAGGTGTCCTTTCAACCGCAAATGGCACCAGATTTTACGCAGGCTTTCTCTGATCAGTTTCAAAATATCAACacggagaaagaaaaatcctTTTTACTACCGGACAATACAACGCCATCGATGGTGAATCaaaatttatcTGTCGACACAACTAATTTAGGAACGTCGCAAACTTTACACGCCGATGAAACTGGTACTATCACGTTACCTAATTACTCAGGGGATCAAACTTTCACGCCGGAAAGTATACGAGAGATAGAGGAAACTCTAAATCAGCAGTTATTCAACATGGGCATGAATCTTGAGCTGGGAACAAACAATTTGCCGAGGCAGATGGACGAAGCGAACACAAATTCCAGAGAACAGCCAGTgctcaatattatatatgaacacAACAAATCTCTGGAATCGTCAGGCAATACTATATTCATGTCGCAATTTGATTCATTTGATATGAATCAAATAACATTGCAGACGGATAACGATATAGACATTGGTTTAAATCCGAGCAACTCTATGAGTATGTCCAGTATTTTGCCCAGATCCATGGGAAGTCAACAAGAGAAACAAGCTATTCCAGTTACTACAGCTAGCAATGTAGACACTTCTCAAATTACGAGAAATACTCATCTGGTGGTAATAAATCCTAAGGAAAATTGTTCGGAATTAGTGAGACTTTCGCAAGTATGCCCGTCGAAGTACTCAAAAGTCATCGCGAAAGCGGATACCACAAATGGATCGGAGATGCAAGGCATGAATGAGCATGAAAAGGCATCACAAAAAAGTAATGTTAAGTCGTGTGaaaacgaaagaaatttttttatGAAGAATTTTCAAAGTACAATGCCATCGAAGACACTTATTTCATCTGGCATAACGGACAACTCAGCCAAAATATCGCAATGTAACACTCTGCTGCAATGTCACGTGTGTGGCGATCAAGGTTTCACGACAGAGAGATTGAAGGAACATTTGAAATCTCATCGCGGTGACAAAGAGTATGAATGTTCCGAGTGTTCCCAGCGATTCTGCACGAACCGCGGTCTCAGTAAGCACCTGAAGATGCACATGAACAAGCAGCGATGGAAATGCACGATATGTCAGAAAGTACTGGATAGCAAACTGCAAATGAAATATCACAGCAAAATGCACACCACAACTTGGAATGTTTCGTCTATGGAGCCGGATAGCTCTCAGAAGAATGTTATTTCCTCGAGTTCCGGTTTACCATCCGATCTAACAACACTGGATGTCCGAGCAGATTCAAACCCGTCAGTTTCCGAGAAGGTTTTGATGGCCGCAGTCGCCGAGAAAAAAAGCATGGACCGCGCTGATGAAAATATAGTGAAGAAAGAAATAAGGGAATACACTAATAAATGTAAGTACTGCCCGAAAACTTTCCGTAAACCAAGCGATCTCATCAGGCATATTCGCACGCATACGGGTGAACGACCTTACAAGTGTGATCACTGCAACAAAAGCTTCGCGGTCAAGTGTACTTTGGACTCGCACATGAAGGTTCACACGGGCAAGAAGACATTCTGCTGCCACGTCTGTAGCAGCTTGTTCGCTACAAAGGGCAGTTTGAAGGTTCACATGCGATTGCATACAgGTTCGAAACCATATAAATGTCTCGTGTGTGATCTTCGATTCCGTACTTCGGGTCACAAGAAGGTACATATGTTGAAGCACGCAAGGGAGCATAAGGGTGGCGTAAAACGCAAGCCGAAACACTCCAAGGTCGCTGCGGTGGCGGAAGCAGCGGCGAGCCTTGAAAAACTCGGCAATAGTTCTCTTGATAATGCGTCAACAACGACGACTACTGCCATAATCAGCGATGAAGCCGCGCCGTCGCAGAATCTGAATTATCCCACGTTAGAGCAAACAGTGAATCTCGGTACTGCGGTTCATCTACCGAATCAAATCGCGTTTAATCATACCGACACCACGACAATCCTCAATAACAATTCCATACTATCTGTGAACGAAAACAACGAACTAGTCGCGAATCTGCAGTTTTTGTTAGCAAATGGTCTCGTAACTTTTCAAACGGACGATACCCTGCTGACGCAATCAACGACAAACAGTTCCGATGCTACCGGCGCCGGAATGCCAACTAACATGATCGAGTTAGTTAATCCGGATCCTTTTCAGGAAGCTTGCAACTTGGGTAACACCAATCACGTGGTGATAAGTCAGGTGCCAGGGGAGACAACGACCGCGGATACGAGCAACACGGCAGTTATTCAGATGAACAATTGTATGCCTCCTGTGCCTATGGTACAAATTCAGACTCAAGATACAAATAGCGTCGGTGTGTTTGAAGCAAAAACGAGTAATCAAACGACGACAGTAACTATGGCGAAAGCTTCGGCGCAGCCTTCAAATAAGGAGTGCGATGTATGCGGAAAAACATTCATGAAACCGTATCAATTGGAACGACACAAACGTATTCATACAGGCGAAAAACCGTTCAAGTGCGAACAGTGCGGCAAGTCGTTTGCGCAAAAATTTACGCTGCATCTGCATCAGCAGCACCACACCGGTGATCGGCCGTACTCTTGTCCGCACTGCAAGCGCCTTTTCACGCAAAAATGCAACTTACAGACACATCTGAAACGCTTCCATCAGACGGTCATGCTCGATGTTAAAAAACTGAAGAGTGGCCAGCAGATGTTAGGCACACTTCTACAAGACAATCAAGGCGCCACTACCAAGCTGCTAAATCTGGACGACATACTGGTGGTAGATTTTCTCaag
Protein Sequence: MLTEQNVIMELTGSSDTVIGFITTDDGHALLIVDEREDGTLEFMTTPITFMPQNNMVSPTLIKTEDGNFILHSPIFQMNVQGLSGTAMQQTNLLPRMQYLETRSAITEQLKVQDTNECAVTEYLLPIRDNNSVLSDKGQLTINNHTKSKSTPVFNTVQNVYKRSPGRPKKNEVNPQNTQFLQCDICSQEFTKQALYRKHMENHAEEKPHRCPKCPASFNIPTNFTLHMATHNTGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRMHIREHYRTKIVKQTKRGTKHKTMYKCTICLKTFQKPSQLIRHIRIHTGEKPFECTVCNRAFTQKSSLQIHAWQHKGIRPHACSLCNAKFSQKGNLKAHILRVHNAPEGESTYACSYCSCVFKRLGSLNGHIKRMHSVTSEEFSAKSSETNPISSEAEMRATVDSVISQLASLESVVNNTADSTKTTTLSAEQNDILQQALKNSGLPNKNDVILKETAEPKKTDSSTSYVTLVDRTAGGTSRKYLTIKQRCVGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKFILFENVDCDHLHTKPHKCNICDKSFSASTILKNHMKSHTREKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQVQSKQKQLYENVGVTRPHECWVCHAAFRKISHLKQHFRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDTRPYSCSVCDTKFSTQSSMKRHLVTHSNKRPYMCPYCHKTFKTYVNCRKHMKRHKHELAQRQLEEQKMQAQKDSQPSSEAKEATSSLSESITLTEDMEVSFQPQMAPDFTQAFSDQFQNINTEKEKSFLLPDNTTPSMVNQNLSVDTTNLGTSQTLHADETGTITLPNYSGDQTFTPESIREIEETLNQQLFNMGMNLELGTNNLPRQMDEANTNSREQPVLNIIYEHNKSLESSGNTIFMSQFDSFDMNQITLQTDNDIDIGLNPSNSMSMSSILPRSMGSQQEKQAIPVTTASNVDTSQITRNTHLVVINPKENCSELVRLSQVCPSKYSKVIAKADTTNGSEMQGMNEHEKASQKSNVKSCENERNFFMKNFQSTMPSKTLISSGITDNSAKISQCNTLLQCHVCGDQGFTTERLKEHLKSHRGDKEYECSECSQRFCTNRGLSKHLKMHMNKQRWKCTICQKVLDSKLQMKYHSKMHTTTWNVSSMEPDSSQKNVISSSSGLPSDLTTLDVRADSNPSVSEKVLMAAVAEKKSMDRADENIVKKEIREYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCNKSFAVKCTLDSHMKVHTGKKTFCCHVCSSLFATKGSLKVHMRLHTGSKPYKCLVCDLRFRTSGHKKVHMLKHAREHKGGVKRKPKHSKVAAVAEAAASLEKLGNSSLDNASTTTTTAIISDEAAPSQNLNYPTLEQTVNLGTAVHLPNQIAFNHTDTTTILNNNSILSVNENNELVANLQFLLANGLVTFQTDDTLLTQSTTNSSDATGAGMPTNMIELVNPDPFQEACNLGNTNHVVISQVPGETTTADTSNTAVIQMNNCMPPVPMVQIQTQDTNSVGVFEAKTSNQTTTVTMAKASAQPSNKECDVCGKTFMKPYQLERHKRIHTGEKPFKCEQCGKSFAQKFTLHLHQQHHTGDRPYSCPHCKRLFTQKCNLQTHLKRFHQTVMLDVKKLKSGQQMLGTLLQDNQGATTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_01477787;
80% Identity: -