Basic Information

Insect: Tetramorium immigrans
Gene Symbol: ZNF236
Assembly: GCA_011636585.1
Location: VBVO01001120.1:21374-28721[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00013 0.017 16.2 0.6 2 23 53 74 53 74 0.98

2 23 2.1e-06 0.00026 21.8 0.7 1 23 95 117 95 117 0.99

3 23 9.6e-06 0.0012 19.7 1.0 1 20 123 142 123 145 0.95

4 23 1.1e-05 0.0014 19.5 1.2 1 23 151 174 151 174 0.96

5 23 0.0033 0.42 11.7 1.9 1 23 183 206 183 206 0.97

6 23 8.2e-07 0.0001 23.1 0.3 1 23 328 350 328 350 0.98

7 23 0.00052 0.065 14.3 0.8 1 23 356 378 356 378 0.99

8 23 0.013 1.6 9.9 3.6 1 23 384 406 384 406 0.97

9 23 9.9e-05 0.012 16.6 2.7 1 23 410 432 410 432 0.98

10 23 0.0017 0.22 12.6 5.8 1 23 487 509 487 509 0.98

11 23 3e-05 0.0038 18.2 4.9 1 23 515 537 515 537 0.99

12 23 4.7e-06 0.00058 20.7 1.7 1 23 543 565 543 565 0.98

13 23 7.2e-05 0.009 17.0 6.0 1 23 571 593 571 593 0.98

14 23 1.9 2.3e+02 3.1 1.7 2 23 945 966 944 966 0.87

15 23 1.7e-05 0.0021 19.0 2.7 1 23 972 994 972 994 0.98

16 23 0.021 2.7 9.2 1.9 2 23 1001 1022 1000 1022 0.97

17 23 2.7e-08 3.4e-06 27.8 1.4 2 23 1096 1117 1095 1117 0.98

18 23 0.00021 0.026 15.5 4.9 1 23 1123 1145 1123 1145 0.99

19 23 0.00028 0.035 15.2 4.0 1 23 1151 1173 1151 1173 0.97

20 23 3.2e-05 0.004 18.1 2.6 1 23 1179 1201 1179 1201 0.98

21 23 2.1e-05 0.0026 18.7 0.7 2 23 1437 1458 1436 1458 0.97

22 23 6.1e-06 0.00076 20.4 4.2 1 23 1464 1486 1464 1486 0.98

23 23 0.0023 0.29 12.2 8.8 1 23 1492 1515 1492 1515 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00013	0.017	16.2	0.6	2	23	53	74	53	74	0.98
2	23	2.1e-06	0.00026	21.8	0.7	1	23	95	117	95	117	0.99
3	23	9.6e-06	0.0012	19.7	1.0	1	20	123	142	123	145	0.95
4	23	1.1e-05	0.0014	19.5	1.2	1	23	151	174	151	174	0.96
5	23	0.0033	0.42	11.7	1.9	1	23	183	206	183	206	0.97
6	23	8.2e-07	0.0001	23.1	0.3	1	23	328	350	328	350	0.98
7	23	0.00052	0.065	14.3	0.8	1	23	356	378	356	378	0.99
8	23	0.013	1.6	9.9	3.6	1	23	384	406	384	406	0.97
9	23	9.9e-05	0.012	16.6	2.7	1	23	410	432	410	432	0.98
10	23	0.0017	0.22	12.6	5.8	1	23	487	509	487	509	0.98
11	23	3e-05	0.0038	18.2	4.9	1	23	515	537	515	537	0.99
12	23	4.7e-06	0.00058	20.7	1.7	1	23	543	565	543	565	0.98
13	23	7.2e-05	0.009	17.0	6.0	1	23	571	593	571	593	0.98
14	23	1.9	2.3e+02	3.1	1.7	2	23	945	966	944	966	0.87
15	23	1.7e-05	0.0021	19.0	2.7	1	23	972	994	972	994	0.98
16	23	0.021	2.7	9.2	1.9	2	23	1001	1022	1000	1022	0.97
17	23	2.7e-08	3.4e-06	27.8	1.4	2	23	1096	1117	1095	1117	0.98
18	23	0.00021	0.026	15.5	4.9	1	23	1123	1145	1123	1145	0.99
19	23	0.00028	0.035	15.2	4.0	1	23	1151	1173	1151	1173	0.97
20	23	3.2e-05	0.004	18.1	2.6	1	23	1179	1201	1179	1201	0.98
21	23	2.1e-05	0.0026	18.7	0.7	2	23	1437	1458	1436	1458	0.97
22	23	6.1e-06	0.00076	20.4	4.2	1	23	1464	1486	1464	1486	0.98
23	23	0.0023	0.29	12.2	8.8	1	23	1492	1515	1492	1515	0.98

Sequence Information

Coding Sequence: ATGTCGTTCGCCGTAGACTGCCTGAATTTCGCGCTCCTCTTCATCTGCACGCGCGTGTTCCATCTCGCACTTGGTATCAGCGCTCAATATTATAAGGCCCAATTGGACGCACATTTAAAACTTCACGGAGAAAAGTGGGCGAGTGAGGATGTGCGAAAGTGCAAATTATGCAACAAACAATTCGTGCAGCCCGCACTCTACCGAATGCACATTCGCGAGCATTACAGGCTACAAACGAAGATAGTAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTATAAATGCACCATATGCTTGAAGATTTTCCAAAAACCGAGCCAACTGATGCGACATATCAGAGTACATACCGGAGAAAAGCCCTTTAAGTGTACTATCTGTAACAGGGCGTTCACGCAAAAGAGTTCGTTACAAATTCATACGTGGCAACACAAGGGTATTCGGCCGCATACCTGCAGCCTCTGTAATGCCAAATTTAGTCAAAAAGgaAATTTAAAAGCGCATATACTCAGAGTACACAATGCGCCAGAAGGTGAGCCCACGTATGCCTGTTCTTACTGTTCCTGCATCTTTAAGAAACTGGGTAGCTTAAATGGACACATAAAGCGAATGCATTCTGTTTCCTCGGAGGAATTTGCCGCAAAGTCCTTGGAAGCTAATTCCAGTATCTCATCGGAAGCTGATATGCGCGCGACCGTCGACAGCGTTATATCACAATTAGCATCTTTGGAATCCGTCGTGAACAATACCGCAGATTCCGATATCGCGACGCTAAGTGCAGATCAGAATGATATCCTGCAacaagcattaaaaaatagcGGCTTGCCAAATAAAAACGAAGGCACTTCGAAAGAAACTGCAGAACCGAAGAAGACAGATTCGCCAACGTCGTATGTCACGCTGTTGGACAGAACCGCTGGTGGTACTTCAAGGAAATATCTCACTATAAAACAACGCTGCATAGGAAACGTACGGTGGTATGCATGTTCATTCTGCCCAAAAGAATTCAAAAAGCCATCGGACTTGATACGTCATTTGCGCGTACATACCCAAGAAAAGCCTTTCAagTGCATGTATTGCGTGCGTTCCTTTGCGCTAAAGTCGACAATGATAGCGCACGAGCGAACTCACACCGGAGTGAAGAAATATGCCTGCGATTCCTGCGACAAAACTTTCGCGTGTCATAGCAGCCTTACCGCTCATACGAAATTACACACAAAACCACACAAGTGCAACATATGTGACAAATCATTTAGCGCGAGCACTATTCTAAAAAATCACATGAAAAGCCACACAAAGGAGAAGCCTAAGATATCGCCGGAAGCGGAAAGTTTAGTGCCACAAGTGGTACTGCAAGAACCGCTCGTCATCAGCGATGCCGGTAATAAAATCAGCGTGGCACAAGAGCAGTCGAAACAAAAACAATTGTACGAAAGCGTCGGCGTAACCAGGCCGCACGAGTGTTGGGTCTGTCACGCAGCGTTCAGGAAAGTTAGCCACTTGAAGCAACATTATCGCAGGCACACGGGCGAGCGTCCTTACAAGTGCTCCAAGTGCGACAGGAGATTTACATCAAATAGTGTCCTGAAATCTCACCTGCACACGCACGACGACGCGAGGCCGTACAGTTGTTCAGTATGCGATACGAAATTCTCCACGCAGAGCAGCATGAAGAGACACTTAGTCACACATAGCAATAAAAGACCGTACATGTGTCCGTATTGCCAAAAGACGTTTAAGACGAAAGTCAATTGCCGGAAGCATATAAAAAGGCATATGTACGAGCTGGCGCAACAGCAGTTGGAAGAAAAGACTCAGAATCAAAAAGAGTCCCAACCTTTGAGCGAGAATAAAGAAGCTACTTCAGCGTTACAGGAGAGCATCACTCTCGCCGAAGATATGGAGGTGTCGTTCCAACCGCAAATGGCGCCGGATTTTACGCAGGCTTTCTCCGATCAGTTTCCAAATATCAGCGCGGAGAAGGAGAAATCCTTTTTATTACCGGACAATACAACGCCATCGATAGTGAATCAAAGTTTATCTGTCGACACAACTAATTTAGGAACGCAAACCCTACATGCTGATGAAACCGGTACTATCACATTACCTCATTACTCAGGGGATCAAACTCTCACACCGgaaagCATACGAGAAATTGAAGAAACTCTGAATCAGCAACTCTTTAATATCGGCATGAATCTCGGGCTGGGAACAAATAGTCTACCAAGGCAAATGGACGAGACGAATACGAGTTCTCTCAACAATTCCAGAGAACAACCAGTGctcaatattatatacgaGCAGAAGACTCTGGAATCGTCAGGCAATGCTATATTCATGTCACAATTCGATTCGTTTGATATGAACCAAATTACATTGCAGACGGATAACGATATGGACATCGGTTTAAATCCGAGCAACTCGACGAATATGTCAAGTATTTTGCCCAGATCCATAGGAAACAACCAGCAAGAGGAACAACGAGCAGCTGCTCCAGTTGCAATCACCGCCAGCAATATAGACGCTTCTCAAATTACGAGAAACACTCATTTGGTGGTCATAAATCCTAAAGAGAATTGTTCGGAATTGATGAAACTCTCGCAAGTGTGTCCGTCGAAGTACTCGAAAGTCATCGCGAAGGCGGACACCACAAACGGATCGGAGATACAAAGCACGAATGAACATGAAAAAACAATGCAGAAAAACAATGCTGTGTCGTGTGAAAACGAAAGAAATCCTTTGTTTAtGAAGAATTTCCAAAGCACAATACAGTCGGAAACGCTTGTTTCTTCTGGCATGGTCAGTTCGGTGGAATGTAATACTCTACTGCAGTGTCACATGTGTGGCGATCAAGGTTTCACGACAGAGAGATTGAAGGAACACCTGAAATCTCATCGTGGTGCCAAAGAGTTTGAGTGTTCGGAGTGTTCCCAGCGATTCTGTACAAATGGCGGTCTCAGCAGGCATATGAAGATGCACATGAATAAGCAACGATGGAAATGTACTACCTGCCAAAAGATACTAAGCAGCAAACTGCAATTGAAATACCACAGTAAAATGCATACCGATGTTTGGAATGTTTCATCCACGGAACCGGACAGCTCGCAAAAGGATCTTATTTCTTCGAATTCCGATTTATCGGGGATAACGACACTGGATGTAAAAATTGATCCAAACTCGTCAGTTTCTGAGAAGGTTTTGATGGACGCAGTCGCTGAGAGAAAAACCATGGACCGCGCTGATGAGAACATGGAGAAGAAAGAGACGAGAGAATACactaataaatgtaaatactgTCCGAAAACTTTCCGTAAACCGAGTGATCTCATCAGACACATTCGCACGCATACGGGCGAACGACCATATAAATGCGAACACTGCAGCAAGAGCTTCGCGGTCAAGTGCACTTTGGATTCGCATATGAAGGTTCACACGGGTAAGAAGACGTTCTGCTGCCACGTCTGCAGCAGCATGTTCGCTACGAAGGGCAGTTTAAAGGTCCACATGCGATTGCATACAGGTTCGAAACCATTTAAATGTCCTGTGTGCGATCTCCGATTCCGCACTTCGGGACACAAGAAGGTACACATGTTGAAGCATGCGAGGGAGCATAAGGGTGGCATGAAGCGCAAGCCGAAACATTCGAAGATCGCTGCGGTAGCGGAAGCGGCAGCCAGCCTTGAAAAAATCAGTAATAGTTCTTTGGACAATGCATCAACAACGACGACTCCTATCATGATCAATGAGGCTGTGCCATCGCAGAATCTGGATTATCCCACGCTGGAACAGACAGTGAATCTCGATACCACGGTTCATCTACCGAATCAAATCGCGTTTAACAACACcgacgcgacgacgacgattctCAACAATAATTCTATGCTGTCCGTGAACGAGAACAACGAGCTGGTGGCGAATTTGCAGTTCCTATTAGCGAACGGTCTCGTTACCATTCAAACAGACGACACCCTGTTGACGCAACCTGCGACAAACAGTTCCGATGTCAGCGGAGTACCAACTAATGTGATCGAGTTAGTCAATCCAGATCCTTTTCAGGAAGCTTGTAACCTGGGTAATGCCAATCACATGGTGATCACCAGCCAGGTGCCGACGGAGACGACGACCACAGACACGAGCGCGACAGTTATTCAGATGAATAATTGTATGCCCCCTGTGTCCGTACAGATACAGACCCAAAACCCCGTTGAAGTGCCTGAAGCGAAGACGAGCGATcaaacgacgacgatgatgacaaCGGCAACAACAACTTCAACGGTGAAAACCTCGATGCAGCCTTCAAGGAAAGAGTGCGATGTGTGTGGTAAAACGTTCATGAAGCCATATCAGATGGAACGGCACAAACGCATTCACACGGGGGAACGGCCGTATAAGTGCGAGCAGTGCGGCAAGTCATTCGCGCAGAAATTTACTTTGCAGCTGCATCAGAAGCATCATACTGGTGATCGACCGTACTCCTGCCCGCACTGCAAGCACTTATTCACGCAAAAGTGCAACCTGAAGACGCATCTGAAACGCGTTCACCAGCTGGTCATGCTCGACGTCAAGAAGTTAAAGAGCGGTCAACAGATGCTAGGCGCGCTTCTACAGGACAATCAGGGCGGTGATACCAAACTGCTAAACTTGGATGATATATTGGTGGTAGATTTCCTCAAGTGA
Protein Sequence: MSFAVDCLNFALLFICTRVFHLALGISAQYYKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRMHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKIFQKPSQLMRHIRVHTGEKPFKCTICNRAFTQKSSLQIHTWQHKGIRPHTCSLCNAKFSQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRMHSVSSEEFAAKSLEANSSISSEADMRATVDSVISQLASLESVVNNTADSDIATLSADQNDILQQALKNSGLPNKNEGTSKETAEPKKTDSPTSYVTLLDRTAGGTSRKYLTIKQRCIGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACDSCDKTFACHSSLTAHTKLHTKPHKCNICDKSFSASTILKNHMKSHTKEKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQEQSKQKQLYESVGVTRPHECWVCHAAFRKVSHLKQHYRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDARPYSCSVCDTKFSTQSSMKRHLVTHSNKRPYMCPYCQKTFKTKVNCRKHIKRHMYELAQQQLEEKTQNQKESQPLSENKEATSALQESITLAEDMEVSFQPQMAPDFTQAFSDQFPNISAEKEKSFLLPDNTTPSIVNQSLSVDTTNLGTQTLHADETGTITLPHYSGDQTLTPESIREIEETLNQQLFNIGMNLGLGTNSLPRQMDETNTSSLNNSREQPVLNIIYEQKTLESSGNAIFMSQFDSFDMNQITLQTDNDMDIGLNPSNSTNMSSILPRSIGNNQQEEQRAAAPVAITASNIDASQITRNTHLVVINPKENCSELMKLSQVCPSKYSKVIAKADTTNGSEIQSTNEHEKTMQKNNAVSCENERNPLFMKNFQSTIQSETLVSSGMVSSVECNTLLQCHMCGDQGFTTERLKEHLKSHRGAKEFECSECSQRFCTNGGLSRHMKMHMNKQRWKCTTCQKILSSKLQLKYHSKMHTDVWNVSSTEPDSSQKDLISSNSDLSGITTLDVKIDPNSSVSEKVLMDAVAERKTMDRADENMEKKETREYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCEHCSKSFAVKCTLDSHMKVHTGKKTFCCHVCSSMFATKGSLKVHMRLHTGSKPFKCPVCDLRFRTSGHKKVHMLKHAREHKGGMKRKPKHSKIAAVAEAAASLEKISNSSLDNASTTTTPIMINEAVPSQNLDYPTLEQTVNLDTTVHLPNQIAFNNTDATTTILNNNSMLSVNENNELVANLQFLLANGLVTIQTDDTLLTQPATNSSDVSGVPTNVIELVNPDPFQEACNLGNANHMVITSQVPTETTTTDTSATVIQMNNCMPPVSVQIQTQNPVEVPEAKTSDQTTTMMTTATTTSTVKTSMQPSRKECDVCGKTFMKPYQMERHKRIHTGERPYKCEQCGKSFAQKFTLQLHQKHHTGDRPYSCPHCKHLFTQKCNLKTHLKRVHQLVMLDVKKLKSGQQMLGALLQDNQGGDTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_01423821;
80% Identity: -